FFCP PHASE1:Hg19::chr7:2692417..2692437,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=80727|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=22222|TSSclassifier=W|UniProt=|association_with_transcript=-21bp_to_ENST00000498454_5end|coexpression_cluster_id=C88|description=CAGE_peak_3_at_TTYH3_5end|id=chr7:2692417..2692437,+|ontology_enrichment_celltype=CL:0000148!2.33e-26!10;CL:0000541!2.33e-26!10;CL:0000147!4.17e-24!14;CL:0002567!1.89e-17!3;CL:0000710!1.07e-12!20;CL:0002077!8.97e-12!33;CL:0000453!3.12e-10!5;CL:0000325!8.44e-10!39;CL:0000075!3.79e-09!27;CL:0002566!5.90e-07!1;CL:0000333!7.02e-07!41|ontology_enrichment_celltype_v019=CL:0000148;4.58e-65;10!CL:0000147;2.58e-60;14!CL:0002567;3.37e-41;3!CL:0000710;2.22e-32;20!CL:0000075;7.00e-24;27!CL:0002077;1.04e-16;34!CL:0002566;5.42e-15;1!CL:0000149;3.15e-14;4!CL:0000453;2.29e-11;5|ontology_enrichment_celltype_v019_2=CL:0000148,4.59e-65,10;CL:0000541,4.59e-65,10;CL:0000147,2.58e-60,14;CL:0002567,3.37e-41,3;CL:0000710,2.22e-32,20;CL:0000075,7.00e-24,27;CL:0002077,7.15e-19,34;CL:0002566,5.42e-15,1;CL:0000333,8.09e-15,41;CL:0000149,3.16e-14,4;CL:0000453,1.95e-11,5;CL:0000133,2.76e-10,59;CL:0000221,2.25e-08,72;CL:0000990,9.64e-07,8|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1909!5.45e-12!2|ontology_enrichment_disease_v019=DOID:1909;1.60e-27;2|ontology_enrichment_disease_v019_2=DOID:1909,1.60e-27,2|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766765358330422,0,0,0,0,0.37872730027914,596.816708452097,323.162208022303,629.457691517952,188.179690624976,40.4112046324061,16.5188681814155,96.6093342291354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.89835287767695,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0.0620964029413835,0,0,4.09452617362449,165.569893456081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94860308839388,0.797189041880179,1.96278473107013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37842349302267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@TTYH3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=80727 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22222 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-21bp_to_ENST00000498454_5end | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_3_at_TTYH3_5end | |||
|id=chr7:2692417..2692437,+ | |||
|ontology_enrichment_celltype=CL:0000148!2.33e-26!10;CL:0000541!2.33e-26!10;CL:0000147!4.17e-24!14;CL:0002567!1.89e-17!3;CL:0000710!1.07e-12!20;CL:0002077!8.97e-12!33;CL:0000453!3.12e-10!5;CL:0000325!8.44e-10!39;CL:0000075!3.79e-09!27;CL:0002566!5.90e-07!1;CL:0000333!7.02e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0000148;4.58e-65;10!CL:0000147;2.58e-60;14!CL:0002567;3.37e-41;3!CL:0000710;2.22e-32;20!CL:0000075;7.00e-24;27!CL:0002077;1.04e-16;34!CL:0002566;5.42e-15;1!CL:0000149;3.15e-14;4!CL:0000453;2.29e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.59e-65,10;CL:0000541,4.59e-65,10;CL:0000147,2.58e-60,14;CL:0002567,3.37e-41,3;CL:0000710,2.22e-32,20;CL:0000075,7.00e-24,27;CL:0002077,7.15e-19,34;CL:0002566,5.42e-15,1;CL:0000333,8.09e-15,41;CL:0000149,3.16e-14,4;CL:0000453,1.95e-11,5;CL:0000133,2.76e-10,59;CL:0000221,2.25e-08,72;CL:0000990,9.64e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!5.45e-12!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.60e-27;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.60e-27,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p3@TTYH3 | |||
}} |
Revision as of 00:41, 14 September 2013
Short description: | p3@TTYH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_TTYH3_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -21bp_to_ENST00000498454_5end |
EntrezGene: | TTYH3 |
HGNC: | 22222 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.59e-65 | 10 |
melanoblast | 4.59e-65 | 10 |
pigment cell | 2.58e-60 | 14 |
light melanocyte | 3.37e-41 | 3 |
neurecto-epithelial cell | 2.22e-32 | 20 |
columnar/cuboidal epithelial cell | 7.00e-24 | 27 |
ecto-epithelial cell | 7.15e-19 | 34 |
dark melanocyte | 5.42e-15 | 1 |
migratory neural crest cell | 8.09e-15 | 41 |
visual pigment cell | 3.16e-14 | 4 |
Langerhans cell | 1.95e-11 | 5 |
neurectodermal cell | 2.76e-10 | 59 |
ectodermal cell | 2.25e-08 | 72 |
conventional dendritic cell | 9.64e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.60e-27 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.