FFCP PHASE1:Hg19::chr7:41728981..41729000,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:41728981..41729000,-|id=chr7:41728981..41729000,-|ontology_enrichment_celltype=CL:0000192!3.83e-08!42;CL:0000514!3.83e-08!42;CL:0000680!7.62e-08!57;CL:0000056!7.62e-08!57;CL:0000355!7.62e-08!57;CL:0000359!7.81e-08!32;CL:0000187!2.90e-07!54;CL:0000055!3.96e-07!180|ontology_enrichment_celltype_v019=CL:0002539;1.82e-13;10!CL:0002593;1.89e-11;2!CL:0002541;6.46e-08;3!CL:0000359;1.68e-07;32!CL:0002616;4.20e-07;1!CL:0000511;4.84e-07;1!CL:0002625;4.84e-07;1!CL:0000216;4.84e-07;1|ontology_enrichment_celltype_v019_2=CL:0002539,2.03e-13,10;CL:0002593,3.23e-11,2;CL:0002541,5.64e-08,3;CL:0000359,2.74e-07,32;CL:0002616,4.09e-07,1;CL:0000511,5.13e-07,1;CL:0002625,5.13e-07,1;CL:0000216,5.13e-07,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2394;2.46e-09;14!DOID:1192;3.60e-08;3!DOID:3571;4.84e-07;1|ontology_enrichment_disease_v019_2=DOID:2394,1.97e-09,14;DOID:1192,2.15e-08,3;DOID:3571,4.85e-07,1;DOID:3369,7.60e-07,1;DOID:4235,9.48e-07,1|ontology_enrichment_uberon=UBERON:0000914!3.50e-08!83;UBERON:0002329!3.50e-08!83;UBERON:0003077!3.50e-08!83;UBERON:0003059!3.50e-08!83;UBERON:0007282!3.50e-08!83;UBERON:0009618!3.50e-08!83;UBERON:0007285!3.50e-08!83;UBERON:0005256!3.59e-07!143;UBERON:0000486!3.77e-07!82;UBERON:0001637!4.39e-07!42;UBERON:0003509!4.39e-07!42;UBERON:0004572!4.39e-07!42;UBERON:0004573!6.11e-07!33;UBERON:0004571!6.11e-07!33;UBERON:0001134!8.08e-07!61;UBERON:0002036!8.08e-07!61;UBERON:0003082!8.08e-07!61|ontology_enrichment_uberon_v019=UBERON:0004237;1.82e-13;10!UBERON:0004695;1.82e-13;10!UBERON:0002111;1.82e-13;10!UBERON:0004178;1.82e-13;10!UBERON:0002456;1.89e-11;2!UBERON:0002118;2.65e-10;5!UBERON:0001135;6.87e-09;15!UBERON:0003124;6.46e-08;3!UBERON:0000920;6.46e-08;3!UBERON:0001136;4.84e-07;1!UBERON:0001343;4.84e-07;1!UBERON:0004910;4.84e-07;1!UBERON:0004813;4.84e-07;1!UBERON:0004573;5.15e-07;33!UBERON:0004571;5.15e-07;33!UBERON:0000992;9.60e-07;13|ontology_enrichment_uberon_v019_2=UBERON:0004237,2.03e-13,10;UBERON:0004695,2.03e-13,10;UBERON:0002111,2.03e-13,10;UBERON:0004178,2.03e-13,10;UBERON:0002456,3.23e-11,2;UBERON:0002118,2.54e-10,5;UBERON:0001135,7.38e-09,15;UBERON:0000920,5.64e-08,3;UBERON:0003124,3.36e-07,7;UBERON:0004573,4.85e-07,33;UBERON:0004571,4.85e-07,33;UBERON:0001136,5.13e-07,1;UBERON:0001343,5.13e-07,1;UBERON:0004910,5.13e-07,1;UBERON:0005154,5.13e-07,1;UBERON:0005295,5.13e-07,1;UBERON:0004813,5.13e-07,1;UBERON:0005297,5.13e-07,1;UBERON:0005294,5.13e-07,1;UBERON:0010141,5.13e-07,1;UBERON:0005891,5.13e-07,1;UBERON:0000992,9.34e-07,13|phase1_expression=0.181678379270557,0.856402095563933,0.704772020479856,0,1.34088328328186,4.36169262050184,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,1.34465029290355,0.602694528023977,2.19093027116212,2.43966399395253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0.822335776043652,0.619412741790207,0,0.256160706529101,0,0.344745680736619,0,0,0.188242339542605,0,0,0.612167784741805,0,0.639337125799041,0,0,0,0.580418477257168,0,0.622822248995575,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,1.15877215168659,0.795285947051099,2.43317435151318,0.0945348171640679,0.665188192387692,0.175669571386252,0,0,0.370784442784429,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,1.98788780678127,0.759783069987479,0.397227542439656,0,0,0,0,1.48000529050296,0,0,0,0,1.15235184896,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0.122834317311768,0,0,1.97813543422845,0,0,0,0,0,0,0.612975591598039,0.45071417671979,0.113432183160021,0.538168907066586,0,0,0,0,0.772921620136887,0,0.337552664482532,0,0,0,0,0,0.201504196455281,0,0.773043412653187,0.818238361772504,0.286804595389004,0,0,0,0,0.252320850875628,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.658501712451753,0,0,0.555530670951178,0,0,0,0,0.939269553886573,0,0.462985512576611,0,0,0,0,0,0,0.93733833986777,0.503946384596579,0.708875486211932,0.626909658919938,0,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,1.03417372606222,0,0,0,1.04007436911366,0,0,0,0.57191197463259,0,0,0.977208552881205,0,0,0,0,0,0,0,0,0.718874566474748,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.713715955188647,0.788512075169673,0.117141414992713,0,0,0,1.99267679560631,0.184369168541703,0,0,0,0,0,0,0,0,0,0.248107807818777,0.920771839728375,1.12264037773229,0.640695746278505,0,3.69964018630297,0,1.54209693802656,0.532685175939381,0,0,0.813472649219715,0,0.802025881213139,0,0,0.364182336013434,0.131124414959424,0,0.0770153371044148,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:41728981..41729000,- | |||
|id=chr7:41728981..41729000,- | |||
|ontology_enrichment_celltype=CL:0000192!3.83e-08!42;CL:0000514!3.83e-08!42;CL:0000680!7.62e-08!57;CL:0000056!7.62e-08!57;CL:0000355!7.62e-08!57;CL:0000359!7.81e-08!32;CL:0000187!2.90e-07!54;CL:0000055!3.96e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002539;1.82e-13;10!CL:0002593;1.89e-11;2!CL:0002541;6.46e-08;3!CL:0000359;1.68e-07;32!CL:0002616;4.20e-07;1!CL:0000511;4.84e-07;1!CL:0002625;4.84e-07;1!CL:0000216;4.84e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002539,2.03e-13,10;CL:0002593,3.23e-11,2;CL:0002541,5.64e-08,3;CL:0000359,2.74e-07,32;CL:0002616,4.09e-07,1;CL:0000511,5.13e-07,1;CL:0002625,5.13e-07,1;CL:0000216,5.13e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;2.46e-09;14!DOID:1192;3.60e-08;3!DOID:3571;4.84e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.97e-09,14;DOID:1192,2.15e-08,3;DOID:3571,4.85e-07,1;DOID:3369,7.60e-07,1;DOID:4235,9.48e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.50e-08!83;UBERON:0002329!3.50e-08!83;UBERON:0003077!3.50e-08!83;UBERON:0003059!3.50e-08!83;UBERON:0007282!3.50e-08!83;UBERON:0009618!3.50e-08!83;UBERON:0007285!3.50e-08!83;UBERON:0005256!3.59e-07!143;UBERON:0000486!3.77e-07!82;UBERON:0001637!4.39e-07!42;UBERON:0003509!4.39e-07!42;UBERON:0004572!4.39e-07!42;UBERON:0004573!6.11e-07!33;UBERON:0004571!6.11e-07!33;UBERON:0001134!8.08e-07!61;UBERON:0002036!8.08e-07!61;UBERON:0003082!8.08e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;1.82e-13;10!UBERON:0004695;1.82e-13;10!UBERON:0002111;1.82e-13;10!UBERON:0004178;1.82e-13;10!UBERON:0002456;1.89e-11;2!UBERON:0002118;2.65e-10;5!UBERON:0001135;6.87e-09;15!UBERON:0003124;6.46e-08;3!UBERON:0000920;6.46e-08;3!UBERON:0001136;4.84e-07;1!UBERON:0001343;4.84e-07;1!UBERON:0004910;4.84e-07;1!UBERON:0004813;4.84e-07;1!UBERON:0004573;5.15e-07;33!UBERON:0004571;5.15e-07;33!UBERON:0000992;9.60e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,2.03e-13,10;UBERON:0004695,2.03e-13,10;UBERON:0002111,2.03e-13,10;UBERON:0004178,2.03e-13,10;UBERON:0002456,3.23e-11,2;UBERON:0002118,2.54e-10,5;UBERON:0001135,7.38e-09,15;UBERON:0000920,5.64e-08,3;UBERON:0003124,3.36e-07,7;UBERON:0004573,4.85e-07,33;UBERON:0004571,4.85e-07,33;UBERON:0001136,5.13e-07,1;UBERON:0001343,5.13e-07,1;UBERON:0004910,5.13e-07,1;UBERON:0005154,5.13e-07,1;UBERON:0005295,5.13e-07,1;UBERON:0004813,5.13e-07,1;UBERON:0005297,5.13e-07,1;UBERON:0005294,5.13e-07,1;UBERON:0010141,5.13e-07,1;UBERON:0005891,5.13e-07,1;UBERON:0000992,9.34e-07,13 | |||
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| |||
|short_description=p@chr7:41728981..41729000,- | |||
}} |
Revision as of 01:13, 14 September 2013
Short description: | p@chr7:41728981..41729000, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:41728981..41729000, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 2.03e-13 | 10 |
smooth muscle cell of the internal thoracic artery | 3.23e-11 | 2 |
chorionic membrane mesenchymal stem cell | 5.64e-08 | 3 |
vascular associated smooth muscle cell | 2.74e-07 | 32 |
perirenal adipocyte cell | 4.09e-07 | 1 |
androgen binding protein secreting cell | 5.13e-07 | 1 |
seminiferous tubule epithelial cell | 5.13e-07 | 1 |
Sertoli cell | 5.13e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
blood vessel smooth muscle | 2.03e-13 | 10 |
arterial system smooth muscle | 2.03e-13 | 10 |
artery smooth muscle tissue | 2.03e-13 | 10 |
aorta smooth muscle tissue | 2.03e-13 | 10 |
internal thoracic artery | 3.23e-11 | 2 |
right ovary | 2.54e-10 | 5 |
smooth muscle tissue | 7.38e-09 | 15 |
egg chorion | 5.64e-08 | 3 |
chorion | 3.36e-07 | 7 |
systemic artery | 4.85e-07 | 33 |
systemic arterial system | 4.85e-07 | 33 |
mesothelium | 5.13e-07 | 1 |
seminiferous tubule of testis | 5.13e-07 | 1 |
epithelium of male gonad | 5.13e-07 | 1 |
epithelial cord | 5.13e-07 | 1 |
sex cord | 5.13e-07 | 1 |
seminiferous tubule epithelium | 5.13e-07 | 1 |
testis sex cord | 5.13e-07 | 1 |
genital ridge | 5.13e-07 | 1 |
primitive sex cord of indifferent gonad | 5.13e-07 | 1 |
coelomic epithelium | 5.13e-07 | 1 |
female gonad | 9.34e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.97e-09 | 14 |
peripheral nervous system neoplasm | 2.15e-08 | 3 |
liver cancer | 4.85e-07 | 1 |
peripheral primitive neuroectodermal tumor | 7.60e-07 | 1 |
spindle cell sarcoma | 9.48e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.