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FFCP PHASE1:Mm9::chr4:105988792..105988848,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=329908|HGNC=|UniProt=B1AY13,E9PV45|association_with_transcript=0bp_to_ENSMUST00000094933,ENSMUST00000106798,ENSMUST00000165709,NM_183225,uc008tyf.2,uc008tyh.2_5end|description=CAGE_peak_1_at_Usp24_5end|id=chr4:105988792..105988848,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003929!1.53e-13!55;UBERON:0005911!6.71e-13!69;UBERON:0005057!7.51e-13!51;UBERON:0000077!2.46e-10!97;UBERON:0001041!7.25e-10!92;UBERON:0004921!5.45e-09!126;UBERON:0004185!5.45e-09!126;UBERON:0002365!1.63e-08!25;UBERON:0002330!1.63e-08!25;UBERON:0004119!1.83e-08!130;UBERON:0000925!1.83e-08!130;UBERON:0006595!1.83e-08!130;UBERON:0001007!3.10e-08!128;UBERON:0001555!3.10e-08!128;UBERON:0007026!3.10e-08!128;UBERON:0002405!3.11e-08!70;UBERON:0000490!6.01e-08!66;UBERON:0001048!1.75e-07!147;UBERON:0002107!1.92e-07!22;UBERON:0007499!1.92e-07!22;UBERON:0006925!1.92e-07!22;UBERON:0009497!1.92e-07!22;UBERON:0000015!1.92e-07!22;UBERON:0002423!1.92e-07!22;UBERON:0006235!1.92e-07!22;UBERON:0008835!1.92e-07!22;UBERON:0003894!1.92e-07!22;UBERON:0004161!1.92e-07!22;UBERON:0008836!1.92e-07!22;UBERON:0009854!3.01e-07!23;UBERON:0009856!3.01e-07!23;UBERON:0003104!7.00e-07!131;UBERON:0009142!7.00e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0003929,1.53e-13,55;UBERON:0005911,6.71e-13,69;UBERON:0001041,2.42e-10,80;UBERON:0004921,4.31e-09,114;UBERON:0004119,1.60e-08,118;UBERON:0000925,1.60e-08,118;UBERON:0006595,1.60e-08,118;UBERON:0002365,1.63e-08,25;UBERON:0002330,1.63e-08,25;UBERON:0001007,2.68e-08,116;UBERON:0001555,2.68e-08,116;UBERON:0007026,2.68e-08,116;UBERON:0000490,6.01e-08,66;UBERON:0002107,1.92e-07,22;UBERON:0007499,1.92e-07,22;UBERON:0006925,1.92e-07,22;UBERON:0009497,1.92e-07,22;UBERON:0000015,1.92e-07,22;UBERON:0002423,1.92e-07,22;UBERON:0006235,1.92e-07,22;UBERON:0008835,1.92e-07,22;UBERON:0003894,1.92e-07,22;UBERON:0004161,1.92e-07,22;UBERON:0008836,1.92e-07,22;UBERON:0009854,3.01e-07,23;UBERON:0009856,3.01e-07,23;UBERON:0001048,3.54e-07,134;UBERON:0000077,5.29e-07,35|phase1_expression=13.9329496981171,16.40184415905,14.1049764210756,21.4749590027849,16.5295590882295,25.6855286025191,16.3528848416868,31.2478442728615,26.609068486665,20.8317428426574,17.4642327590015,18.9060016818947,38.1777627746589,39.8637035030628,22.9845735652807,27.1316858302367,24.4846657344851,24.9215110633008,32.9074640653773,27.1609377150739,15.6479653877968,11.8156231929054,11.4927907221132,8.31960598525715,9.63518980482114,10.3361753540704,19.8150518233174,12.7128027284675,9.31114755336232,14.617747526076,8.64748991555688,15.8757668364908,7.99584223859941,0,25.1300909183609,23.4390849955474,33.6879437832909,10.0447591376858,12.5013655123808,11.5175223674236,12.3528612486513,13.6609096991689,14.0798002379035,6.54663453473002,6.18399280439039,6.42413632565885,4.69434806608824,5.01457859675027,5.27246838562732,7.58276606389705,4.89952475688769,2.87505128729943,28.3552604237574,35.5427449585559,38.3146931022409,6.17422646486273,14.0401385569991,8.25075347643908,10.1158230429799,7.40587370980846,12.0427966666174,6.09920157724438,4.4464739805557,6.74924787961049,6.92206453796882,4.2628806896766,6.2916023208865,6.53171119046643,17.1087860308988,8.77538599155989,10.0955981448663,10.2834354385369,4.63823935998388,12.4940615199253,10.6388472830242,11.0306254393203,14.3150645299205,16.8547286272448,15.9750794586493,11.6059933202571,11.4359554503012,11.4600941522487,10.0505879640497,19.1339287410771,16.6550090076723,13.8475435172624,16.7998583342941,13.2343606535963,16.2054053733014,17.0036010240267,22.3195656300292,27.5335640634044,10.879541339324,29.1439723484421,18.1937396885347,24.6414787903535,20.2239964989723,6.30592193538814,5.19572009205738,6.71345191569646,12.3942209403479,10.2661181931454,0,14.2213340630666,9.74209684550464,10.8944742154292,8.59391556525132,22.2658565452167,22.0097201100096,20.9303416081403,11.450031566565,9.13396434936424,11.3001593655469,10.7013074792362,12.4644029563847,14.9543243682314,11.3709685157812,19.0871151134283,20.3460426948471,22.4855921426899,24.7342500675641,20.8496358848145,14.9113408974498,17.5668478206928,22.2013509222262,13.2837668708468,16.4146720573111,10.1983464268879,12.3258120260873,14.379901382863,13.2675174817402,11.8115090986093,13.5582969749976,19.4343747571051,12.4672826735736,15.5751612545047,11.7115268427864,20.1539292388351,8.59257378674494,15.993581047372,11.9710807525687,12.1848115349741,9.54329287968351,12.0563854268572,17.009124787832,14.2206229516183,15.7418897260344,16.298312356558,9.7005596819779,11.535470890237,14.0760899331159,9.86380795924087,10.5657954705727,14.626590993931,11.3180175024369,10.1507476077432,4.21327912387941,6.94839349209731,13.3556844715929,15.1201813950916,10.7881987591304,12.9644684251931,15.6251525486239,12.7896750635812,16.3523139660621,16.9749779667798,20.6570519077707,20.0836388871532,24.0257380873681,21.1776028662033,30.4818723892418,31.28679730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|EntrezGene=329908
|HGNC=
|UniProt=B1AY13,E9PV45
|association_with_transcript=0bp_to_ENSMUST00000094933,ENSMUST00000106798,ENSMUST00000165709,NM_183225,uc008tyf.2,uc008tyh.2_5end
|description=CAGE_peak_1_at_Usp24_5end
|id=chr4:105988792..105988848,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003929!1.53e-13!55;UBERON:0005911!6.71e-13!69;UBERON:0005057!7.51e-13!51;UBERON:0000077!2.46e-10!97;UBERON:0001041!7.25e-10!92;UBERON:0004921!5.45e-09!126;UBERON:0004185!5.45e-09!126;UBERON:0002365!1.63e-08!25;UBERON:0002330!1.63e-08!25;UBERON:0004119!1.83e-08!130;UBERON:0000925!1.83e-08!130;UBERON:0006595!1.83e-08!130;UBERON:0001007!3.10e-08!128;UBERON:0001555!3.10e-08!128;UBERON:0007026!3.10e-08!128;UBERON:0002405!3.11e-08!70;UBERON:0000490!6.01e-08!66;UBERON:0001048!1.75e-07!147;UBERON:0002107!1.92e-07!22;UBERON:0007499!1.92e-07!22;UBERON:0006925!1.92e-07!22;UBERON:0009497!1.92e-07!22;UBERON:0000015!1.92e-07!22;UBERON:0002423!1.92e-07!22;UBERON:0006235!1.92e-07!22;UBERON:0008835!1.92e-07!22;UBERON:0003894!1.92e-07!22;UBERON:0004161!1.92e-07!22;UBERON:0008836!1.92e-07!22;UBERON:0009854!3.01e-07!23;UBERON:0009856!3.01e-07!23;UBERON:0003104!7.00e-07!131;UBERON:0009142!7.00e-07!131
|ontology_enrichment_uberon_v019_2=UBERON:0003929,1.53e-13,55;UBERON:0005911,6.71e-13,69;UBERON:0001041,2.42e-10,80;UBERON:0004921,4.31e-09,114;UBERON:0004119,1.60e-08,118;UBERON:0000925,1.60e-08,118;UBERON:0006595,1.60e-08,118;UBERON:0002365,1.63e-08,25;UBERON:0002330,1.63e-08,25;UBERON:0001007,2.68e-08,116;UBERON:0001555,2.68e-08,116;UBERON:0007026,2.68e-08,116;UBERON:0000490,6.01e-08,66;UBERON:0002107,1.92e-07,22;UBERON:0007499,1.92e-07,22;UBERON:0006925,1.92e-07,22;UBERON:0009497,1.92e-07,22;UBERON:0000015,1.92e-07,22;UBERON:0002423,1.92e-07,22;UBERON:0006235,1.92e-07,22;UBERON:0008835,1.92e-07,22;UBERON:0003894,1.92e-07,22;UBERON:0004161,1.92e-07,22;UBERON:0008836,1.92e-07,22;UBERON:0009854,3.01e-07,23;UBERON:0009856,3.01e-07,23;UBERON:0001048,3.54e-07,134;UBERON:0000077,5.29e-07,35
|phase1_expression=13.9329496981171,16.40184415905,14.1049764210756,21.4749590027849,16.5295590882295,25.6855286025191,16.3528848416868,31.2478442728615,26.609068486665,20.8317428426574,17.4642327590015,18.9060016818947,38.1777627746589,39.8637035030628,22.9845735652807,27.1316858302367,24.4846657344851,24.9215110633008,32.9074640653773,27.1609377150739,15.6479653877968,11.8156231929054,11.4927907221132,8.31960598525715,9.63518980482114,10.3361753540704,19.8150518233174,12.7128027284675,9.31114755336232,14.617747526076,8.64748991555688,15.8757668364908,7.99584223859941,0,25.1300909183609,23.4390849955474,33.6879437832909,10.0447591376858,12.5013655123808,11.5175223674236,12.3528612486513,13.6609096991689,14.0798002379035,6.54663453473002,6.18399280439039,6.42413632565885,4.69434806608824,5.01457859675027,5.27246838562732,7.58276606389705,4.89952475688769,2.87505128729943,28.3552604237574,35.5427449585559,38.3146931022409,6.17422646486273,14.0401385569991,8.25075347643908,10.1158230429799,7.40587370980846,12.0427966666174,6.09920157724438,4.4464739805557,6.74924787961049,6.92206453796882,4.2628806896766,6.2916023208865,6.53171119046643,17.1087860308988,8.77538599155989,10.0955981448663,10.2834354385369,4.63823935998388,12.4940615199253,10.6388472830242,11.0306254393203,14.3150645299205,16.8547286272448,15.9750794586493,11.6059933202571,11.4359554503012,11.4600941522487,10.0505879640497,19.1339287410771,16.6550090076723,13.8475435172624,16.7998583342941,13.2343606535963,16.2054053733014,17.0036010240267,22.3195656300292,27.5335640634044,10.879541339324,29.1439723484421,18.1937396885347,24.6414787903535,20.2239964989723,6.30592193538814,5.19572009205738,6.71345191569646,12.3942209403479,10.2661181931454,0,14.2213340630666,9.74209684550464,10.8944742154292,8.59391556525132,22.2658565452167,22.0097201100096,20.9303416081403,11.450031566565,9.13396434936424,11.3001593655469,10.7013074792362,12.4644029563847,14.9543243682314,11.3709685157812,19.0871151134283,20.3460426948471,22.4855921426899,24.7342500675641,20.8496358848145,14.9113408974498,17.5668478206928,22.2013509222262,13.2837668708468,16.4146720573111,10.1983464268879,12.3258120260873,14.379901382863,13.2675174817402,11.8115090986093,13.5582969749976,19.4343747571051,12.4672826735736,15.5751612545047,11.7115268427864,20.1539292388351,8.59257378674494,15.993581047372,11.9710807525687,12.1848115349741,9.54329287968351,12.0563854268572,17.009124787832,14.2206229516183,15.7418897260344,16.298312356558,9.7005596819779,11.535470890237,14.0760899331159,9.86380795924087,10.5657954705727,14.626590993931,11.3180175024369,10.1507476077432,4.21327912387941,6.94839349209731,13.3556844715929,15.1201813950916,10.7881987591304,12.9644684251931,15.6251525486239,12.7896750635812,16.3523139660621,16.9749779667798,20.6570519077707,20.0836388871532,24.0257380873681,21.1776028662033,30.4818723892418,31.2867973090211,23.2723122208514,30.7332698961251,14.7202963994889,15.7444056940305,12.2254949704005,14.2803305998314,11.5175655289026,12.7730169523241,12.8867461322093,14.3195302482573,9.56225588532942,10.2721838100782,15.6594590309689,11.1995289212327,14.8287773192159,12.1363447945102,12.8676297498619,16.178749355776,16.8587678902262,16.1304431336037,4.74169752382704,12.9100819248994,10.1436962105772,12.0154283428735,16.0980564349129,23.1448205638051,26.4961090550638,27.8983179681448,28.5737684671302,37.142546340462,31.1275258441506,20.6887931087957,19.4593405162071,21.3619006765611,25.7632354163399,24.8412474544989,18.8423130318251,18.1248566594011,24.9688249233554,17.8464918572253,21.5652309791032,17.4906245404197,22.1546747911338,20.4588891137161,23.1422663443267,31.3588288886189,16.9972934953276,12.6959245886225,9.4519686336375,16.2955282344181,12.6732734075791,11.0554129911598,13.5684875305028,20.0987657293533,16.2364198429377,16.6098517236581,22.6425771493632,20.8106409688987,18.8226630233826,21.2634116114822,7.53956419696361,11.9659250440116,20.1623351937805,24.5583704211212,12.36239542906,13.9481907044722,6.22952792431367,33.3261623909772,8.83423014365519,9.76096860741596,6.24727853425117,8.84184552424442,13.3679204449436,12.4553673547086,8.50102473517278,9.9366991689846,12.2539211163422,16.0660658210904,15.8972895433261,6.41036173202119,14.0082785044075,17.6518031580613,19.9117707509944,9.95400608235424,7.86041248108353,9.8074641473067,9.15435867930396,15.9866276930842,17.8315522286073,14.1778154496227,15.6858846489277,23.0706833293146,31.6255825724996,23.721174947083,11.234506989875,9.00305470156551,4.13947788104814,13.9319072770535,10.1083933176096,13.0209236849512,11.0247843803421,6.39376393140658,20.6511103096065,14.8282449604674,15.6575162619023,23.5787341706316,18.4069446433332,19.2398230520817,17.1896175364517,14.1161173780753,19.5292160542,14.6485988588303,25.8015030004758,9.49379592630823,18.8898417917106,22.7925832975676,27.4755397719261,24.7080427063044,21.5872606092196,19.5932033253121,21.5591959134901,1.90934123603023,9.64824780422463,13.0124458961183,14.2567049884778,13.381650944926,17.0322799722019,16.1837215661785,18.7623344496513,18.5846718808661,21.5160855664376,23.6108938973032,10.1464728963154,11.9613236835183,8.10746603239778,12.6393272423631,12.3993430538622,11.3200604078821,9.38857909166032,18.6192270326849,18.0358072412223,13.2871266454303,15.5536203379247,17.3806116345498,15.0016659314722,14.5849559174055,17.7991527479579,18.6187763494181,19.2720914137827,26.3228034448732,22.1534290761866,23.4242163879703,28.1203116556949,25.1057200990733,25.4365068730754,29.6332472252215,32.4917788064762,29.2482194863623,21.5326374772843,31.6689913831449,21.489230894602,17.0006842748328,17.6421526924111,14.8352815656485,17.7925754635625,13.0408747049194,15.8130515932779,14.2700823317225,20.0513429703789,18.2164373284309,9.59115527678899,14.3524840504043,14.1754725048679,10.3573876741571,17.672553950384,10.8729665467882,10.3787347584177,15.1629451892392,12.4635532200518,14.5864030240976,8.80375283037526,10.4790799816508,10.0011027510727,9.88968274746692,15.0832028508153,12.1294661646623,9.63221339582911,13.0152175556393,14.327150642892,14.2776089862858,17.4029470935508,18.0991602687568,18.6573764771217,18.7121943849794,20.192209139362,15.7502844543805,10.2860775715625,12.7782580434723,16.9289694862598,13.0811774969096,17.5984541376668,15.3152440283934,13.5366699925852,9.99664903463803,16.8397101168869,10.661703161497,14.3548371930251,18.5188426866059,20.4615521584845,13.479505183179,13.3105561576988,14.2392029424629,14.5037597236153,14.396360621236,11.6685882561994,14.559033661888,18.0856911783929
|short_description=p1@Usp24
}}

Revision as of 03:19, 14 September 2013

Short description:p1@Usp24
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Usp24_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000094933, ENSMUST00000106798, ENSMUST00000165709, NM_183225, uc008tyf.2, uc008tyh.2_5end
EntrezGene:Usp24
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Usp24

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G713.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I516.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I614.10
CD326+ enterocyte, pool1.CNhs13542.11848-124I321.47
CD326+ enterocyte, pool2.CNhs13197.11849-124I416.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I725.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I816.35
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E931.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E726.61
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F220.83
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E617.46
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F118.91
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E438.18
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E839.86
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A122.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A327.13
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A524.48
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A224.92
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A432.91
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A627.16
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.65
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H211.82
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I911.49
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D29.64
GP2+ M cell, pool1.CNhs13228.11845-124H910.34
GP2+ M cell, pool2.CNhs13231.11846-124I119.82
GP2+ M cell, pool3.CNhs13240.11847-124I212.71
Ileum epithelium, pool1.CNhs13199.10252-104B99.31
Ileum epithelium, pool2.CNhs13232.10253-104C114.62
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C88.65
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I315.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F525.13
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F623.44
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F733.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G810.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H112.50
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H311.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G912.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H213.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H414.08
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.55
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.18
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.42
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.01
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.27
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.90
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A228.36
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I935.54
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A138.31
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.17
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E114.04
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.25
Mouse Granule cells, donor1.CNhs12131.11713-123C310.12
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C712.04
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.10
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C86.29
Mouse Microglia, donor2.CNhs12634.11736-123E86.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D517.11
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D212.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F210.64
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D314.32
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.85
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.61
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.44
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.05
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I616.66
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.85
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.80
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.23
Mouse Schwann, donor1.CNhs12507.11728-123D916.21
Mouse Schwann, donor2.CNhs12573.11746-123F917.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G322.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F727.53
Mouse hepatocyte, donor1.CNhs13078.11714-123C410.88
Mouse hepatocyte, donor3.CNhs12615.11637-122C829.14
Mouse hepatocyte, donor6.CNhs13090.11822-124F418.19
Mouse hepatocyte, donor8.CNhs13091.11824-124F624.64
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A720.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.31
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G19.74
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G210.89
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G38.59
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B622.27
accessory axillary lymph node, adult.CNhs10475.1063-29H922.01
adrenal gland, adult.CNhs10508.49-24D720.93
adrenal gland, embryo E14.CNhs11038.406-44C511.45
adrenal gland, embryo E16.CNhs11004.1254-43D69.13
adrenal gland, embryo E17.CNhs11043.1263-45I111.30
adrenal gland, embryo E18.CNhs11026.1262-18F510.70
adrenal gland, neonate N00.CNhs11191.1311-23C112.46
adrenal gland, neonate N25.CNhs11223.1377-27I314.95
amnion, adult pregnant day17.5.CNhs10488.583-22A811.37
aorta, adult.CNhs10498.46-23H119.09
bone (os femoris), adult.CNhs10483.56-12G220.35
bone (os femoris), neonate N02.CNhs11227.1985-43F522.49
bone (os femoris), neonate N16.CNhs11225.1525-43A624.73
bone (os femoris), neonate N20.CNhs11195.1350-25C320.85
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B217.57
cerebellum, neonate N30.CNhs11135.1395-42I222.20
colon, adult.CNhs10468.36-18H713.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C716.41
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D110.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D412.33
corpora quadrigemina, adult.CNhs10501.16-22A414.38
corpus striatum, adult.CNhs10487.19-21D813.27
corpus striatum, neonate N00.CNhs11226.630-43F111.81
cortex, adult.CNhs10473.12-14D513.56
cortex, neonate N30.CNhs11107.1392-42F219.43
diencephalon, adult.CNhs10482.20-12F212.47
diencephalon, neonate N30.CNhs11201.1388-42B215.58
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A220.15
epididymis, adult.CNhs10490.58-23B28.59
eyeball, adult.CNhs10484.31-12G415.99
eyeball, embryo E12.CNhs11016.345-16C611.97
eyeball, embryo E14.CNhs10521.399-16E212.18
eyeball, embryo E15.CNhs10593.426-16C99.54
eyeball, embryo E17.CNhs11023.1261-18D412.06
eyeball, neonate N00.CNhs11207.633-15C617.01
eyeball, neonate N01.CNhs11140.1532-43E714.22
eyeball, neonate N02.CNhs11205.1551-44G815.74
eyeball, neonate N16.CNhs11188.777-19A216.30
forelimb, embryo E11.CNhs10596.335-25E29.70
forelimb, embryo E12.CNhs10600.359-14H211.54
forelimb, embryo E13.CNhs10589.384-1E214.08
forelimb, embryo E14.CNhs10577.413-26A89.86
forelimb, embryo E15.CNhs11007.437-20E710.57
forelimb, embryo E17.CNhs10598.1517-43C414.63
forelimb, embryo E18.CNhs11008.1520-43B511.32
gonad, embryo E13.CNhs11044.1564-45I610.15
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.95
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D513.36
heart, embryo E11.CNhs10586.331-24E915.12
heart, embryo E12.CNhs11015.353-12F510.79
heart, embryo E13.CNhs11013.376-3I912.96
heart, embryo E14.CNhs10597.403-26D415.63
heart, embryo E15.CNhs11017.431-16C812.79
heart, embryo E16.CNhs11021.457-17C616.35
heart, embryo E17.CNhs11025.479-18E516.97
heart, embryo E18.CNhs11030.1283-20G320.66
heart, neonate N00.CNhs11213.639-21E320.08
heart, neonate N03.CNhs11221.1349-25I224.03
heart, neonate N10.CNhs11118.749-24G121.18
heart, neonate N16.CNhs11209.782-15G130.48
heart, neonate N20.CNhs11127.821-26I631.29
heart, neonate N25.CNhs11196.1351-25D323.27
heart, neonate N30.CNhs11202.1390-42D230.73
hippocampus, adult.CNhs10478.13-16E814.72
hippocampus, neonate N00.CNhs11228.627-43G115.74
intestinal mucosa, adult.CNhs10506.860-29I312.23
intestine, adult.CNhs10496.178-9A314.28
intestine, embryo E12.CNhs11019.1251-16I511.52
intestine, embryo E13.CNhs11010.381-16D512.77
intestine, embryo E15.CNhs10602.976-16D812.89
intestine, embryo E16.CNhs10585.463-22H414.32
intestine, embryo E17.CNhs10582.482-18D39.56
intestine, embryo E18.CNhs10526.1289-20F710.27
intestine, neonate N00.CNhs11126.644-26D115.66
intestine, neonate N01.CNhs11192.1322-23E911.20
intestine, neonate N06.CNhs11102.688-20B814.83
intestine, neonate N07.CNhs11095.720-20F212.14
intestine, neonate N10.CNhs11098.755-23A512.87
intestine, neonate N20.CNhs11187.827-18D116.18
intestine, neonate N25.CNhs11121.1352-25E316.86
intestine, neonate N30.CNhs11131.1384-42G116.13
kidney, embryo E14.CNhs10606.411-4I94.74
kidney, embryo E15.CNhs10997.434-16F812.91
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I212.02
kidney, embryo E18.CNhs11001.1288-20C716.10
kidney, neonate N00.CNhs11214.646-21G723.14
kidney, neonate N10.CNhs11206.758-6D526.50
kidney, neonate N20.CNhs11113.832-19I127.90
kidney, neonate N25.CNhs11122.1353-25F328.57
kidney, neonate N30.CNhs11203.1385-42H137.14
liver, adult pregnant day01.CNhs10466.508-5B231.13
liver, embryo E12.CNhs10601.355-15F820.69
liver, embryo E13.CNhs10524.378-3H619.46
liver, embryo E14.CNhs10594.409-16E121.36
liver, embryo E15.CNhs10520.433-16D725.76
liver, embryo E16.CNhs10523.462-17F524.84
liver, embryo E17.CNhs10510.481-18A318.84
liver, embryo E18.CNhs10579.499-43G418.12
liver, neonate N00.CNhs11117.641-24F424.97
liver, neonate N03.CNhs11123.1345-25G217.85
liver, neonate N06.CNhs11101.684-20A821.57
liver, neonate N07.CNhs11103.716-20H217.49
liver, neonate N10.CNhs11115.751-24B922.15
liver, neonate N20.CNhs11220.823-25A320.46
liver, neonate N25.CNhs11198.1368-26H123.14
liver, neonate N30.CNhs11106.1382-42D131.36
lung, adult.CNhs10474.28-22B117.00
lung, embryo E12.CNhs10522.354-16G212.70
lung, embryo E14.CNhs10604.404-26F89.45
lung, embryo E15.CNhs11020.432-17C516.30
lung, embryo E16.CNhs10998.458-17B612.67
lung, embryo E17.CNhs10605.480-44A611.06
lung, embryo E18.CNhs10583.1287-20I613.57
lung, neonate N00.CNhs11224.640-42C620.10
lung, neonate N06.CNhs11212.683-20E516.24
lung, neonate N07.CNhs11111.715-19A316.61
lung, neonate N10.CNhs11219.750-23E622.64
lung, neonate N20.CNhs11109.822-18A420.81
lung, neonate N25.CNhs11119.1359-25C718.82
lung, neonate N30.CNhs11133.1394-42H221.26
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A111.97
mammary gland, adult lactating day02.CNhs10480.595-22B620.16
mammary gland, adult pregnant day19.CNhs10476.588-5H224.56
medulla oblongata, adult.CNhs10477.17-12C212.36
medulla oblongata, neonate N30.CNhs11200.1396-42A313.95
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.23
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C233.33
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.83
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E29.76
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.25
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.84
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D813.37
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D912.46
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.50
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.94
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D612.25
olfactory brain, adult.CNhs10489.18-22I916.07
ovary, adult.CNhs10507.91-2I715.90
ovary, embryo E18.CNhs11040.505-44H76.41
ovary, neonate N00.CNhs11217.1299-22I414.01
oviduct, adult pregnant day01.CNhs10500.988-6G617.65
pancreas, adult.CNhs10486.34-16E419.91
pancreas, embryo E14.CNhs11012.405-44F49.95
pancreas, embryo E15.CNhs11042.1556-45F27.86
pancreas, embryo E16.CNhs11003.460-26E59.81
pancreas, embryo E17.CNhs10599.1558-45G39.15
pancreas, embryo E18.CNhs10580.1535-43I715.99
pancreas, neonate N00.CNhs11105.645-26G917.83
pancreas, neonate N01.CNhs11138.1531-43D714.18
pancreas, neonate N02.CNhs11139.1539-43D815.69
pancreas, neonate N16.CNhs11136.787-43B623.07
pancreas, neonate N25.CNhs11094.1555-45E231.63
pancreas, neonate N30.CNhs11182.1548-44H523.72
pituitary gland, adult.CNhs10493.21-1G811.23
pituitary gland, embryo E12.CNhs11018.346-16E69.00
pituitary gland, embryo E13.CNhs11009.370-44C74.14
pituitary gland, embryo E14.CNhs11037.398-44A513.93
pituitary gland, embryo E15.CNhs10592.427-16B910.11
pituitary gland, embryo E16.CNhs11036.449-43F613.02
pituitary gland, embryo E17.CNhs11039.1265-44F511.02
pituitary gland, neonate N00.CNhs11190.1308-22E96.39
placenta, adult pregnant day10.CNhs10472.539-13I720.65
placenta, adult pregnant day17.CNhs10464.577-18G314.83
prostate, adult.CNhs10470.859-1F815.66
skin, adult.CNhs10492.30-1C323.58
skin, neonate N00.CNhs11124.650-25G418.41
skin, neonate N03.CNhs11215.662-22H319.24
skin, neonate N06.CNhs11097.693-20I517.19
skin, neonate N10.CNhs11108.762-6C414.12
small intestine, neonate N16.CNhs11114.790-21I119.53
spinal cord, adult.CNhs10505.24-13C914.65
spleen, adult.CNhs10465.25-2G225.80
spleen, embryo E16.CNhs11035.461-43C19.49
spleen, embryo E18.CNhs11011.1271-21F218.89
spleen, neonate N10.CNhs11116.752-24D122.79
spleen, neonate N20.CNhs11112.824-19H127.48
spleen, neonate N25.CNhs11099.1354-25G324.71
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C621.59
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C919.59
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D321.56
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E39.65
stomach, embryo E15.CNhs10603.1252-16G813.01
stomach, embryo E16.CNhs11022.459-17D414.26
stomach, embryo E17.CNhs11006.1035-18D513.38
stomach, embryo E18.CNhs10999.1286-20C617.03
stomach, neonate N03.CNhs11193.1340-24B816.18
stomach, neonate N07.CNhs11210.718-18A918.76
stomach, neonate N25.CNhs11104.1355-25E418.58
stomach, neonate N30.CNhs11134.1386-42I121.52
submandibular gland, adult.CNhs10469.59-29C123.61
testis, adult.CNhs10504.57-7G510.15
testis, embryo E13.CNhs11031.389-23F511.96
testis, embryo E15.CNhs11034.443-27C58.11
testis, embryo E16.CNhs11033.470-26G512.64
testis, embryo E17.CNhs11029.486-18I512.40
testis, embryo E18.CNhs11027.503-18G511.32
testis, neonate N00.CNhs11189.1300-22B79.39
testis, neonate N07.CNhs11222.726-26I418.62
testis, neonate N10.CNhs11204.763-44D918.04
testis, neonate N20.CNhs11110.839-18H313.29
testis, neonate N30.CNhs11130.1391-42E215.55
thymus, adult.CNhs10471.38-12B517.38
thymus, embryo E14.CNhs11041.402-44I415.00
thymus, embryo E15.CNhs11005.430-45I214.58
thymus, embryo E16.CNhs11002.456-26C517.80
thymus, embryo E17.CNhs10581.478-18C118.62
thymus, embryo E18.CNhs10595.1273-19G419.27
thymus, neonate N02.CNhs11181.1541-43F826.32
thymus, neonate N03.CNhs11137.2104-43C722.15
thymus, neonate N06.CNhs11197.681-26C423.42
thymus, neonate N07.CNhs11211.713-19D328.12
thymus, neonate N10.CNhs11194.748-24E425.11
thymus, neonate N20.CNhs11186.820-7A225.44
thymus, neonate N25.CNhs11125.1362-25G729.63
thymus, neonate N30.CNhs11132.1393-42G232.49
tongue, adult.CNhs10499.32-1B429.25
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H321.53
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F731.67
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G521.49
urinary bladder, adult.CNhs10481.879-12E417.00
uterus, adult pregnant day19.CNhs10497.590-15F517.64
uterus, adult.CNhs10509.92-27E514.84
vagina, adult.CNhs10502.89-27D517.79
vesicular gland, adult.CNhs10491.51-27F813.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.81
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A320.05
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D718.22
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A514.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A817.67
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.87
whole body, embryo E11.CNhs11014.324-5I810.38
whole body, embryo E12.CNhs10587.857-27C915.16
whole body, embryo E13.CNhs10512.372-23H212.46
whole body, embryo E14.5.CNhs10578.420-27D214.59
whole body, embryo E14.CNhs10519.395-14B18.80
whole body, embryo E16.CNhs10514.453-14F210.48
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G515.08
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G512.13
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.33
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G514.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G517.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G518.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G518.66
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G518.71
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G520.19
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G515.75
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.29
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.78
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G516.93
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G513.08
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G517.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G515.32
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G513.54
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G516.84
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.66
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G514.35
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G518.52
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G520.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G513.48
whole body, embryo E17.5.CNhs10513.490-9F913.31
whole body, embryo E17.CNhs10517.475-3I514.24
whole body, embryo E18.CNhs10516.493-3B314.50
whole body, neonate N00.CNhs10525.657-19C214.40
whole body, neonate N01.CNhs10576.659-23C611.67
whole body, neonate N06.CNhs10515.692-21D114.56
whole body, neonate N10.CNhs10518.761-6B418.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gut epithelium1.53e-1355
endo-epithelium6.71e-1369
foregut2.42e-1080
subdivision of digestive tract4.31e-09114
endoderm-derived structure1.60e-08118
endoderm1.60e-08118
presumptive endoderm1.60e-08118
exocrine gland1.63e-0825
exocrine system1.63e-0825
digestive system2.68e-08116
digestive tract2.68e-08116
primitive gut2.68e-08116
unilaminar epithelium6.01e-0866
liver1.92e-0722
epithelial sac1.92e-0722
digestive gland1.92e-0722
epithelium of foregut-midgut junction1.92e-0722
anatomical boundary1.92e-0722
hepatobiliary system1.92e-0722
foregut-midgut junction1.92e-0722
hepatic diverticulum1.92e-0722
liver primordium1.92e-0722
septum transversum1.92e-0722
liver bud1.92e-0722
digestive tract diverticulum3.01e-0723
sac3.01e-0723
primordium3.54e-07134
mixed endoderm/mesoderm-derived structure5.29e-0735







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