FFCP PHASE1:Mm9::chr4:133229131..133229157,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=381|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:133229131..133229157,-|id=chr4:133229131..133229157,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!3.07e-17!193;UBERON:0004120!3.07e-17!193;UBERON:0006603!3.07e-17!193;UBERON:0000466!7.71e-15!79;UBERON:0003104!2.59e-12!131;UBERON:0009142!2.59e-12!131;UBERON:0005172!1.00e-11!49;UBERON:0005173!1.00e-11!49;UBERON:0002417!1.00e-11!49;UBERON:0000916!1.00e-11!49;UBERON:0002100!1.57e-11!98;UBERON:0002553!2.14e-11!39;UBERON:0003886!4.58e-11!38;UBERON:0005177!7.31e-11!85;UBERON:0002323!1.72e-10!37;UBERON:0004458!1.72e-10!37;UBERON:0009569!3.89e-10!66;UBERON:0005256!7.40e-09!47;UBERON:0000464!9.17e-09!57;UBERON:0002405!3.89e-08!70;UBERON:0002365!4.16e-08!25;UBERON:0002330!4.16e-08!25;UBERON:0001048!1.00e-07!147;UBERON:0001041!2.16e-07!92;UBERON:0000077!6.06e-07!97;UBERON:0002107!9.35e-07!22;UBERON:0007499!9.35e-07!22;UBERON:0006925!9.35e-07!22;UBERON:0009497!9.35e-07!22;UBERON:0000015!9.35e-07!22;UBERON:0002423!9.35e-07!22;UBERON:0006235!9.35e-07!22;UBERON:0008835!9.35e-07!22;UBERON:0003894!9.35e-07!22;UBERON:0004161!9.35e-07!22;UBERON:0008836!9.35e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0002553,1.14e-12,39;UBERON:0003886,3.64e-12,38;UBERON:0002323,2.50e-11,37;UBERON:0004458,2.50e-11,37;UBERON:0005177,4.94e-11,79;UBERON:0002100,8.32e-11,90;UBERON:0005172,8.93e-08,49;UBERON:0005173,8.93e-08,49;UBERON:0002417,8.93e-08,49;UBERON:0000916,8.93e-08,49;UBERON:0002075,1.88e-07,19;UBERON:0009569,3.25e-07,66;UBERON:0002365,3.60e-07,25;UBERON:0002330,3.60e-07,25;UBERON:0002371,5.08e-07,16;UBERON:0003887,9.29e-07,10|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0.16787927191189,0,0.387369970324729,0.140788722151667,0.234064526321993,0,0.159544317990673,1.71200729931206,0.34968160967599,1.33243904726265,1.41732687172878,0.699561878128147,3.15462165358238,2.33094537129756,2.54633791078818,1.7008658030214,2.18440092641948,0.783599367416806,0,0,0,0,0.215471232685889,0.380046838912748,0,0,8.25539875497521,0.61506478758457,31.6963362030877,0.288851619751275,0.166234645358492,0.204169356262369,1.25559489221072,0.7813353445238,1.57057123192139,0.588231488031014,0,0.971020706062307,0.629484089877886,0.405507724878058,1.10128051297009,3.12956537739216,0.872100625521786,0.219686182734472,0.388859798148567,0.279972843250725,1.43752564364972,1.67782606057736,0.725362142011344,0.672187598284928,0.771778308107841,0.85960031981627,0.515672092277442,0.202316460859598,0,0.633831403506179,1.69422266034566,0,3.1496490104849,1.97773272513395,2.8419204597844,1.19840044207362,1.15265491596466,0.103689612308478,0,0,0.571301968807607,0.220868540951614,0.244981598429908,0.0958454710182364,0,0,0,0.153606533256243,0.131886287730194,0.274462930807229,0,0,0.56276261003168,0.30559649555362,0,0.427115042397309,0,0.075726193333184,0.151143120213571,1.15945795480671,0.860423876981386,1.3599426674155,1.07940638327563,0.649776417447669,3.13618820968135,0.421333260395256,0.340860645156116,0.259786004602869,0.70667914902068,0.281686839553361,0,0,0,0,0,1.01104889002957,1.37020655662872,2.58937883647172,0.445326417194474,1.21439728736295,0.913396434936424,1.38369298353635,1.20578112442098,0.705532242814229,0.502666365318702,1.23597483867187,0.289198713839823,0.884610551949874,0.323533699894818,1.10420759230197,0.969750506270444,0,0,0.41889341362691,0.255457055208591,0.599075622529601,0.599902730993408,0.381210681219194,0,0,0.376963056338593,0.695297280769106,0,0,0.486723789203273,1.52759045775474,1.7416975885413,3.53811861807145,0.210441855886474,0.390361328888111,0.689706313300419,0.360124259610698,1.05493372485001,0.476255494059295,0.512454881139399,0.187403449119458,1.03481348295606,0.215567992932842,0.189106080167819,0,0,0.278047249225598,0.348252166522167,0.823128545631774,0.796137067273973,1.40442637462647,0.257347907114715,0.568326998791185,0.207125772535502,0.469052119962192,0.180062061461015,0.23674473558521,0.393528463494808,0.308534225774757,0.465067889500816,0.536546802799238,0.350296027101508,0,0.656669856316381,0.0810688095458557,0.292399974850665,0.878200461164203,0,0.210289948564127,0.617427674275707,0.991256348951394,0,1.06644125267617,0,0.902072229254653,1.00841762311671,1.11189021922435,0.380451252225118,0.949058123089023,0.658795818896044,0.502670417600539,0.198956472041151,0.19496408711912,0.898819408654221,0.648414149624083,0.398282546508734,0.948339504765408,0.456994050438915,3.38123207019241,0.814605311381257,0.775809948670503,0.49095073923223,0.632365371242573,0.885660887877613,0.941992367048249,1.1105744752962,2.66807364378434,0.667380422864376,0.982794975566015,1.79889689907883,1.01430060694251,0.72353147925725,1.01850340712568,0.863088412352432,1.94562272130042,0.823684239564244,5.75072826109418,2.23284568601102,1.5601883655728,1.01031551178845,0.717589654087649,6.75420929908714,0.923765950833023,0.189491411770485,0.325929952884052,0.339490171550376,0,1.67506257441816,0.952174563544055,1.56106918286239,0.157635144106191,0.664394068946325,1.11618338060241,1.3109065177259,1.55416483679306,0.723245292907558,4.52373851817817,0.54390568381871,4.91764273019036,1.93155722413313,0,0.117211686592203,0.163934945376675,0.504941854408746,0.631016438832513,0,0,0.477937595905104,0,0.283076530788832,0.809621403349789,0.292255857911312,0,0,0.425820255624806,1.42452482933804,1.46598263418218,1.81467135269789,3.98235415019888,0.485561272309963,0,1.32023555829129,2.95301892880773,3.3817866273832,2.32585463851399,1.45413491791002,0.712994756769443,1.26414703174326,2.10837217149998,4.12542172992747,0.680879211507576,0.18006109403131,0.388076051348264,0.857348140126369,0.709360934569094,0.891844088010353,0.658196082408484,0,0,0.21183207086382,0.661585194164886,0.32977250588296,0.645857706783622,0.482503399425247,0.596861720015682,0.164140899745061,0.291480836629851,0.18542530201051,1.53783792718067,1.03193433981611,1.29636169158798,1.31857919903284,1.77702496037333,0.915112692826091,0.169978429993855,0.419854356970974,0.276399947608848,2.86401185404534,0.632671987162271,0.813277868507395,0.432021363287205,0.836353184057875,0,0.269728692769641,1.1571483801547,1.04702376793612,0.518459893167171,1.24267862617385,17.4744810992099,0.747582730219894,0.66183396182839,1.16670713006429,2.19571699912143,0.844780627453891,0.821500670520278,1.43224823328345,0.629156066554265,9.90494895386625,10.3690802252832,0.316011120628178,0.608175645870493,0.718976700153791,1.16928740680016,1.61124026100733,0.79472541912506,0.721172697119813,0.886137163047463,0.908698049533329,0.457240839929999,0.705783295957884,0.779663045918019,1.15454209968395,0.350630706544707,0.453460767230423,0,0.179427713218951,0,0.579568782096571,1.12609485270709,0.915758121336325,1.2862102744744,8.52672576860118,0,0,0.572895513439397,0.343706364687375,0,0.755393897389701,0,0,0,0,0,1.19707462020309,0.682934423016537,0.486213434136588,0.628839487883947,0.551530525350042,0.666740183404846,1.03017528619447,0.962757628775446,1.01078884705519,0.25347929989024,0.943131706930381,0.37456602987953,0.640251524048693,0.574354689556133,0,0.463537303779422,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.872078499793971,0.564656282491984,0.423073039458382,0.548783918618318,0.526139422875686,0.271608227691724,0,0.355905054372522,0.689531376628944,0.409231043169689,0.309873682371932,1.15743966588685,0,0.233931608445408,1.28922632428979,0.57386499620653,0.882365676478062,0.463735671240843|short_description=p@chr4:133229131..133229157,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=381 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:133229131..133229157,- | |||
|id=chr4:133229131..133229157,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!3.07e-17!193;UBERON:0004120!3.07e-17!193;UBERON:0006603!3.07e-17!193;UBERON:0000466!7.71e-15!79;UBERON:0003104!2.59e-12!131;UBERON:0009142!2.59e-12!131;UBERON:0005172!1.00e-11!49;UBERON:0005173!1.00e-11!49;UBERON:0002417!1.00e-11!49;UBERON:0000916!1.00e-11!49;UBERON:0002100!1.57e-11!98;UBERON:0002553!2.14e-11!39;UBERON:0003886!4.58e-11!38;UBERON:0005177!7.31e-11!85;UBERON:0002323!1.72e-10!37;UBERON:0004458!1.72e-10!37;UBERON:0009569!3.89e-10!66;UBERON:0005256!7.40e-09!47;UBERON:0000464!9.17e-09!57;UBERON:0002405!3.89e-08!70;UBERON:0002365!4.16e-08!25;UBERON:0002330!4.16e-08!25;UBERON:0001048!1.00e-07!147;UBERON:0001041!2.16e-07!92;UBERON:0000077!6.06e-07!97;UBERON:0002107!9.35e-07!22;UBERON:0007499!9.35e-07!22;UBERON:0006925!9.35e-07!22;UBERON:0009497!9.35e-07!22;UBERON:0000015!9.35e-07!22;UBERON:0002423!9.35e-07!22;UBERON:0006235!9.35e-07!22;UBERON:0008835!9.35e-07!22;UBERON:0003894!9.35e-07!22;UBERON:0004161!9.35e-07!22;UBERON:0008836!9.35e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002553,1.14e-12,39;UBERON:0003886,3.64e-12,38;UBERON:0002323,2.50e-11,37;UBERON:0004458,2.50e-11,37;UBERON:0005177,4.94e-11,79;UBERON:0002100,8.32e-11,90;UBERON:0005172,8.93e-08,49;UBERON:0005173,8.93e-08,49;UBERON:0002417,8.93e-08,49;UBERON:0000916,8.93e-08,49;UBERON:0002075,1.88e-07,19;UBERON:0009569,3.25e-07,66;UBERON:0002365,3.60e-07,25;UBERON:0002330,3.60e-07,25;UBERON:0002371,5.08e-07,16;UBERON:0003887,9.29e-07,10 | |||
|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0.16787927191189,0,0.387369970324729,0.140788722151667,0.234064526321993,0,0.159544317990673,1.71200729931206,0.34968160967599,1.33243904726265,1.41732687172878,0.699561878128147,3.15462165358238,2.33094537129756,2.54633791078818,1.7008658030214,2.18440092641948,0.783599367416806,0,0,0,0,0.215471232685889,0.380046838912748,0,0,8.25539875497521,0.61506478758457,31.6963362030877,0.288851619751275,0.166234645358492,0.204169356262369,1.25559489221072,0.7813353445238,1.57057123192139,0.588231488031014,0,0.971020706062307,0.629484089877886,0.405507724878058,1.10128051297009,3.12956537739216,0.872100625521786,0.219686182734472,0.388859798148567,0.279972843250725,1.43752564364972,1.67782606057736,0.725362142011344,0.672187598284928,0.771778308107841,0.85960031981627,0.515672092277442,0.202316460859598,0,0.633831403506179,1.69422266034566,0,3.1496490104849,1.97773272513395,2.8419204597844,1.19840044207362,1.15265491596466,0.103689612308478,0,0,0.571301968807607,0.220868540951614,0.244981598429908,0.0958454710182364,0,0,0,0.153606533256243,0.131886287730194,0.274462930807229,0,0,0.56276261003168,0.30559649555362,0,0.427115042397309,0,0.075726193333184,0.151143120213571,1.15945795480671,0.860423876981386,1.3599426674155,1.07940638327563,0.649776417447669,3.13618820968135,0.421333260395256,0.340860645156116,0.259786004602869,0.70667914902068,0.281686839553361,0,0,0,0,0,1.01104889002957,1.37020655662872,2.58937883647172,0.445326417194474,1.21439728736295,0.913396434936424,1.38369298353635,1.20578112442098,0.705532242814229,0.502666365318702,1.23597483867187,0.289198713839823,0.884610551949874,0.323533699894818,1.10420759230197,0.969750506270444,0,0,0.41889341362691,0.255457055208591,0.599075622529601,0.599902730993408,0.381210681219194,0,0,0.376963056338593,0.695297280769106,0,0,0.486723789203273,1.52759045775474,1.7416975885413,3.53811861807145,0.210441855886474,0.390361328888111,0.689706313300419,0.360124259610698,1.05493372485001,0.476255494059295,0.512454881139399,0.187403449119458,1.03481348295606,0.215567992932842,0.189106080167819,0,0,0.278047249225598,0.348252166522167,0.823128545631774,0.796137067273973,1.40442637462647,0.257347907114715,0.568326998791185,0.207125772535502,0.469052119962192,0.180062061461015,0.23674473558521,0.393528463494808,0.308534225774757,0.465067889500816,0.536546802799238,0.350296027101508,0,0.656669856316381,0.0810688095458557,0.292399974850665,0.878200461164203,0,0.210289948564127,0.617427674275707,0.991256348951394,0,1.06644125267617,0,0.902072229254653,1.00841762311671,1.11189021922435,0.380451252225118,0.949058123089023,0.658795818896044,0.502670417600539,0.198956472041151,0.19496408711912,0.898819408654221,0.648414149624083,0.398282546508734,0.948339504765408,0.456994050438915,3.38123207019241,0.814605311381257,0.775809948670503,0.49095073923223,0.632365371242573,0.885660887877613,0.941992367048249,1.1105744752962,2.66807364378434,0.667380422864376,0.982794975566015,1.79889689907883,1.01430060694251,0.72353147925725,1.01850340712568,0.863088412352432,1.94562272130042,0.823684239564244,5.75072826109418,2.23284568601102,1.5601883655728,1.01031551178845,0.717589654087649,6.75420929908714,0.923765950833023,0.189491411770485,0.325929952884052,0.339490171550376,0,1.67506257441816,0.952174563544055,1.56106918286239,0.157635144106191,0.664394068946325,1.11618338060241,1.3109065177259,1.55416483679306,0.723245292907558,4.52373851817817,0.54390568381871,4.91764273019036,1.93155722413313,0,0.117211686592203,0.163934945376675,0.504941854408746,0.631016438832513,0,0,0.477937595905104,0,0.283076530788832,0.809621403349789,0.292255857911312,0,0,0.425820255624806,1.42452482933804,1.46598263418218,1.81467135269789,3.98235415019888,0.485561272309963,0,1.32023555829129,2.95301892880773,3.3817866273832,2.32585463851399,1.45413491791002,0.712994756769443,1.26414703174326,2.10837217149998,4.12542172992747,0.680879211507576,0.18006109403131,0.388076051348264,0.857348140126369,0.709360934569094,0.891844088010353,0.658196082408484,0,0,0.21183207086382,0.661585194164886,0.32977250588296,0.645857706783622,0.482503399425247,0.596861720015682,0.164140899745061,0.291480836629851,0.18542530201051,1.53783792718067,1.03193433981611,1.29636169158798,1.31857919903284,1.77702496037333,0.915112692826091,0.169978429993855,0.419854356970974,0.276399947608848,2.86401185404534,0.632671987162271,0.813277868507395,0.432021363287205,0.836353184057875,0,0.269728692769641,1.1571483801547,1.04702376793612,0.518459893167171,1.24267862617385,17.4744810992099,0.747582730219894,0.66183396182839,1.16670713006429,2.19571699912143,0.844780627453891,0.821500670520278,1.43224823328345,0.629156066554265,9.90494895386625,10.3690802252832,0.316011120628178,0.608175645870493,0.718976700153791,1.16928740680016,1.61124026100733,0.79472541912506,0.721172697119813,0.886137163047463,0.908698049533329,0.457240839929999,0.705783295957884,0.779663045918019,1.15454209968395,0.350630706544707,0.453460767230423,0,0.179427713218951,0,0.579568782096571,1.12609485270709,0.915758121336325,1.2862102744744,8.52672576860118,0,0,0.572895513439397,0.343706364687375,0,0.755393897389701,0,0,0,0,0,1.19707462020309,0.682934423016537,0.486213434136588,0.628839487883947,0.551530525350042,0.666740183404846,1.03017528619447,0.962757628775446,1.01078884705519,0.25347929989024,0.943131706930381,0.37456602987953,0.640251524048693,0.574354689556133,0,0.463537303779422,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.872078499793971,0.564656282491984,0.423073039458382,0.548783918618318,0.526139422875686,0.271608227691724,0,0.355905054372522,0.689531376628944,0.409231043169689,0.309873682371932,1.15743966588685,0,0.233931608445408,1.28922632428979,0.57386499620653,0.882365676478062,0.463735671240843 | |||
|short_description=p@chr4:133229131..133229157,- | |||
}} |
Revision as of 04:02, 14 September 2013
Short description: | p@chr4:133229131..133229157, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:133229131..133229157, - |
Coexpression cluster: | MCL_coexpression_mm9:381 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anatomical cavity | 1.14e-12 | 39 |
body cavity precursor | 3.64e-12 | 38 |
body cavity | 2.50e-11 | 37 |
body cavity or lining | 2.50e-11 | 37 |
trunk region element | 4.94e-11 | 79 |
trunk | 8.32e-11 | 90 |
abdomen element | 8.93e-08 | 49 |
abdominal segment element | 8.93e-08 | 49 |
abdominal segment of trunk | 8.93e-08 | 49 |
abdomen | 8.93e-08 | 49 |
viscus | 1.88e-07 | 19 |
subdivision of trunk | 3.25e-07 | 66 |
exocrine gland | 3.60e-07 | 25 |
exocrine system | 3.60e-07 | 25 |
bone marrow | 5.08e-07 | 16 |
intraembryonic coelom | 9.29e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.