FFCP PHASE1:Mm9::chr4:98697506..98697517,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=196|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:98697506..98697517,-|id=chr4:98697506..98697517,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,7.25e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.22e-30!22;UBERON:0007499!1.22e-30!22;UBERON:0006925!1.22e-30!22;UBERON:0009497!1.22e-30!22;UBERON:0000015!1.22e-30!22;UBERON:0002423!1.22e-30!22;UBERON:0006235!1.22e-30!22;UBERON:0008835!1.22e-30!22;UBERON:0003894!1.22e-30!22;UBERON:0004161!1.22e-30!22;UBERON:0008836!1.22e-30!22;UBERON:0009854!4.28e-29!23;UBERON:0009856!4.28e-29!23;UBERON:0002365!2.25e-26!25;UBERON:0002330!2.25e-26!25;UBERON:0005172!1.40e-20!49;UBERON:0005173!1.40e-20!49;UBERON:0002417!1.40e-20!49;UBERON:0000916!1.40e-20!49;UBERON:0009569!1.07e-13!66;UBERON:0005057!8.01e-12!51;UBERON:0003914!8.54e-12!47;UBERON:0005256!8.54e-12!47;UBERON:0003929!2.05e-09!55;UBERON:0005177!2.66e-09!85;UBERON:0002368!2.93e-08!60;UBERON:0002405!2.48e-07!70;UBERON:0002100!2.64e-07!98;UBERON:0002530!2.75e-07!65;UBERON:0000490!4.12e-07!66;UBERON:0000466!9.27e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.34e-33,22;UBERON:0007499,8.34e-33,22;UBERON:0006925,8.34e-33,22;UBERON:0009497,8.34e-33,22;UBERON:0000015,8.34e-33,22;UBERON:0002423,8.34e-33,22;UBERON:0006235,8.34e-33,22;UBERON:0008835,8.34e-33,22;UBERON:0003894,8.34e-33,22;UBERON:0004161,8.34e-33,22;UBERON:0008836,8.34e-33,22;UBERON:0009854,2.37e-31,23;UBERON:0009856,2.37e-31,23;UBERON:0002365,8.62e-29,25;UBERON:0002330,8.62e-29,25;UBERON:0005256,1.15e-15,45;UBERON:0003914,5.78e-15,47;UBERON:0005172,2.55e-14,49;UBERON:0005173,2.55e-14,49;UBERON:0002417,2.55e-14,49;UBERON:0000916,2.55e-14,49;UBERON:0003929,1.15e-12,55;UBERON:0002368,1.55e-11,60;UBERON:0003104,2.48e-11,61;UBERON:0009142,2.48e-11,61;UBERON:0002530,1.40e-10,65;UBERON:0000490,2.09e-10,66;UBERON:0009569,2.09e-10,66;UBERON:0005911,6.50e-10,69;UBERON:0000949,1.84e-09,72;UBERON:0005177,1.54e-08,79;UBERON:0001041,2.03e-08,80;UBERON:0002100,2.25e-07,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0.539703191637817,3.24888208723835,3.13618820968135,1.82577746171277,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0.0632365371242573,0.147610147979602,0.31399745568275,0.123397163921801,9.48648406678877,0.667380422864376,0.393117990226406,0.674586337154561,0.811440485554012,0.964708639009667,0,2.01387296215567,0,1.09824565275233,2.87536413054709,0.372140947668503,2.18426371180192,4.79899868099512,7.53469136792031,6.27176577772377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0.476293691283074,0.115884325944855,0,0,0,0,0.532427418478012,0,0,0,0.0846146078916765,0,0,0,0.561142271657738,0,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0,0,0,0|short_description=p@chr4:98697506..98697517,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=196 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:98697506..98697517,- | |||
|id=chr4:98697506..98697517,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.25e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.22e-30!22;UBERON:0007499!1.22e-30!22;UBERON:0006925!1.22e-30!22;UBERON:0009497!1.22e-30!22;UBERON:0000015!1.22e-30!22;UBERON:0002423!1.22e-30!22;UBERON:0006235!1.22e-30!22;UBERON:0008835!1.22e-30!22;UBERON:0003894!1.22e-30!22;UBERON:0004161!1.22e-30!22;UBERON:0008836!1.22e-30!22;UBERON:0009854!4.28e-29!23;UBERON:0009856!4.28e-29!23;UBERON:0002365!2.25e-26!25;UBERON:0002330!2.25e-26!25;UBERON:0005172!1.40e-20!49;UBERON:0005173!1.40e-20!49;UBERON:0002417!1.40e-20!49;UBERON:0000916!1.40e-20!49;UBERON:0009569!1.07e-13!66;UBERON:0005057!8.01e-12!51;UBERON:0003914!8.54e-12!47;UBERON:0005256!8.54e-12!47;UBERON:0003929!2.05e-09!55;UBERON:0005177!2.66e-09!85;UBERON:0002368!2.93e-08!60;UBERON:0002405!2.48e-07!70;UBERON:0002100!2.64e-07!98;UBERON:0002530!2.75e-07!65;UBERON:0000490!4.12e-07!66;UBERON:0000466!9.27e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.34e-33,22;UBERON:0007499,8.34e-33,22;UBERON:0006925,8.34e-33,22;UBERON:0009497,8.34e-33,22;UBERON:0000015,8.34e-33,22;UBERON:0002423,8.34e-33,22;UBERON:0006235,8.34e-33,22;UBERON:0008835,8.34e-33,22;UBERON:0003894,8.34e-33,22;UBERON:0004161,8.34e-33,22;UBERON:0008836,8.34e-33,22;UBERON:0009854,2.37e-31,23;UBERON:0009856,2.37e-31,23;UBERON:0002365,8.62e-29,25;UBERON:0002330,8.62e-29,25;UBERON:0005256,1.15e-15,45;UBERON:0003914,5.78e-15,47;UBERON:0005172,2.55e-14,49;UBERON:0005173,2.55e-14,49;UBERON:0002417,2.55e-14,49;UBERON:0000916,2.55e-14,49;UBERON:0003929,1.15e-12,55;UBERON:0002368,1.55e-11,60;UBERON:0003104,2.48e-11,61;UBERON:0009142,2.48e-11,61;UBERON:0002530,1.40e-10,65;UBERON:0000490,2.09e-10,66;UBERON:0009569,2.09e-10,66;UBERON:0005911,6.50e-10,69;UBERON:0000949,1.84e-09,72;UBERON:0005177,1.54e-08,79;UBERON:0001041,2.03e-08,80;UBERON:0002100,2.25e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0.539703191637817,3.24888208723835,3.13618820968135,1.82577746171277,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0.0632365371242573,0.147610147979602,0.31399745568275,0.123397163921801,9.48648406678877,0.667380422864376,0.393117990226406,0.674586337154561,0.811440485554012,0.964708639009667,0,2.01387296215567,0,1.09824565275233,2.87536413054709,0.372140947668503,2.18426371180192,4.79899868099512,7.53469136792031,6.27176577772377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0.476293691283074,0.115884325944855,0,0,0,0,0.532427418478012,0,0,0,0.0846146078916765,0,0,0,0.561142271657738,0,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr4:98697506..98697517,- | |||
}} |
Revision as of 05:40, 14 September 2013
Short description: | p@chr4:98697506..98697517, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:98697506..98697517, - |
Coexpression cluster: | MCL_coexpression_mm9:196 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.25e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 8.34e-33 | 22 |
epithelial sac | 8.34e-33 | 22 |
digestive gland | 8.34e-33 | 22 |
epithelium of foregut-midgut junction | 8.34e-33 | 22 |
anatomical boundary | 8.34e-33 | 22 |
hepatobiliary system | 8.34e-33 | 22 |
foregut-midgut junction | 8.34e-33 | 22 |
hepatic diverticulum | 8.34e-33 | 22 |
liver primordium | 8.34e-33 | 22 |
septum transversum | 8.34e-33 | 22 |
liver bud | 8.34e-33 | 22 |
digestive tract diverticulum | 2.37e-31 | 23 |
sac | 2.37e-31 | 23 |
exocrine gland | 8.62e-29 | 25 |
exocrine system | 8.62e-29 | 25 |
trunk mesenchyme | 1.15e-15 | 45 |
epithelial tube | 5.78e-15 | 47 |
abdomen element | 2.55e-14 | 49 |
abdominal segment element | 2.55e-14 | 49 |
abdominal segment of trunk | 2.55e-14 | 49 |
abdomen | 2.55e-14 | 49 |
gut epithelium | 1.15e-12 | 55 |
endocrine gland | 1.55e-11 | 60 |
mesenchyme | 2.48e-11 | 61 |
entire embryonic mesenchyme | 2.48e-11 | 61 |
gland | 1.40e-10 | 65 |
unilaminar epithelium | 2.09e-10 | 66 |
subdivision of trunk | 2.09e-10 | 66 |
endo-epithelium | 6.50e-10 | 69 |
endocrine system | 1.84e-09 | 72 |
trunk region element | 1.54e-08 | 79 |
foregut | 2.03e-08 | 80 |
trunk | 2.25e-07 | 90 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.