FFCP PHASE1:Hg19::chr8:74209501..74209514,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=157506|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19975|TSSclassifier=N|UniProt=|association_with_transcript=162bp_to_uc003xzj.2_5end|description=CAGE_peak_11_at_RDH10_5end|id=chr8:74209501..74209514,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000197;1.14e-17;6!CL:0000098;1.14e-17;6!CL:0002167;1.14e-17;6!CL:0000077;4.88e-16;19!CL:0000159;3.66e-14;2!CL:0002541;2.02e-09;3!CL:0002579;2.02e-09;3!CL:0002616;2.70e-08;1!CL:0000511;3.55e-08;1!CL:0002625;3.55e-08;1!CL:0000216;3.55e-08;1!CL:0002591;3.55e-08;1!CL:0000313;3.55e-08;1!CL:0000319;1.11e-07;1|ontology_enrichment_celltype_v019_2=CL:0000197,7.27e-18,6;CL:0000098,7.27e-18,6;CL:0002167,7.27e-18,6;CL:0000077,4.26e-16,19;CL:0000159,2.46e-14,2;CL:0002541,2.41e-09,3;CL:0002579,2.62e-09,3;CL:0002616,2.70e-08,1;CL:0002591,3.55e-08,1;CL:0000511,3.80e-08,1;CL:0002625,3.80e-08,1;CL:0000216,3.80e-08,1;CL:0000313,4.35e-08,1;CL:0000319,6.10e-08,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3371;3.55e-08;1!DOID:4549;3.55e-08;1!DOID:5861;3.55e-08;1!DOID:2152;3.55e-08;1!DOID:6496;3.55e-08;1!DOID:3030;1.11e-07;1|ontology_enrichment_disease_v019_2=DOID:3371,4.07e-08,1;DOID:4549,4.07e-08,1;DOID:5861,4.07e-08,1;DOID:6496,4.07e-08,1;DOID:2152,4.35e-08,1;DOID:3030,6.10e-08,1|ontology_enrichment_uberon=UBERON:0004457!1.35e-07!12;UBERON:0000042!1.35e-07!12|ontology_enrichment_uberon_v019=UBERON:0004909;1.18e-14;2!UBERON:0003688;2.97e-10;6!UBERON:0002358;2.97e-10;6!UBERON:0003684;2.97e-10;6!UBERON:0001178;2.97e-10;6!UBERON:0003124;2.02e-09;3!UBERON:0000920;2.02e-09;3!UBERON:0001136;3.55e-08;1!UBERON:0001343;3.55e-08;1!UBERON:0004911;3.55e-08;1!UBERON:0004910;3.55e-08;1!UBERON:0004813;3.55e-08;1!UBERON:0004457;5.48e-07;9!UBERON:0000042;5.48e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0004909,1.54e-14,2;UBERON:0003688,3.78e-10,6;UBERON:0002358,3.78e-10,6;UBERON:0003684,3.78e-10,6;UBERON:0001178,3.78e-10,6;UBERON:0000920,2.41e-09,3;UBERON:0001136,3.80e-08,1;UBERON:0001343,3.80e-08,1;UBERON:0004910,3.80e-08,1;UBERON:0005154,3.80e-08,1;UBERON:0005295,3.80e-08,1;UBERON:0004813,3.80e-08,1;UBERON:0005297,3.80e-08,1;UBERON:0005294,3.80e-08,1;UBERON:0010141,3.80e-08,1;UBERON:0005891,3.80e-08,1;UBERON:0004911,4.35e-08,1|phase1_expression=0,0.642301571672949,0.563817616383885,2.00146596706261,0.893922188854576,6.10636966870258,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0.246242116153576,0.204000691244253,0.313454721478088,0,0,0,0,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0.553995408531877,0,0,0,0,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.768547918354051,0.650296737799391,0.164437904603676,0,0.289803085735052,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0.670700859703636,0.12786256184353,0.361439152384566,0,0.724232594804119,0,0,0.189069634328136,0,0.087834785693126,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0.860509862246441,0,0,0,0,0,0.134710672069688,0,0,0.576175924479999,0,0,0,0,0,0,0.140450806702248,0.204154171254893,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0.226864366320042,0,0,0.847727604638247,0,0.515262646192195,0.257640540045629,0.37223371266318,0,0.194874010322397,0.504867548488229,0.184099797284599,0.646584227275248,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337169380156203,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0.4115740113314,0,1.26755034821831,0.982827216677626,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0.383382679165211,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50719688529793,1.74306691720059,1.3996218765488,0,0,0,0,0,0,0,0.205476322550383,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87173775377726,2.67643483195743,3.6271555457805,1.40569697991256,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0.460385919864187,1.40330047216537,1.53766979106841,1.02341449813341,0.321707842287215,0,0.308419387605311,0.177561725313127,0.164254312027618,0,0.116210378459959,0.362578348774867,0,0.184161977871793,0.918515585316854,0.364182336013434,1.18011973463482,0,0.0770153371044148,0,0,0.211103257785751,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0.769350375349168,0.328014645699706,0,0.103041011647722,0,0.577566499444116,0,0,3.21367859688319,0,0.154048617114644,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0.929691098594572,0.62962469366128,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0.421258456238981,0,0.487426979262569,0,0.136499911407986,1.41405431953713,3.39024349860728,0.551365343546124,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=157506 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19975 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=162bp_to_uc003xzj.2_5end | |||
|description=CAGE_peak_11_at_RDH10_5end | |||
|id=chr8:74209501..74209514,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000197;1.14e-17;6!CL:0000098;1.14e-17;6!CL:0002167;1.14e-17;6!CL:0000077;4.88e-16;19!CL:0000159;3.66e-14;2!CL:0002541;2.02e-09;3!CL:0002579;2.02e-09;3!CL:0002616;2.70e-08;1!CL:0000511;3.55e-08;1!CL:0002625;3.55e-08;1!CL:0000216;3.55e-08;1!CL:0002591;3.55e-08;1!CL:0000313;3.55e-08;1!CL:0000319;1.11e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,7.27e-18,6;CL:0000098,7.27e-18,6;CL:0002167,7.27e-18,6;CL:0000077,4.26e-16,19;CL:0000159,2.46e-14,2;CL:0002541,2.41e-09,3;CL:0002579,2.62e-09,3;CL:0002616,2.70e-08,1;CL:0002591,3.55e-08,1;CL:0000511,3.80e-08,1;CL:0002625,3.80e-08,1;CL:0000216,3.80e-08,1;CL:0000313,4.35e-08,1;CL:0000319,6.10e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;3.55e-08;1!DOID:4549;3.55e-08;1!DOID:5861;3.55e-08;1!DOID:2152;3.55e-08;1!DOID:6496;3.55e-08;1!DOID:3030;1.11e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,4.07e-08,1;DOID:4549,4.07e-08,1;DOID:5861,4.07e-08,1;DOID:6496,4.07e-08,1;DOID:2152,4.35e-08,1;DOID:3030,6.10e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0004457!1.35e-07!12;UBERON:0000042!1.35e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004909;1.18e-14;2!UBERON:0003688;2.97e-10;6!UBERON:0002358;2.97e-10;6!UBERON:0003684;2.97e-10;6!UBERON:0001178;2.97e-10;6!UBERON:0003124;2.02e-09;3!UBERON:0000920;2.02e-09;3!UBERON:0001136;3.55e-08;1!UBERON:0001343;3.55e-08;1!UBERON:0004911;3.55e-08;1!UBERON:0004910;3.55e-08;1!UBERON:0004813;3.55e-08;1!UBERON:0004457;5.48e-07;9!UBERON:0000042;5.48e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004909,1.54e-14,2;UBERON:0003688,3.78e-10,6;UBERON:0002358,3.78e-10,6;UBERON:0003684,3.78e-10,6;UBERON:0001178,3.78e-10,6;UBERON:0000920,2.41e-09,3;UBERON:0001136,3.80e-08,1;UBERON:0001343,3.80e-08,1;UBERON:0004910,3.80e-08,1;UBERON:0005154,3.80e-08,1;UBERON:0005295,3.80e-08,1;UBERON:0004813,3.80e-08,1;UBERON:0005297,3.80e-08,1;UBERON:0005294,3.80e-08,1;UBERON:0010141,3.80e-08,1;UBERON:0005891,3.80e-08,1;UBERON:0004911,4.35e-08,1 | |||
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| |||
|short_description=p11@RDH10 | |||
}} |
Revision as of 06:01, 14 September 2013
Short description: | p11@RDH10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_RDH10_5end |
Coexpression cluster: | NA |
Association with transcript: | 162bp_to_uc003xzj.2_5end |
EntrezGene: | RDH10 |
HGNC: | 19975 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 7.27e-18 | 6 |
sensory epithelial cell | 7.27e-18 | 6 |
olfactory epithelial cell | 7.27e-18 | 6 |
mesothelial cell | 4.26e-16 | 19 |
seromucus secreting cell | 2.46e-14 | 2 |
chorionic membrane mesenchymal stem cell | 2.41e-09 | 3 |
omentum preadipocyte | 2.62e-09 | 3 |
perirenal adipocyte cell | 2.70e-08 | 1 |
smooth muscle cell of the pulmonary artery | 3.55e-08 | 1 |
androgen binding protein secreting cell | 3.80e-08 | 1 |
seminiferous tubule epithelial cell | 3.80e-08 | 1 |
Sertoli cell | 3.80e-08 | 1 |
serous secreting cell | 4.35e-08 | 1 |
mucus secreting cell | 6.10e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of gonad | 1.54e-14 | 2 |
omentum | 3.78e-10 | 6 |
peritoneum | 3.78e-10 | 6 |
abdominal cavity | 3.78e-10 | 6 |
visceral peritoneum | 3.78e-10 | 6 |
egg chorion | 2.41e-09 | 3 |
mesothelium | 3.80e-08 | 1 |
seminiferous tubule of testis | 3.80e-08 | 1 |
epithelium of male gonad | 3.80e-08 | 1 |
epithelial cord | 3.80e-08 | 1 |
sex cord | 3.80e-08 | 1 |
seminiferous tubule epithelium | 3.80e-08 | 1 |
testis sex cord | 3.80e-08 | 1 |
genital ridge | 3.80e-08 | 1 |
primitive sex cord of indifferent gonad | 3.80e-08 | 1 |
coelomic epithelium | 3.80e-08 | 1 |
epithelium of female gonad | 4.35e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 4.07e-08 | 1 |
extraosseous chondrosarcoma | 4.07e-08 | 1 |
myxoid chondrosarcoma | 4.07e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 4.07e-08 | 1 |
ovary epithelial cancer | 4.35e-08 | 1 |
mucinous adenocarcinoma | 6.10e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.