FFCP PHASE1:Mm9::chr5:138530511..138530523,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=8|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:138530511..138530523,+|id=chr5:138530511..138530523,+|ontology_enrichment_celltype=CL:0002563!1.03e-10!9;CL:0002251!1.03e-10!9;CL:0000223!9.28e-09!20;CL:0000066!1.34e-08!25;CL:0000239!5.23e-08!6;CL:0000677!5.23e-08!6;CL:0000212!5.23e-08!6;CL:0000584!5.23e-08!6|ontology_enrichment_celltype_v019_2=CL:0000223,7.92e-08,20;CL:0000182,2.63e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009854!6.59e-25!23;UBERON:0009856!6.59e-25!23;UBERON:0002107!1.04e-23!22;UBERON:0007499!1.04e-23!22;UBERON:0006925!1.04e-23!22;UBERON:0009497!1.04e-23!22;UBERON:0000015!1.04e-23!22;UBERON:0002423!1.04e-23!22;UBERON:0006235!1.04e-23!22;UBERON:0008835!1.04e-23!22;UBERON:0003894!1.04e-23!22;UBERON:0004161!1.04e-23!22;UBERON:0008836!1.04e-23!22;UBERON:0002365!5.40e-20!25;UBERON:0002330!5.40e-20!25;UBERON:0005172!1.84e-17!49;UBERON:0005173!1.84e-17!49;UBERON:0002417!1.84e-17!49;UBERON:0000916!1.84e-17!49;UBERON:0003929!1.40e-14!55;UBERON:0003350!1.03e-10!9;UBERON:0004808!1.03e-10!9;UBERON:0001277!1.03e-10!9;UBERON:0000490!1.32e-10!66;UBERON:0009569!1.51e-10!66;UBERON:0001007!7.71e-10!128;UBERON:0001555!7.71e-10!128;UBERON:0007026!7.71e-10!128;UBERON:0005911!9.27e-10!69;UBERON:0004921!1.40e-09!126;UBERON:0004185!1.40e-09!126;UBERON:0004119!1.72e-09!130;UBERON:0000925!1.72e-09!130;UBERON:0006595!1.72e-09!130;UBERON:0003914!4.12e-09!47;UBERON:0005256!4.32e-09!47;UBERON:0000485!2.38e-08!11;UBERON:0005057!3.26e-07!51;UBERON:0001242!1.00e-06!13;UBERON:0000060!1.00e-06!13;UBERON:0001262!1.00e-06!13;UBERON:0004786!1.00e-06!13|ontology_enrichment_uberon_v019_2=UBERON:0009854,1.31e-32,23;UBERON:0009856,1.31e-32,23;UBERON:0002107,7.05e-30,22;UBERON:0007499,7.05e-30,22;UBERON:0006925,7.05e-30,22;UBERON:0009497,7.05e-30,22;UBERON:0000015,7.05e-30,22;UBERON:0002423,7.05e-30,22;UBERON:0006235,7.05e-30,22;UBERON:0008835,7.05e-30,22;UBERON:0003894,7.05e-30,22;UBERON:0004161,7.05e-30,22;UBERON:0008836,7.05e-30,22;UBERON:0002365,5.79e-26,25;UBERON:0002330,5.79e-26,25;UBERON:0005172,7.67e-18,49;UBERON:0005173,7.67e-18,49;UBERON:0002417,7.67e-18,49;UBERON:0000916,7.67e-18,49;UBERON:0003929,1.04e-17,55;UBERON:0000490,3.63e-14,66;UBERON:0003104,1.14e-13,61;UBERON:0009142,1.14e-13,61;UBERON:0005911,2.14e-13,69;UBERON:0005256,3.42e-13,45;UBERON:0003914,1.64e-12,47;UBERON:0009569,2.22e-12,66;UBERON:0005177,8.66e-10,79;UBERON:0004921,9.11e-10,114;UBERON:0001007,1.58e-09,116;UBERON:0001555,1.58e-09,116;UBERON:0007026,1.58e-09,116;UBERON:0004119,2.68e-09,118;UBERON:0000925,2.68e-09,118;UBERON:0006595,2.68e-09,118;UBERON:0002368,3.35e-09,60;UBERON:0002530,2.79e-08,65;UBERON:0002100,3.51e-08,90;UBERON:0001041,3.17e-07,80;UBERON:0000949,3.28e-07,72|phase1_expression=0,2.09385244583617,0.454999239389536,3.0246421130683,2.00358291978539,0.503637815735669,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0,0.57423196411502,0,0.215471232685889,0,0,0,0,0,0,0.866554859253824,0.166234645358492,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,4.30211938490693,0,6.47643829965381,3.89865850468601,4.92829575807069,1.96622188184453,0,0,0,0,0,0,0,0,0,0,2.8545969929765,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0.19496408711912,0,1.29682829924817,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0.822074982615345,1.47610147979602,1.8839847340965,1.85095745882701,4.44678940630723,0.166845105716094,0.196558995113203,0.449724224769707,0.202860121388503,0.241177159752417,0.25462585178142,2.01387296215567,1.13494658742525,2.74561413188081,8.62609239164127,4.46569137202204,3.12037673114561,3.53610429125956,3.94674309748207,7.23665282045051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.330613822901344,1.04702376793612,0.648074866458964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0.505394423527595,0.25347929989024,0,0.187283014939765,0.192075457214608,0.0574354689556133,0.476293691283074,0.115884325944855,0,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.282328141245992,0,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0.701794825336225,0,0,0,0|short_description=p@chr5:138530511..138530523,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:138530511..138530523,+ | |||
|id=chr5:138530511..138530523,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.03e-10!9;CL:0002251!1.03e-10!9;CL:0000223!9.28e-09!20;CL:0000066!1.34e-08!25;CL:0000239!5.23e-08!6;CL:0000677!5.23e-08!6;CL:0000212!5.23e-08!6;CL:0000584!5.23e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,7.92e-08,20;CL:0000182,2.63e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!6.59e-25!23;UBERON:0009856!6.59e-25!23;UBERON:0002107!1.04e-23!22;UBERON:0007499!1.04e-23!22;UBERON:0006925!1.04e-23!22;UBERON:0009497!1.04e-23!22;UBERON:0000015!1.04e-23!22;UBERON:0002423!1.04e-23!22;UBERON:0006235!1.04e-23!22;UBERON:0008835!1.04e-23!22;UBERON:0003894!1.04e-23!22;UBERON:0004161!1.04e-23!22;UBERON:0008836!1.04e-23!22;UBERON:0002365!5.40e-20!25;UBERON:0002330!5.40e-20!25;UBERON:0005172!1.84e-17!49;UBERON:0005173!1.84e-17!49;UBERON:0002417!1.84e-17!49;UBERON:0000916!1.84e-17!49;UBERON:0003929!1.40e-14!55;UBERON:0003350!1.03e-10!9;UBERON:0004808!1.03e-10!9;UBERON:0001277!1.03e-10!9;UBERON:0000490!1.32e-10!66;UBERON:0009569!1.51e-10!66;UBERON:0001007!7.71e-10!128;UBERON:0001555!7.71e-10!128;UBERON:0007026!7.71e-10!128;UBERON:0005911!9.27e-10!69;UBERON:0004921!1.40e-09!126;UBERON:0004185!1.40e-09!126;UBERON:0004119!1.72e-09!130;UBERON:0000925!1.72e-09!130;UBERON:0006595!1.72e-09!130;UBERON:0003914!4.12e-09!47;UBERON:0005256!4.32e-09!47;UBERON:0000485!2.38e-08!11;UBERON:0005057!3.26e-07!51;UBERON:0001242!1.00e-06!13;UBERON:0000060!1.00e-06!13;UBERON:0001262!1.00e-06!13;UBERON:0004786!1.00e-06!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,1.31e-32,23;UBERON:0009856,1.31e-32,23;UBERON:0002107,7.05e-30,22;UBERON:0007499,7.05e-30,22;UBERON:0006925,7.05e-30,22;UBERON:0009497,7.05e-30,22;UBERON:0000015,7.05e-30,22;UBERON:0002423,7.05e-30,22;UBERON:0006235,7.05e-30,22;UBERON:0008835,7.05e-30,22;UBERON:0003894,7.05e-30,22;UBERON:0004161,7.05e-30,22;UBERON:0008836,7.05e-30,22;UBERON:0002365,5.79e-26,25;UBERON:0002330,5.79e-26,25;UBERON:0005172,7.67e-18,49;UBERON:0005173,7.67e-18,49;UBERON:0002417,7.67e-18,49;UBERON:0000916,7.67e-18,49;UBERON:0003929,1.04e-17,55;UBERON:0000490,3.63e-14,66;UBERON:0003104,1.14e-13,61;UBERON:0009142,1.14e-13,61;UBERON:0005911,2.14e-13,69;UBERON:0005256,3.42e-13,45;UBERON:0003914,1.64e-12,47;UBERON:0009569,2.22e-12,66;UBERON:0005177,8.66e-10,79;UBERON:0004921,9.11e-10,114;UBERON:0001007,1.58e-09,116;UBERON:0001555,1.58e-09,116;UBERON:0007026,1.58e-09,116;UBERON:0004119,2.68e-09,118;UBERON:0000925,2.68e-09,118;UBERON:0006595,2.68e-09,118;UBERON:0002368,3.35e-09,60;UBERON:0002530,2.79e-08,65;UBERON:0002100,3.51e-08,90;UBERON:0001041,3.17e-07,80;UBERON:0000949,3.28e-07,72 | |||
|phase1_expression=0,2.09385244583617,0.454999239389536,3.0246421130683,2.00358291978539,0.503637815735669,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0,0.57423196411502,0,0.215471232685889,0,0,0,0,0,0,0.866554859253824,0.166234645358492,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,4.30211938490693,0,6.47643829965381,3.89865850468601,4.92829575807069,1.96622188184453,0,0,0,0,0,0,0,0,0,0,2.8545969929765,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0.19496408711912,0,1.29682829924817,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0.822074982615345,1.47610147979602,1.8839847340965,1.85095745882701,4.44678940630723,0.166845105716094,0.196558995113203,0.449724224769707,0.202860121388503,0.241177159752417,0.25462585178142,2.01387296215567,1.13494658742525,2.74561413188081,8.62609239164127,4.46569137202204,3.12037673114561,3.53610429125956,3.94674309748207,7.23665282045051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.330613822901344,1.04702376793612,0.648074866458964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0.505394423527595,0.25347929989024,0,0.187283014939765,0.192075457214608,0.0574354689556133,0.476293691283074,0.115884325944855,0,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.282328141245992,0,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0.701794825336225,0,0,0,0 | |||
|short_description=p@chr5:138530511..138530523,+ | |||
}} |
Revision as of 06:49, 14 September 2013
Short description: | p@chr5:138530511..138530523, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:138530511..138530523, + |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 7.92e-08 | 20 |
hepatocyte | 2.63e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.