FFCP PHASE1:Hg19::chr9:116840569..116840588,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=259|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=453|TSSclassifier=W|UniProt=P02760|association_with_transcript=163bp_to_ENST00000265132,NM_001633,uc004bie.3,uc010mvc.1_5end|coexpression_cluster_id=C5|description=CAGE_peak_1_at_AMBP_5end|id=chr9:116840569..116840588,-|ontology_enrichment_celltype=CL:0000181!3.11e-15!12;CL:0000417!3.11e-15!12;CL:0000668!3.11e-15!12;CL:0000414!3.11e-15!12;CL:0000412!3.11e-15!12;CL:0000182!3.11e-15!12|ontology_enrichment_celltype_v019=CL:0000182;1.24e-28;12|ontology_enrichment_celltype_v019_2=CL:0000182,1.26e-28,12;CL:0000223,3.05e-09,58|ontology_enrichment_development_v019=UBERON:0004161;4.14e-31;11!UBERON:0009497;3.91e-26;13!UBERON:0003104;3.88e-15;31!UBERON:0001041;3.47e-08;30!CL:0000223;7.70e-07;58!UBERON:0006242;8.97e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009854!7.08e-19!23;UBERON:0009497!2.34e-17!25;UBERON:0000015!2.34e-17!25;UBERON:0002423!2.34e-17!25;UBERON:0006235!2.34e-17!25;UBERON:0004161!2.34e-17!25;UBERON:0002107!2.87e-17!19;UBERON:0006925!2.87e-17!19;UBERON:0008836!2.87e-17!19;UBERON:0008835!4.42e-17!22;UBERON:0003894!4.42e-17!22;UBERON:0005057!1.32e-16!26;UBERON:0009856!2.63e-16!26;UBERON:0007499!1.15e-14!25;UBERON:0002365!3.52e-13!31;UBERON:0002330!3.52e-13!31;UBERON:0003929!8.29e-13!54;UBERON:0002368!2.48e-11!35;UBERON:0000949!5.93e-11!45;UBERON:0005172!8.49e-10!55;UBERON:0005173!8.49e-10!55;UBERON:0004921!1.67e-09!129;UBERON:0004185!1.67e-09!129;UBERON:0005911!9.01e-09!82;UBERON:0002530!1.39e-08!59;UBERON:0002417!1.92e-08!61;UBERON:0000916!1.92e-08!61;UBERON:0001007!2.85e-08!155;UBERON:0001555!2.85e-08!155;UBERON:0007026!2.85e-08!155;UBERON:0000077!4.93e-07!130;UBERON:0004119!5.15e-07!169;UBERON:0000925!5.15e-07!169;UBERON:0006595!5.15e-07!169;UBERON:0005409!7.08e-07!35|ontology_enrichment_uberon_v019=UBERON:0002107;2.40e-33;19!UBERON:0006925;2.40e-33;19!UBERON:0002423;1.44e-29;25!UBERON:0002365;3.13e-19;31!UBERON:0002330;3.13e-19;31!UBERON:0002368;6.74e-17;33!UBERON:0000949;1.57e-12;43!UBERON:0005172;1.72e-11;52!UBERON:0005173;1.72e-11;52!UBERON:0002417;1.57e-08;58!UBERON:0000916;1.57e-08;58!UBERON:0001007;2.54e-07;81!UBERON:0000922;6.81e-07;49!UBERON:0002530;9.18e-07;57|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.44e-33,19;UBERON:0006925,2.44e-33,19;UBERON:0008836,2.44e-33,19;UBERON:0009497,1.45e-29,25;UBERON:0000015,1.45e-29,25;UBERON:0002423,1.45e-29,25;UBERON:0006235,1.45e-29,25;UBERON:0004161,1.45e-29,25;UBERON:0008835,1.71e-28,22;UBERON:0003894,1.71e-28,22;UBERON:0009854,3.70e-27,23;UBERON:0007499,8.26e-25,25;UBERON:0009856,9.04e-24,26;UBERON:0002365,1.40e-19,31;UBERON:0002330,1.40e-19,31;UBERON:0005172,1.65e-19,54;UBERON:0005173,1.65e-19,54;UBERON:0002417,3.14e-17,60;UBERON:0000916,3.14e-17,60;UBERON:0002368,4.33e-17,35;UBERON:0003929,6.18e-17,54;UBERON:0000949,2.62e-15,45;UBERON:0002530,5.15e-11,59;UBERON:0005177,2.48e-10,101;UBERON:0005911,3.89e-10,82;UBERON:0004921,3.12e-08,118;UBERON:0009569,9.41e-08,112;UBERON:0001007,4.57e-07,145;UBERON:0001555,4.57e-07,145;UBERON:0007026,4.57e-07,145;UBERON:0001041,9.53e-07,87|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8006355312415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04574548582567,0.829288440122964,1.26160425437814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.231480226628,0,12638.7445220848,7634.6018191518,4344.07818382836,0,26.4425142867694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69203229428271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3996.03347271032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.75894634753143,0.349934720244983,0,0,0,3890.02184809651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0.276283915531148,361.019627675178,0,0,0,0,0.179021174675609,0,0,0,0,166.725232328378,0,1.99613798001194,0.7812832832557,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0.565412285735763,0,0,0.353830258013357,0,0,0,0,0.202203398942031,0,0.468528891450678,0,0,0,0,22.9882360492461,0.30607276163049,0,0,0,0,0,0,0,1.99226682220855,0,0.173559738335131,0,0,1.7472666824203,0,0,0.146178634172371,0,0,0,0.225980740780532,0,0,0,0,0,96.0538476327087,0,0,0,4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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=259 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=453 | |||
|TSSclassifier=W | |||
|UniProt=P02760 | |||
|association_with_transcript=163bp_to_ENST00000265132,NM_001633,uc004bie.3,uc010mvc.1_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_AMBP_5end | |||
|id=chr9:116840569..116840588,- | |||
|ontology_enrichment_celltype=CL:0000181!3.11e-15!12;CL:0000417!3.11e-15!12;CL:0000668!3.11e-15!12;CL:0000414!3.11e-15!12;CL:0000412!3.11e-15!12;CL:0000182!3.11e-15!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.24e-28;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.26e-28,12;CL:0000223,3.05e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.14e-31;11!UBERON:0009497;3.91e-26;13!UBERON:0003104;3.88e-15;31!UBERON:0001041;3.47e-08;30!CL:0000223;7.70e-07;58!UBERON:0006242;8.97e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!7.08e-19!23;UBERON:0009497!2.34e-17!25;UBERON:0000015!2.34e-17!25;UBERON:0002423!2.34e-17!25;UBERON:0006235!2.34e-17!25;UBERON:0004161!2.34e-17!25;UBERON:0002107!2.87e-17!19;UBERON:0006925!2.87e-17!19;UBERON:0008836!2.87e-17!19;UBERON:0008835!4.42e-17!22;UBERON:0003894!4.42e-17!22;UBERON:0005057!1.32e-16!26;UBERON:0009856!2.63e-16!26;UBERON:0007499!1.15e-14!25;UBERON:0002365!3.52e-13!31;UBERON:0002330!3.52e-13!31;UBERON:0003929!8.29e-13!54;UBERON:0002368!2.48e-11!35;UBERON:0000949!5.93e-11!45;UBERON:0005172!8.49e-10!55;UBERON:0005173!8.49e-10!55;UBERON:0004921!1.67e-09!129;UBERON:0004185!1.67e-09!129;UBERON:0005911!9.01e-09!82;UBERON:0002530!1.39e-08!59;UBERON:0002417!1.92e-08!61;UBERON:0000916!1.92e-08!61;UBERON:0001007!2.85e-08!155;UBERON:0001555!2.85e-08!155;UBERON:0007026!2.85e-08!155;UBERON:0000077!4.93e-07!130;UBERON:0004119!5.15e-07!169;UBERON:0000925!5.15e-07!169;UBERON:0006595!5.15e-07!169;UBERON:0005409!7.08e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.40e-33;19!UBERON:0006925;2.40e-33;19!UBERON:0002423;1.44e-29;25!UBERON:0002365;3.13e-19;31!UBERON:0002330;3.13e-19;31!UBERON:0002368;6.74e-17;33!UBERON:0000949;1.57e-12;43!UBERON:0005172;1.72e-11;52!UBERON:0005173;1.72e-11;52!UBERON:0002417;1.57e-08;58!UBERON:0000916;1.57e-08;58!UBERON:0001007;2.54e-07;81!UBERON:0000922;6.81e-07;49!UBERON:0002530;9.18e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.44e-33,19;UBERON:0006925,2.44e-33,19;UBERON:0008836,2.44e-33,19;UBERON:0009497,1.45e-29,25;UBERON:0000015,1.45e-29,25;UBERON:0002423,1.45e-29,25;UBERON:0006235,1.45e-29,25;UBERON:0004161,1.45e-29,25;UBERON:0008835,1.71e-28,22;UBERON:0003894,1.71e-28,22;UBERON:0009854,3.70e-27,23;UBERON:0007499,8.26e-25,25;UBERON:0009856,9.04e-24,26;UBERON:0002365,1.40e-19,31;UBERON:0002330,1.40e-19,31;UBERON:0005172,1.65e-19,54;UBERON:0005173,1.65e-19,54;UBERON:0002417,3.14e-17,60;UBERON:0000916,3.14e-17,60;UBERON:0002368,4.33e-17,35;UBERON:0003929,6.18e-17,54;UBERON:0000949,2.62e-15,45;UBERON:0002530,5.15e-11,59;UBERON:0005177,2.48e-10,101;UBERON:0005911,3.89e-10,82;UBERON:0004921,3.12e-08,118;UBERON:0009569,9.41e-08,112;UBERON:0001007,4.57e-07,145;UBERON:0001555,4.57e-07,145;UBERON:0007026,4.57e-07,145;UBERON:0001041,9.53e-07,87 | |||
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|short_description=p1@AMBP | |||
}} |
Revision as of 07:05, 14 September 2013
Short description: | p1@AMBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AMBP_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 163bp_to_ENST00000265132, NM_001633, uc004bie.3, uc010mvc.1_5end |
EntrezGene: | AMBP |
HGNC: | 453 |
UniProt: | P02760 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.26e-28 | 12 |
endodermal cell | 3.05e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 2.44e-33 | 19 |
digestive gland | 2.44e-33 | 19 |
liver bud | 2.44e-33 | 19 |
epithelium of foregut-midgut junction | 1.45e-29 | 25 |
anatomical boundary | 1.45e-29 | 25 |
hepatobiliary system | 1.45e-29 | 25 |
foregut-midgut junction | 1.45e-29 | 25 |
septum transversum | 1.45e-29 | 25 |
hepatic diverticulum | 1.71e-28 | 22 |
liver primordium | 1.71e-28 | 22 |
digestive tract diverticulum | 3.70e-27 | 23 |
epithelial sac | 8.26e-25 | 25 |
sac | 9.04e-24 | 26 |
exocrine gland | 1.40e-19 | 31 |
exocrine system | 1.40e-19 | 31 |
abdomen element | 1.65e-19 | 54 |
abdominal segment element | 1.65e-19 | 54 |
abdominal segment of trunk | 3.14e-17 | 60 |
abdomen | 3.14e-17 | 60 |
endocrine gland | 4.33e-17 | 35 |
gut epithelium | 6.18e-17 | 54 |
endocrine system | 2.62e-15 | 45 |
gland | 5.15e-11 | 59 |
trunk region element | 2.48e-10 | 101 |
endo-epithelium | 3.89e-10 | 82 |
subdivision of digestive tract | 3.12e-08 | 118 |
subdivision of trunk | 9.41e-08 | 112 |
digestive system | 4.57e-07 | 145 |
digestive tract | 4.57e-07 | 145 |
primitive gut | 4.57e-07 | 145 |
foregut | 9.53e-07 | 87 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.