FFCP PHASE1:Mm9::chr6:52167459..52167492,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=15404|HGNC=|UniProt=|association_with_transcript=-8bp_to_ENSMUST00000140316_5end|description=CAGE_peak_1_at_Hoxa7_5end|id=chr6:52167459..52167492,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000489!1.10e-11!21;UBERON:0006554!4.09e-07!16;UBERON:0002113!4.29e-07!14;UBERON:0003918!4.29e-07!14;UBERON:0005095!4.29e-07!14;UBERON:0007687!4.29e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0000489,1.10e-14,21;UBERON:0002113,7.58e-09,14;UBERON:0003918,7.58e-09,14;UBERON:0011143,7.58e-09,14;UBERON:0005095,7.58e-09,14;UBERON:0007687,7.58e-09,14;UBERON:0002240,3.20e-07,6;UBERON:0005174,3.20e-07,6;UBERON:0001137,3.20e-07,6;UBERON:0006554,7.96e-07,18|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,1.61582251287033,18.6666988257664,21.9407822876706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.709638518536602,0.183546752161682,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,1.7997994345628,1.97773272513395,1.4209602298922,0,0,0,0,0,15.996455126613,31.5842013560807,0,0,0.919218786610021,0,0,0,0,0,0,0,0,0,16.2045722010517,12.2439645487229,29.0783135487469,0.151452386666368,0,0.289864488701678,0,0,0,0,0,1.40444420131752,0.511290967734173,1.03914401841148,1.06001872353102,0,0,2.54805239706646,0,0,0,0,2.51204535381932,1.03575153458869,1.48442139064825,3.81667718885499,3.95805121805784,2.7673859670727,1.65794904607885,0.705532242814229,1.13099932196708,0,5.49477556295664,0.884610551949874,1.13236794963186,0.883366073841574,0.484875253135222,3.72783522436244,0,0,0.255457055208591,2.27648736561249,0.599902730993408,1.39777249780371,0,0,0,0,0,0,0,5.6011650117674,2.23932547098167,3.0326731012041,0,0.130120442962704,0,0,0,0,0,0,0,3.66465587985832,5.67318240503458,2.81521798662318,3.5071317188412,0.834141747676794,1.0447564995665,0.61734640922383,10.9468846750171,0.702213187313235,0,0.852490498186778,0,0.234526059981096,0.720248245844059,0.23674473558521,0.196764231747404,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,6.18535926552179,3.25131340604614,1.15980715189884,1.21010114774006,0.889512175379481,0,0,0.658795818896044,0.251335208800269,0.596869416123452,0.58489226135736,0.898819408654221,0.216138049874694,0,3.41402221715547,3.77020091612105,4.50830942692322,4.68398054044223,3.49114476901726,2.73529697572242,6.9560190836683,9.44704947069454,7.37894020854462,11.2291419168838,0,0.83422552858047,0.196558995113203,0,0,0.482354319504834,0,0,0,0,1.43768206527355,0,0,0,0,0,0.923765950833023,1.32643988239339,2.44447464663039,1.86719594352707,1.40814148973101,1.17254380209271,1.6663054862021,0.780534591431195,0.788175720530955,1.7717175171902,1.43509291791738,0.491589944147214,0.518054945597687,0.144649058581512,0,0,0,0.551873492609465,1.9266070798535,0.703270119553219,14.0984053023941,0.504941854408746,1.26203287766503,1.95219372148319,4.73931475012158,0,0,0,0.809621403349789,0,0,0,2.12910127812403,9.08134578703002,3.58351310577867,9.40329700943452,0,0.728341908464944,0.906970670894253,0.377210159511796,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0.441056796109924,11.8718102117866,7.75029248140347,7.53911561601948,6.32673423216623,4.10352249362653,0.874442509889552,21.6947603352296,0,2.06386867963222,0.925972636848558,0.188368457004691,0,0,3.56954702987096,5.17820373597535,3.45499934511059,0.954670618015114,15.3422956886851,7.31950081656655,5.07625101862466,6.27264888043406,2.62035076495413,2.69728692769641,1.32245529160537,0.26175594198403,0.259229946583586,0,0,1.04661582230785,0.496375471371293,0.194451188344048,1.54991788173277,0,0.234714477291508,0.781226309063701,0,0,0,0.632022241256357,0.810900861160657,0.821687657318618,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0.15241361331,0.403304740547362,0.194915761479505,0.481059208201647,0.467507608726276,0,0,0,0,1.9318959403219,0.187682475451182,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,10.3787347584177,7.58147259461959,9.39034831647738,4.37592090722929,5.03071590307158,2.5738091183002,3.33370091702423,2.67845574410562,2.88827288632634,3.28506375292937,3.29523089857312,1.32038438970253,1.591905626988,2.11283002936069,1.78049953762401,2.38146845641537,1.15884325944855,1.73618298417335,1.64834360321323,2.20798380201596,3.42869252385415,1.95223386775271,1.66905332963125,1.59881058295561,1.78807822789128,1.01537529470012,2.19513567447327,1.8414879800649,2.30866993537965,1.68342681497322,3.2031454893527,1.28055827088233,3.27384834535751,1.23949472948773,2.89359916471712,0,2.10538447600868,2.36358159453128,3.63447830930802,1.98532277207564,3.2461496986859|short_description=p1@Hoxa7}} | ||
|EntrezGene=15404 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=-8bp_to_ENSMUST00000140316_5end | |||
|description=CAGE_peak_1_at_Hoxa7_5end | |||
|id=chr6:52167459..52167492,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!1.10e-11!21;UBERON:0006554!4.09e-07!16;UBERON:0002113!4.29e-07!14;UBERON:0003918!4.29e-07!14;UBERON:0005095!4.29e-07!14;UBERON:0007687!4.29e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,1.10e-14,21;UBERON:0002113,7.58e-09,14;UBERON:0003918,7.58e-09,14;UBERON:0011143,7.58e-09,14;UBERON:0005095,7.58e-09,14;UBERON:0007687,7.58e-09,14;UBERON:0002240,3.20e-07,6;UBERON:0005174,3.20e-07,6;UBERON:0001137,3.20e-07,6;UBERON:0006554,7.96e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,1.61582251287033,18.6666988257664,21.9407822876706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.709638518536602,0.183546752161682,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,1.7997994345628,1.97773272513395,1.4209602298922,0,0,0,0,0,15.996455126613,31.5842013560807,0,0,0.919218786610021,0,0,0,0,0,0,0,0,0,16.2045722010517,12.2439645487229,29.0783135487469,0.151452386666368,0,0.289864488701678,0,0,0,0,0,1.40444420131752,0.511290967734173,1.03914401841148,1.06001872353102,0,0,2.54805239706646,0,0,0,0,2.51204535381932,1.03575153458869,1.48442139064825,3.81667718885499,3.95805121805784,2.7673859670727,1.65794904607885,0.705532242814229,1.13099932196708,0,5.49477556295664,0.884610551949874,1.13236794963186,0.883366073841574,0.484875253135222,3.72783522436244,0,0,0.255457055208591,2.27648736561249,0.599902730993408,1.39777249780371,0,0,0,0,0,0,0,5.6011650117674,2.23932547098167,3.0326731012041,0,0.130120442962704,0,0,0,0,0,0,0,3.66465587985832,5.67318240503458,2.81521798662318,3.5071317188412,0.834141747676794,1.0447564995665,0.61734640922383,10.9468846750171,0.702213187313235,0,0.852490498186778,0,0.234526059981096,0.720248245844059,0.23674473558521,0.196764231747404,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,6.18535926552179,3.25131340604614,1.15980715189884,1.21010114774006,0.889512175379481,0,0,0.658795818896044,0.251335208800269,0.596869416123452,0.58489226135736,0.898819408654221,0.216138049874694,0,3.41402221715547,3.77020091612105,4.50830942692322,4.68398054044223,3.49114476901726,2.73529697572242,6.9560190836683,9.44704947069454,7.37894020854462,11.2291419168838,0,0.83422552858047,0.196558995113203,0,0,0.482354319504834,0,0,0,0,1.43768206527355,0,0,0,0,0,0.923765950833023,1.32643988239339,2.44447464663039,1.86719594352707,1.40814148973101,1.17254380209271,1.6663054862021,0.780534591431195,0.788175720530955,1.7717175171902,1.43509291791738,0.491589944147214,0.518054945597687,0.144649058581512,0,0,0,0.551873492609465,1.9266070798535,0.703270119553219,14.0984053023941,0.504941854408746,1.26203287766503,1.95219372148319,4.73931475012158,0,0,0,0.809621403349789,0,0,0,2.12910127812403,9.08134578703002,3.58351310577867,9.40329700943452,0,0.728341908464944,0.906970670894253,0.377210159511796,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0.441056796109924,11.8718102117866,7.75029248140347,7.53911561601948,6.32673423216623,4.10352249362653,0.874442509889552,21.6947603352296,0,2.06386867963222,0.925972636848558,0.188368457004691,0,0,3.56954702987096,5.17820373597535,3.45499934511059,0.954670618015114,15.3422956886851,7.31950081656655,5.07625101862466,6.27264888043406,2.62035076495413,2.69728692769641,1.32245529160537,0.26175594198403,0.259229946583586,0,0,1.04661582230785,0.496375471371293,0.194451188344048,1.54991788173277,0,0.234714477291508,0.781226309063701,0,0,0,0.632022241256357,0.810900861160657,0.821687657318618,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0.15241361331,0.403304740547362,0.194915761479505,0.481059208201647,0.467507608726276,0,0,0,0,1.9318959403219,0.187682475451182,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,10.3787347584177,7.58147259461959,9.39034831647738,4.37592090722929,5.03071590307158,2.5738091183002,3.33370091702423,2.67845574410562,2.88827288632634,3.28506375292937,3.29523089857312,1.32038438970253,1.591905626988,2.11283002936069,1.78049953762401,2.38146845641537,1.15884325944855,1.73618298417335,1.64834360321323,2.20798380201596,3.42869252385415,1.95223386775271,1.66905332963125,1.59881058295561,1.78807822789128,1.01537529470012,2.19513567447327,1.8414879800649,2.30866993537965,1.68342681497322,3.2031454893527,1.28055827088233,3.27384834535751,1.23949472948773,2.89359916471712,0,2.10538447600868,2.36358159453128,3.63447830930802,1.98532277207564,3.2461496986859 | |||
|short_description=p1@Hoxa7 | |||
}} |
Revision as of 10:17, 14 September 2013
Short description: | p1@Hoxa7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hoxa7_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_ENSMUST00000140316_5end |
EntrezGene: | Hoxa7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 1.10e-14 | 21 |
kidney | 7.58e-09 | 14 |
kidney mesenchyme | 7.58e-09 | 14 |
upper urinary tract | 7.58e-09 | 14 |
kidney rudiment | 7.58e-09 | 14 |
kidney field | 7.58e-09 | 14 |
spinal cord | 3.20e-07 | 6 |
dorsal region element | 3.20e-07 | 6 |
dorsum | 3.20e-07 | 6 |
urinary system structure | 7.96e-07 | 18 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.