FFCP PHASE1:Hg19::chrX:149009969..149009992,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4107|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6806|TSSclassifier=S|UniProt=P43361|association_with_transcript=-2bp_to_ENST00000286482_5end|coexpression_cluster_id=C114|description=CAGE_peak_1_at_MAGEA8_5end|id=chrX:149009969..149009992,+|ontology_enrichment_celltype=CL:0002541!6.06e-23!3;CL:0000039!7.79e-17!7;CL:0000586!7.79e-17!7|ontology_enrichment_celltype_v019=CL:0002541;2.95e-43;3!CL:0000039;6.90e-19;7!CL:0000586;6.90e-19;7!CL:0000349;2.93e-12;19|ontology_enrichment_celltype_v019_2=CL:0002541,2.95e-43,3;CL:0000039,6.70e-19,7;CL:0000586,6.70e-19,7;CL:0000349,3.02e-12,19|ontology_enrichment_development_v019=UBERON:0003124;1.16e-15;1|ontology_enrichment_disease=DOID:1036!2.26e-14!8;DOID:3095!1.89e-11!22;DOID:2994!1.89e-11!22;DOID:1799!7.01e-09!1;DOID:10165!7.01e-09!1;DOID:1798!7.01e-09!1|ontology_enrichment_disease_v019=DOID:1799;8.02e-16;1!DOID:10165;8.02e-16;1!DOID:1798;8.02e-16;1!DOID:3095;1.04e-10;22!DOID:2994;1.04e-10;22!DOID:3910;1.61e-08;2|ontology_enrichment_disease_v019_2=DOID:1799,8.63e-16,1;DOID:10165,8.63e-16,1;DOID:1798,8.63e-16,1;DOID:3095,1.03e-10,22;DOID:2994,1.03e-10,22;DOID:3910,1.61e-08,2|ontology_enrichment_uberon=UBERON:0000476!6.06e-23!3;UBERON:0000920!6.06e-23!3;UBERON:0003124!3.02e-17!7;UBERON:0005631!4.51e-13!14;UBERON:0000158!4.51e-13!14;UBERON:0000473!2.03e-08!8;UBERON:0001282!2.13e-08!1;UBERON:0009842!2.13e-08!1;UBERON:0003704!2.13e-08!1;UBERON:0001171!2.13e-08!1;UBERON:0001172!2.13e-08!1;UBERON:0000478!1.57e-07!24|ontology_enrichment_uberon_v019=UBERON:0003124;2.95e-43;3!UBERON:0000920;2.95e-43;3!UBERON:0005631;5.58e-23;10!UBERON:0000158;5.58e-23;10!UBERON:0000478;8.09e-15;24!UBERON:0004903;1.61e-08;2!UBERON:0002173;1.61e-08;2!UBERON:0002186;1.61e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.95e-43,3;UBERON:0003124,7.58e-33,7;UBERON:0005631,2.56e-25,14;UBERON:0000158,2.56e-25,14;UBERON:0000478,8.32e-15,24;UBERON:0004903,1.61e-08,2;UBERON:0002173,1.61e-08,2;UBERON:0002186,1.61e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7821073144885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01260162485693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,2.14870036263921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6786533122962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,14.9866537852239,2.42345639906385,4.78048436456836,7.65602783356607,4.48828207669125,12.7928346244472,0,0,0,0.225595660617181,0.392125068635479,1.51039428278258,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0477079461454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.33802279528805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327796715891087,16.9775991355326,0.101988829741982,0,0,0,0.227336094654718,0.267964130156178,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@MAGEA8}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4107 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6806 | |||
|TSSclassifier=S | |||
|UniProt=P43361 | |||
|association_with_transcript=-2bp_to_ENST00000286482_5end | |||
|coexpression_cluster_id=C114 | |||
|description=CAGE_peak_1_at_MAGEA8_5end | |||
|id=chrX:149009969..149009992,+ | |||
|ontology_enrichment_celltype=CL:0002541!6.06e-23!3;CL:0000039!7.79e-17!7;CL:0000586!7.79e-17!7 | |||
|ontology_enrichment_celltype_v019=CL:0002541;2.95e-43;3!CL:0000039;6.90e-19;7!CL:0000586;6.90e-19;7!CL:0000349;2.93e-12;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.95e-43,3;CL:0000039,6.70e-19,7;CL:0000586,6.70e-19,7;CL:0000349,3.02e-12,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.16e-15;1 | |||
|ontology_enrichment_disease=DOID:1036!2.26e-14!8;DOID:3095!1.89e-11!22;DOID:2994!1.89e-11!22;DOID:1799!7.01e-09!1;DOID:10165!7.01e-09!1;DOID:1798!7.01e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:1799;8.02e-16;1!DOID:10165;8.02e-16;1!DOID:1798;8.02e-16;1!DOID:3095;1.04e-10;22!DOID:2994;1.04e-10;22!DOID:3910;1.61e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,8.63e-16,1;DOID:10165,8.63e-16,1;DOID:1798,8.63e-16,1;DOID:3095,1.03e-10,22;DOID:2994,1.03e-10,22;DOID:3910,1.61e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000476!6.06e-23!3;UBERON:0000920!6.06e-23!3;UBERON:0003124!3.02e-17!7;UBERON:0005631!4.51e-13!14;UBERON:0000158!4.51e-13!14;UBERON:0000473!2.03e-08!8;UBERON:0001282!2.13e-08!1;UBERON:0009842!2.13e-08!1;UBERON:0003704!2.13e-08!1;UBERON:0001171!2.13e-08!1;UBERON:0001172!2.13e-08!1;UBERON:0000478!1.57e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.95e-43;3!UBERON:0000920;2.95e-43;3!UBERON:0005631;5.58e-23;10!UBERON:0000158;5.58e-23;10!UBERON:0000478;8.09e-15;24!UBERON:0004903;1.61e-08;2!UBERON:0002173;1.61e-08;2!UBERON:0002186;1.61e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.95e-43,3;UBERON:0003124,7.58e-33,7;UBERON:0005631,2.56e-25,14;UBERON:0000158,2.56e-25,14;UBERON:0000478,8.32e-15,24;UBERON:0004903,1.61e-08,2;UBERON:0002173,1.61e-08,2;UBERON:0002186,1.61e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7821073144885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01260162485693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,2.14870036263921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6786533122962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,14.9866537852239,2.42345639906385,4.78048436456836,7.65602783356607,4.48828207669125,12.7928346244472,0,0,0,0.225595660617181,0.392125068635479,1.51039428278258,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0477079461454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.33802279528805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327796715891087,16.9775991355326,0.101988829741982,0,0,0,0.227336094654718,0.267964130156178,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@MAGEA8 | |||
}} |
Revision as of 11:11, 14 September 2013
Short description: | p1@MAGEA8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MAGEA8_5end |
Coexpression cluster: | C114_teratocarcinoma_medulloblastoma_carcinosarcoma_iPS_anaplastic_acute_neuroblastoma |
Association with transcript: | -2bp_to_ENST00000286482_5end |
EntrezGene: | MAGEA8 |
HGNC: | 6806 |
UniProt: | P43361 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.95e-43 | 3 |
germ line cell | 6.70e-19 | 7 |
germ cell | 6.70e-19 | 7 |
extraembryonic cell | 3.02e-12 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.95e-43 | 3 |
chorion | 7.58e-33 | 7 |
extraembryonic membrane | 2.56e-25 | 14 |
membranous layer | 2.56e-25 | 14 |
extraembryonic structure | 8.32e-15 | 24 |
bronchoalveolar duct junction | 1.61e-08 | 2 |
alveolar duct | 1.61e-08 | 2 |
bronchiole | 1.61e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 8.63e-16 | 1 |
endocrine pancreas cancer | 8.63e-16 | 1 |
pancreatic endocrine carcinoma | 8.63e-16 | 1 |
germ cell and embryonal cancer | 1.03e-10 | 22 |
germ cell cancer | 1.03e-10 | 22 |
lung adenocarcinoma | 1.61e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.