FFCP PHASE1:Mm9::chr7:19989431..19989479,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=232943|HGNC=|UniProt=Q91W40|association_with_transcript=0bp_to_ENSMUST00000108458_5end|description=CAGE_peak_2_at_Klc3_5end|id=chr7:19989431..19989479,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000464!9.84e-13!57;UBERON:0001004!1.07e-11!42;UBERON:0000065!4.08e-11!41;UBERON:0000077!1.52e-08!97;UBERON:0002553!1.99e-07!39;UBERON:0001041!2.64e-07!92;UBERON:0000072!2.91e-07!27;UBERON:0003886!6.19e-07!38;UBERON:0004119!9.02e-07!130;UBERON:0000925!9.02e-07!130;UBERON:0006595!9.02e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0001004,2.80e-12,42;UBERON:0000065,1.59e-11,41;UBERON:0007811,8.03e-11,36;UBERON:0000153,3.61e-09,43;UBERON:0000072,1.01e-08,27;UBERON:0001264,8.43e-08,12;UBERON:0000007,1.19e-07,8;UBERON:0003296,1.19e-07,8;UBERON:0010133,1.19e-07,8;UBERON:0002553,3.08e-07,39;UBERON:0003408,4.76e-07,24;UBERON:0000949,4.91e-07,72;UBERON:0006562,6.16e-07,24;UBERON:0001557,6.16e-07,24;UBERON:0001042,6.16e-07,24;UBERON:0008814,6.16e-07,24;UBERON:0009145,6.16e-07,24|phase1_expression=3.84357233051505,1.04692622291808,0.909998478779072,0.60492842261366,0.500895729946347,1.34303417529512,0.233612640595526,11.3628524628587,0.422366166455,0.936258105287974,0.171217968225505,0.159544317990673,0.856003649656029,4.02133851127388,0.333109761815663,0.202475267389826,0,0.157731082679119,0.411343300817216,0,2.63634199468316,0.893618560807968,0.522399578277871,0.47997726838022,0.68822784320151,0.57423196411502,0,0.430942465371778,0.380046838912748,0.252030129759931,0.665191531965914,0.635030673459631,0.61506478758457,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0.485510353031154,0,0,0,0,0.218025156380447,0,0,0,0,0.671130424230945,0,0.336093799142464,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0.135005938331691,0,0,0.441737081903227,0.122490799214954,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,4.34796733052517,0,0,0,0,0,1.12355536105401,0,0,0,9.99988280414432,0,0,0,3.89683873820185,4.05375784760158,4.04419556011827,0.79928715803342,0,0.148442139064825,0,0,0,0,0.23517741427141,0.125666591329675,16.8092578059374,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0.407357455401265,1.7416975885413,7.32895999457657,2.31486041475121,0.390361328888111,0.459804208866946,0.180062129805349,3.0140963567143,2.58538696775046,2.8185018462667,5.99691037182265,6.72628763921441,0,0.567318240503458,0.351902248327898,0.876782929710299,1.39023624612799,0.696504333044333,1.85203922767149,0.995171334092466,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0.196764231747404,0,0,0,0.233530684734339,0,0,0,0,0,0,0,0,0.330418782983798,0,0.213288250535234,0.232236671860439,0.128867461322093,0.403367049246685,0,0.190225626112559,0.474529061544512,0.658795818896044,1.50801125280162,0.397912944082302,0.58489226135736,0,0.216138049874694,0.199141273254367,0.379335801906163,0.114248512609729,0,0.610953983535943,0.581857461502877,0.420814919341911,0.758838445491087,0.885660887877613,0.784993639206874,0.740382983530803,0,0,0,0,0.202860121388503,0,0.50925170356284,0.575392274901621,0,0,0,0,0.312037673114561,0.252578877947112,0,0,1.84753190166605,0.757965647081939,0.651859905768103,0.678980343100753,1.87752198630802,4.85768146581266,3.33261097240419,10.5372169843211,0.945810864637146,2.21464689648775,1.59454768657487,1.63863314715738,1.03610989119537,4.19482269886384,0,0,7.37646409528554,9.10591262805617,0,0,0,0,0,0,0,0,0,0,0,0.584511715822624,0.395287777946524,0.321321316421807,0.567760340833074,0.534196811001766,0.81443479676788,1.15479086080775,2.65490276679926,3.15614827001476,3.02323556964751,1.13163047853539,2.06711325016541,3.07435147943927,5.16856586336442,1.81766864738753,3.20847640546249,1.26414703174326,3.16255825724996,6.18813259489121,8.17055053809091,1.8006109403131,3.62204314591713,6.64444808597936,4.43350584105684,7.49149033928696,5.75921572107423,15.22324745573,2.3467170806371,2.96564899209348,0.882113592219848,16.488625294148,7.26589920131575,6.21223126760005,10.2660215842697,8.37118588699812,0.291480836629851,0,0,0.206386867963223,0,0.565105371014073,0.27338845544205,0,0.169978429993855,0,0,0.954670618015114,0.474503990371703,1.42323626988794,1.40406943068342,0.418176592028937,1.52853794622324,1.75323650300267,1.57041565878138,1.57053565190418,0,8.07741107013003,12.4012446510522,0.448549638131936,1.32366792365678,1.55560950675238,2.32487682259916,1.18269287843545,1.05621514781179,2.0832701575032,2.41176492179135,0.241584120826006,2.88030006257865,5.05617793005085,1.21635129174099,1.95150818613172,2.98817892848929,3.40150721768215,5.76175928865668,6.00977247599844,5.31682297828478,5.95702054694071,7.08723301891499,8.26774718122092,8.38137774361871,8.75527758926998,12.6227054356094,4.0811469050738,1.99787358036658,2.15313255862742,2.18250001273302,1.54551675225752,1.31377732815827,0.36630324853453,1.92931541171159,3.00943262421218,0,0.46032523650717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| ||
|EntrezGene=232943 | |||
|HGNC= | |||
|UniProt=Q91W40 | |||
|association_with_transcript=0bp_to_ENSMUST00000108458_5end | |||
|description=CAGE_peak_2_at_Klc3_5end | |||
|id=chr7:19989431..19989479,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000464!9.84e-13!57;UBERON:0001004!1.07e-11!42;UBERON:0000065!4.08e-11!41;UBERON:0000077!1.52e-08!97;UBERON:0002553!1.99e-07!39;UBERON:0001041!2.64e-07!92;UBERON:0000072!2.91e-07!27;UBERON:0003886!6.19e-07!38;UBERON:0004119!9.02e-07!130;UBERON:0000925!9.02e-07!130;UBERON:0006595!9.02e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,2.80e-12,42;UBERON:0000065,1.59e-11,41;UBERON:0007811,8.03e-11,36;UBERON:0000153,3.61e-09,43;UBERON:0000072,1.01e-08,27;UBERON:0001264,8.43e-08,12;UBERON:0000007,1.19e-07,8;UBERON:0003296,1.19e-07,8;UBERON:0010133,1.19e-07,8;UBERON:0002553,3.08e-07,39;UBERON:0003408,4.76e-07,24;UBERON:0000949,4.91e-07,72;UBERON:0006562,6.16e-07,24;UBERON:0001557,6.16e-07,24;UBERON:0001042,6.16e-07,24;UBERON:0008814,6.16e-07,24;UBERON:0009145,6.16e-07,24 | |||
|phase1_expression=3.84357233051505,1.04692622291808,0.909998478779072,0.60492842261366,0.500895729946347,1.34303417529512,0.233612640595526,11.3628524628587,0.422366166455,0.936258105287974,0.171217968225505,0.159544317990673,0.856003649656029,4.02133851127388,0.333109761815663,0.202475267389826,0,0.157731082679119,0.411343300817216,0,2.63634199468316,0.893618560807968,0.522399578277871,0.47997726838022,0.68822784320151,0.57423196411502,0,0.430942465371778,0.380046838912748,0.252030129759931,0.665191531965914,0.635030673459631,0.61506478758457,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0.485510353031154,0,0,0,0,0.218025156380447,0,0,0,0,0.671130424230945,0,0.336093799142464,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0.135005938331691,0,0,0.441737081903227,0.122490799214954,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,4.34796733052517,0,0,0,0,0,1.12355536105401,0,0,0,9.99988280414432,0,0,0,3.89683873820185,4.05375784760158,4.04419556011827,0.79928715803342,0,0.148442139064825,0,0,0,0,0.23517741427141,0.125666591329675,16.8092578059374,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0.407357455401265,1.7416975885413,7.32895999457657,2.31486041475121,0.390361328888111,0.459804208866946,0.180062129805349,3.0140963567143,2.58538696775046,2.8185018462667,5.99691037182265,6.72628763921441,0,0.567318240503458,0.351902248327898,0.876782929710299,1.39023624612799,0.696504333044333,1.85203922767149,0.995171334092466,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0.196764231747404,0,0,0,0.233530684734339,0,0,0,0,0,0,0,0,0.330418782983798,0,0.213288250535234,0.232236671860439,0.128867461322093,0.403367049246685,0,0.190225626112559,0.474529061544512,0.658795818896044,1.50801125280162,0.397912944082302,0.58489226135736,0,0.216138049874694,0.199141273254367,0.379335801906163,0.114248512609729,0,0.610953983535943,0.581857461502877,0.420814919341911,0.758838445491087,0.885660887877613,0.784993639206874,0.740382983530803,0,0,0,0,0.202860121388503,0,0.50925170356284,0.575392274901621,0,0,0,0,0.312037673114561,0.252578877947112,0,0,1.84753190166605,0.757965647081939,0.651859905768103,0.678980343100753,1.87752198630802,4.85768146581266,3.33261097240419,10.5372169843211,0.945810864637146,2.21464689648775,1.59454768657487,1.63863314715738,1.03610989119537,4.19482269886384,0,0,7.37646409528554,9.10591262805617,0,0,0,0,0,0,0,0,0,0,0,0.584511715822624,0.395287777946524,0.321321316421807,0.567760340833074,0.534196811001766,0.81443479676788,1.15479086080775,2.65490276679926,3.15614827001476,3.02323556964751,1.13163047853539,2.06711325016541,3.07435147943927,5.16856586336442,1.81766864738753,3.20847640546249,1.26414703174326,3.16255825724996,6.18813259489121,8.17055053809091,1.8006109403131,3.62204314591713,6.64444808597936,4.43350584105684,7.49149033928696,5.75921572107423,15.22324745573,2.3467170806371,2.96564899209348,0.882113592219848,16.488625294148,7.26589920131575,6.21223126760005,10.2660215842697,8.37118588699812,0.291480836629851,0,0,0.206386867963223,0,0.565105371014073,0.27338845544205,0,0.169978429993855,0,0,0.954670618015114,0.474503990371703,1.42323626988794,1.40406943068342,0.418176592028937,1.52853794622324,1.75323650300267,1.57041565878138,1.57053565190418,0,8.07741107013003,12.4012446510522,0.448549638131936,1.32366792365678,1.55560950675238,2.32487682259916,1.18269287843545,1.05621514781179,2.0832701575032,2.41176492179135,0.241584120826006,2.88030006257865,5.05617793005085,1.21635129174099,1.95150818613172,2.98817892848929,3.40150721768215,5.76175928865668,6.00977247599844,5.31682297828478,5.95702054694071,7.08723301891499,8.26774718122092,8.38137774361871,8.75527758926998,12.6227054356094,4.0811469050738,1.99787358036658,2.15313255862742,2.18250001273302,1.54551675225752,1.31377732815827,0.36630324853453,1.92931541171159,3.00943262421218,0,0.460325236507177,0,0,0,0,0.675022500231806,0,0,0,0,0,0.682934423016537,1.70174701947806,0,0.367687016900028,0.44449345560323,0,0.320919209591815,0.758091635291392,0.50695859978048,1.13175804831646,1.03005658216871,1.02440243847791,0.516919220600519,0.476293691283074,0.463537303779422,1.15745532278223,0,1.17759136107518,0,1.24233064311536,1.43061713968393,0.581385666529314,0.658765662907314,0.846146078916765,1.46342378298218,0.789209134313529,0.407412341537585,1.68342681497322,0.830445126869219,1.28055827088233,0.818462086339379,0.309873682371932,0.578719832943424,0.999242311751784,1.63752125911786,1.71896843238639,0.57386499620653,1.32354851471709,0 | |||
|short_description=p2@Klc3 | |||
}} |
Revision as of 12:41, 14 September 2013
Short description: | p2@Klc3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Klc3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000108458_5end |
EntrezGene: | Klc3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory system | 2.80e-12 | 42 |
respiratory tract | 1.59e-11 | 41 |
craniocervical region | 8.03e-11 | 36 |
anterior region of body | 3.61e-09 | 43 |
segment of respiratory tract | 1.01e-08 | 27 |
pancreas | 8.43e-08 | 12 |
pituitary gland | 1.19e-07 | 8 |
gland of diencephalon | 1.19e-07 | 8 |
neuroendocrine gland | 1.19e-07 | 8 |
anatomical cavity | 3.08e-07 | 39 |
gland of gut | 4.76e-07 | 24 |
endocrine system | 4.91e-07 | 72 |
pharynx | 6.16e-07 | 24 |
upper respiratory tract | 6.16e-07 | 24 |
chordate pharynx | 6.16e-07 | 24 |
pharyngeal arch system | 6.16e-07 | 24 |
pharyngeal region of foregut | 6.16e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.