FFCP PHASE1:Mm9::chr7:48816182..48816206,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=628359|HGNC=|MCL_coexpression_id=2468|UniProt=E9QAC5|association_with_transcript=0bp_to_ENSMUST00000073410_5end|description=CAGE_peak_1_at_Gm6871_5end|id=chr7:48816182..48816206,-|ontology_enrichment_celltype=CL:0000349!1.17e-09!3;CL:0000351!1.17e-09!3|ontology_enrichment_celltype_v019_2=CL:0000349,3.65e-14,3;CL:0000351,3.65e-14,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!3.02e-32!18;UBERON:0005564!3.02e-32!18;UBERON:0003133!1.69e-30!24;UBERON:0004176!8.92e-30!17;UBERON:0009196!8.92e-30!17;UBERON:0009117!8.92e-30!17;UBERON:0005156!7.55e-28!26;UBERON:0000990!7.55e-28!26;UBERON:0000473!3.25e-27!14;UBERON:0003135!3.18e-25!15;UBERON:0003101!1.75e-23!16;UBERON:0000079!1.75e-23!16;UBERON:0002323!6.40e-16!37;UBERON:0004458!6.40e-16!37;UBERON:0003886!2.10e-15!38;UBERON:0002553!6.45e-15!39;UBERON:0000464!2.33e-10!57;UBERON:0000358!1.17e-09!3;UBERON:0000307!1.17e-09!3|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.05e-17,14;UBERON:0003135,1.54e-16,15;UBERON:0003101,1.61e-15,16;UBERON:0000079,1.61e-15,16;UBERON:0004176,1.28e-14,17;UBERON:0009196,1.28e-14,17;UBERON:0009117,1.28e-14,17;UBERON:0003133,1.29e-14,24;UBERON:0000358,3.65e-14,3;UBERON:0000307,3.65e-14,3;UBERON:0007010,3.65e-14,3;UBERON:0000991,8.08e-14,18;UBERON:0005564,8.08e-14,18;UBERON:0005156,1.71e-13,26;UBERON:0000990,1.71e-13,26;UBERON:0002323,8.86e-07,37;UBERON:0004458,8.86e-07,37|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0.180062129805349,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17335854031855,0.63549621259146,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,1.34564891439581,0.330916980914195,0.777804753376191,0.516639293910924,0.337912250981556,0.821500670520278,2.21347454234715,5.34782656571125,4.34851417486811,2.30424005006292,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,2.88581739386284,0.986852422704233,3.8613461763738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p1@Gm6871}} | ||
|EntrezGene=628359 | |||
|HGNC= | |||
|MCL_coexpression_id=2468 | |||
|UniProt=E9QAC5 | |||
|association_with_transcript=0bp_to_ENSMUST00000073410_5end | |||
|description=CAGE_peak_1_at_Gm6871_5end | |||
|id=chr7:48816182..48816206,- | |||
|ontology_enrichment_celltype=CL:0000349!1.17e-09!3;CL:0000351!1.17e-09!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.65e-14,3;CL:0000351,3.65e-14,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!3.02e-32!18;UBERON:0005564!3.02e-32!18;UBERON:0003133!1.69e-30!24;UBERON:0004176!8.92e-30!17;UBERON:0009196!8.92e-30!17;UBERON:0009117!8.92e-30!17;UBERON:0005156!7.55e-28!26;UBERON:0000990!7.55e-28!26;UBERON:0000473!3.25e-27!14;UBERON:0003135!3.18e-25!15;UBERON:0003101!1.75e-23!16;UBERON:0000079!1.75e-23!16;UBERON:0002323!6.40e-16!37;UBERON:0004458!6.40e-16!37;UBERON:0003886!2.10e-15!38;UBERON:0002553!6.45e-15!39;UBERON:0000464!2.33e-10!57;UBERON:0000358!1.17e-09!3;UBERON:0000307!1.17e-09!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.05e-17,14;UBERON:0003135,1.54e-16,15;UBERON:0003101,1.61e-15,16;UBERON:0000079,1.61e-15,16;UBERON:0004176,1.28e-14,17;UBERON:0009196,1.28e-14,17;UBERON:0009117,1.28e-14,17;UBERON:0003133,1.29e-14,24;UBERON:0000358,3.65e-14,3;UBERON:0000307,3.65e-14,3;UBERON:0007010,3.65e-14,3;UBERON:0000991,8.08e-14,18;UBERON:0005564,8.08e-14,18;UBERON:0005156,1.71e-13,26;UBERON:0000990,1.71e-13,26;UBERON:0002323,8.86e-07,37;UBERON:0004458,8.86e-07,37 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0.180062129805349,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17335854031855,0.63549621259146,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,1.34564891439581,0.330916980914195,0.777804753376191,0.516639293910924,0.337912250981556,0.821500670520278,2.21347454234715,5.34782656571125,4.34851417486811,2.30424005006292,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,2.88581739386284,0.986852422704233,3.8613461763738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Gm6871 | |||
}} |
Revision as of 13:30, 14 September 2013
Short description: | p1@Gm6871 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm6871_5end |
Coexpression cluster: | MCL_coexpression_mm9:2468 |
Association with transcript: | 0bp_to_ENSMUST00000073410_5end |
EntrezGene: | Gm6871 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.65e-14 | 3 |
trophoblast cell | 3.65e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 1.05e-17 | 14 |
male reproductive organ | 1.54e-16 | 15 |
male organism | 1.61e-15 | 16 |
male reproductive system | 1.61e-15 | 16 |
external genitalia | 1.28e-14 | 17 |
indifferent external genitalia | 1.28e-14 | 17 |
indifferent gonad | 1.28e-14 | 17 |
reproductive organ | 1.29e-14 | 24 |
blastocyst | 3.65e-14 | 3 |
blastula | 3.65e-14 | 3 |
cleaving embryo | 3.65e-14 | 3 |
gonad | 8.08e-14 | 18 |
gonad primordium | 8.08e-14 | 18 |
reproductive structure | 1.71e-13 | 26 |
reproductive system | 1.71e-13 | 26 |
body cavity | 8.86e-07 | 37 |
body cavity or lining | 8.86e-07 | 37 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.