FFCP PHASE1:Mm9::chr7:93924463..93924472,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=53320|HGNC=|MCL_coexpression_id=11|UniProt=O35409,Q0VDM6|association_with_transcript=-89bp_to_ENSMUST00000001824,NM_001159706,NM_016770,uc009ifh.2,uc012fop.1_5end|description=CAGE_peak_5_at_Folh1_5end|id=chr7:93924463..93924472,-|ontology_enrichment_celltype=CL:0000128!3.15e-12!6;CL:0000126!3.15e-12!6;CL:0000127!3.15e-12!6;CL:0002453!4.26e-09!8;CL:0002603!2.01e-07!2;CL:0000333!3.26e-07!10;CL:0000095!3.26e-07!10;CL:0000243!3.26e-07!10;CL:0000123!3.26e-07!10;CL:0000125!3.26e-07!10;CL:0000030!3.26e-07!10;CL:0000339!3.26e-07!10|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!1.74e-12!14;UBERON:0003918!1.74e-12!14;UBERON:0005095!1.74e-12!14;UBERON:0007687!1.74e-12!14;UBERON:0000489!2.52e-12!21;UBERON:0006554!9.14e-11!16;UBERON:0001008!4.67e-10!17;UBERON:0001301!2.22e-09!3;UBERON:0006555!2.22e-09!3;UBERON:0005103!2.22e-09!3;UBERON:0000083!2.22e-09!3;UBERON:0009201!2.22e-09!3;UBERON:0004819!2.22e-09!3;UBERON:0006553!2.22e-09!3;UBERON:0003074!2.22e-09!3;UBERON:0003060!2.22e-09!3;UBERON:0003076!1.62e-08!12;UBERON:0003057!1.62e-08!12;UBERON:0004733!2.02e-08!6;UBERON:0004732!2.02e-08!6;UBERON:0002028!2.02e-08!6;UBERON:0007277!2.02e-08!6;UBERON:0002298!5.02e-08!6;UBERON:0002346!3.32e-07!71;UBERON:0003075!3.32e-07!71;UBERON:0007284!3.32e-07!71;UBERON:0000080!3.90e-07!4;UBERON:0005904!3.90e-07!4;UBERON:0006947!3.90e-07!4;UBERON:0002120!3.90e-07!4;UBERON:0004054!3.90e-07!4;UBERON:0004875!3.90e-07!4;UBERON:0004876!3.90e-07!4;UBERON:0005721!3.90e-07!4;UBERON:0005754!3.90e-07!4;UBERON:0007297!3.90e-07!4;UBERON:0001896!7.94e-07!2;UBERON:0005290!7.94e-07!2;UBERON:0010096!7.94e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.46e-25,14;UBERON:0003918,1.46e-25,14;UBERON:0011143,1.46e-25,14;UBERON:0005095,1.46e-25,14;UBERON:0007687,1.46e-25,14;UBERON:0006554,4.16e-20,18;UBERON:0001008,4.22e-19,19;UBERON:0000489,2.25e-17,21;UBERON:0003103,6.31e-09,43;UBERON:0001301,1.59e-08,3;UBERON:0006555,1.59e-08,3;UBERON:0005103,1.59e-08,3;UBERON:0000083,1.59e-08,3;UBERON:0009201,1.59e-08,3;UBERON:0004819,1.59e-08,3;UBERON:0006553,1.59e-08,3;UBERON:0003074,1.59e-08,3;UBERON:0003060,1.59e-08,3;UBERON:0005172,6.29e-08,49;UBERON:0005173,6.29e-08,49;UBERON:0002417,6.29e-08,49;UBERON:0000916,6.29e-08,49|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.65407546914134,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0.56276261003168,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0.203678727700633,0.124406970610093,3.28539585963777,0.631325567659422,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,3.54264355151045,1.8839847340965,10.3653617694312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p5@Folh1}} | ||
|EntrezGene=53320 | |||
|HGNC= | |||
|MCL_coexpression_id=11 | |||
|UniProt=O35409,Q0VDM6 | |||
|association_with_transcript=-89bp_to_ENSMUST00000001824,NM_001159706,NM_016770,uc009ifh.2,uc012fop.1_5end | |||
|description=CAGE_peak_5_at_Folh1_5end | |||
|id=chr7:93924463..93924472,- | |||
|ontology_enrichment_celltype=CL:0000128!3.15e-12!6;CL:0000126!3.15e-12!6;CL:0000127!3.15e-12!6;CL:0002453!4.26e-09!8;CL:0002603!2.01e-07!2;CL:0000333!3.26e-07!10;CL:0000095!3.26e-07!10;CL:0000243!3.26e-07!10;CL:0000123!3.26e-07!10;CL:0000125!3.26e-07!10;CL:0000030!3.26e-07!10;CL:0000339!3.26e-07!10 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!1.74e-12!14;UBERON:0003918!1.74e-12!14;UBERON:0005095!1.74e-12!14;UBERON:0007687!1.74e-12!14;UBERON:0000489!2.52e-12!21;UBERON:0006554!9.14e-11!16;UBERON:0001008!4.67e-10!17;UBERON:0001301!2.22e-09!3;UBERON:0006555!2.22e-09!3;UBERON:0005103!2.22e-09!3;UBERON:0000083!2.22e-09!3;UBERON:0009201!2.22e-09!3;UBERON:0004819!2.22e-09!3;UBERON:0006553!2.22e-09!3;UBERON:0003074!2.22e-09!3;UBERON:0003060!2.22e-09!3;UBERON:0003076!1.62e-08!12;UBERON:0003057!1.62e-08!12;UBERON:0004733!2.02e-08!6;UBERON:0004732!2.02e-08!6;UBERON:0002028!2.02e-08!6;UBERON:0007277!2.02e-08!6;UBERON:0002298!5.02e-08!6;UBERON:0002346!3.32e-07!71;UBERON:0003075!3.32e-07!71;UBERON:0007284!3.32e-07!71;UBERON:0000080!3.90e-07!4;UBERON:0005904!3.90e-07!4;UBERON:0006947!3.90e-07!4;UBERON:0002120!3.90e-07!4;UBERON:0004054!3.90e-07!4;UBERON:0004875!3.90e-07!4;UBERON:0004876!3.90e-07!4;UBERON:0005721!3.90e-07!4;UBERON:0005754!3.90e-07!4;UBERON:0007297!3.90e-07!4;UBERON:0001896!7.94e-07!2;UBERON:0005290!7.94e-07!2;UBERON:0010096!7.94e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.46e-25,14;UBERON:0003918,1.46e-25,14;UBERON:0011143,1.46e-25,14;UBERON:0005095,1.46e-25,14;UBERON:0007687,1.46e-25,14;UBERON:0006554,4.16e-20,18;UBERON:0001008,4.22e-19,19;UBERON:0000489,2.25e-17,21;UBERON:0003103,6.31e-09,43;UBERON:0001301,1.59e-08,3;UBERON:0006555,1.59e-08,3;UBERON:0005103,1.59e-08,3;UBERON:0000083,1.59e-08,3;UBERON:0009201,1.59e-08,3;UBERON:0004819,1.59e-08,3;UBERON:0006553,1.59e-08,3;UBERON:0003074,1.59e-08,3;UBERON:0003060,1.59e-08,3;UBERON:0005172,6.29e-08,49;UBERON:0005173,6.29e-08,49;UBERON:0002417,6.29e-08,49;UBERON:0000916,6.29e-08,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.65407546914134,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0.56276261003168,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0.203678727700633,0.124406970610093,3.28539585963777,0.631325567659422,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,3.54264355151045,1.8839847340965,10.3653617694312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@Folh1 | |||
}} |
Revision as of 14:25, 14 September 2013
Short description: | p5@Folh1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Folh1_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | -89bp_to_ENSMUST00000001824, NM_001159706, NM_016770, uc009ifh.2, uc012fop.1_5end |
EntrezGene: | Folh1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 1.46e-25 | 14 |
kidney mesenchyme | 1.46e-25 | 14 |
upper urinary tract | 1.46e-25 | 14 |
kidney rudiment | 1.46e-25 | 14 |
kidney field | 1.46e-25 | 14 |
urinary system structure | 4.16e-20 | 18 |
renal system | 4.22e-19 | 19 |
cavitated compound organ | 2.25e-17 | 21 |
compound organ | 6.31e-09 | 43 |
epididymis | 1.59e-08 | 3 |
excretory tube | 1.59e-08 | 3 |
mesonephric epithelium | 1.59e-08 | 3 |
mesonephric tubule | 1.59e-08 | 3 |
nephric duct | 1.59e-08 | 3 |
kidney epithelium | 1.59e-08 | 3 |
renal duct | 1.59e-08 | 3 |
mesonephric duct | 1.59e-08 | 3 |
pronephric duct | 1.59e-08 | 3 |
abdomen element | 6.29e-08 | 49 |
abdominal segment element | 6.29e-08 | 49 |
abdominal segment of trunk | 6.29e-08 | 49 |
abdomen | 6.29e-08 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.