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FFCP PHASE1:Mm9::chr9:66440800..66440831,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=235441|HGNC=|MCL_coexpression_id=3721|UniProt=D6RG67,G3UZF0|association_with_transcript=0bp_to_ENSMUST00000139547,ENSMUST00000174387_5end|description=CAGE_peak_1_at_Usp3_5end|id=chr9:66440800..66440831,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!3.33e-10!128;UBERON:0001555!3.33e-10!128;UBERON:0007026!3.33e-10!128;UBERON:0004921!1.19e-09!126;UBERON:0004185!1.19e-09!126;UBERON:0004119!1.40e-09!130;UBERON:0000925!1.40e-09!130;UBERON:0006595!1.40e-09!130;UBERON:0000160!8.04e-09!43;UBERON:0005409!5.31e-08!59;UBERON:0006562!1.35e-07!24;UBERON:0001557!1.35e-07!24;UBERON:0001042!1.35e-07!24;UBERON:0008814!1.35e-07!24;UBERON:0009145!1.35e-07!24;UBERON:0003408!1.58e-07!24;UBERON:0002370!1.73e-07!23;UBERON:0000974!1.73e-07!23;UBERON:0004807!1.73e-07!23;UBERON:0005058!1.73e-07!23;UBERON:0003351!1.73e-07!23;UBERON:0009113!1.73e-07!23;UBERON:0003295!1.73e-07!23;UBERON:0009722!1.73e-07!23;UBERON:0005562!1.73e-07!23;UBERON:0007690!1.73e-07!23;UBERON:0000344!2.92e-07!15;UBERON:0001242!9.89e-07!13;UBERON:0000060!9.89e-07!13;UBERON:0001262!9.89e-07!13;UBERON:0004786!9.89e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.78e-11,31;UBERON:0001007,1.95e-10,116;UBERON:0001555,1.95e-10,116;UBERON:0007026,1.95e-10,116;UBERON:0004921,7.08e-10,114;UBERON:0004119,9.02e-10,118;UBERON:0000925,9.02e-10,118;UBERON:0006595,9.02e-10,118;UBERON:0005409,4.94e-09,47;UBERON:0006562,1.35e-07,24;UBERON:0001557,1.35e-07,24;UBERON:0001042,1.35e-07,24;UBERON:0008814,1.35e-07,24;UBERON:0009145,1.35e-07,24;UBERON:0003408,1.58e-07,24;UBERON:0002370,1.73e-07,23;UBERON:0000974,1.73e-07,23;UBERON:0004807,1.73e-07,23;UBERON:0005058,1.73e-07,23;UBERON:0003351,1.73e-07,23;UBERON:0009113,1.73e-07,23;UBERON:0003295,1.73e-07,23;UBERON:0009722,1.73e-07,23;UBERON:0005562,1.73e-07,23;UBERON:0007690,1.73e-07,23;UBERON:0000344,2.92e-07,15;UBERON:0001242,9.89e-07,13;UBERON:0001262,9.89e-07,13;UBERON:0004786,9.89e-07,13|phase1_expression=11.2104192973356,29.3139342417063,30.0299497997094,48.6967380203996,43.0770327753859,25.0140115148716,21.9595882159794,57.2016322846183,19.9919985455367,18.7251621057595,8.38968044304974,7.97721589953364,47.7650036508064,47.9938009280296,8.32774404539157,11.5410902412201,13.9912375625629,29.8111746263535,30.8507475612912,28.00971701867,12.0761472014519,18.170244069762,14.1047886135025,23.6788785734242,20.8762445771125,24.6919744569459,24.5534337810673,23.7018355954478,32.8740515659527,28.4794046628722,13.7472916606289,15.2407361630311,16.6067492647834,15.8481681015439,40.4392267651784,23.6053196409059,28.9920485892564,32.6454671974788,27.346737058333,27.2232346866375,40.58797267414,31.4200923080885,24.7610280045888,7.1761186246079,8.00877756634165,8.25960384727567,7.04152209913235,5.23260375313072,4.61340983742391,5.44403717407994,10.2190087786515,2.87505128729943,22.8184344238521,47.8739013727487,45.0365690850902,7.97504251711436,14.8997388768154,13.4074743992135,22.8617600771345,18.5146842745212,19.6487735086916,3.72728985276045,12.450127145556,5.39939830368839,7.9109309005358,7.8152812644071,5.09320187881288,3.07374644257244,40.4389488003063,50.2222090593889,40.172067618114,7.9982275633065,6.18431914664518,37.1147121621311,42.2678527190422,40.4456266108409,2.20231761998777,5.74593021383345,3.37934373163736,18.8597391454177,16.4677758484337,21.3574481928272,8.09630697104005,4.50210088025344,4.73674568108111,8.83885756421003,7.11858403995515,16.4031512326265,7.04253597998612,8.01058537131927,33.9141451780963,10.3250865237766,13.599426674155,12.9528765993076,18.1937396885347,18.8171292580881,9.97155382935438,8.01022516116871,4.67614808285164,6.71345191569646,8.59144860637751,14.115912515575,25.4805239706646,42.6640021891999,9.09262372247099,12.6679932737549,9.60496445528088,19.1828917928021,25.3759125974228,10.8362761517322,6.93941307064543,9.13396434936424,8.53277339847416,10.0984169170257,10.9357497636205,10.9329934456818,13.5957232253906,10.9895511259133,18.5768215909474,7.76480879747564,11.2629174414801,12.6067565815158,14.9113408974498,27.2286141220739,25.9713916448684,26.5675337416935,25.7602517687729,13.197860081855,18.1710424714483,4.6435098215495,12.3525162761029,21.2355855070741,5.9100268865374,7.41574826257959,4.98691306942944,10.5456820994042,14.0538322113436,14.1823946495506,19.459652399393,44.1927897361595,12.4915625244196,9.65588838620586,10.6236656585156,13.1113191517072,14.2196283226275,13.1957131893395,15.8355914505942,15.2634988736019,15.3053274982318,17.5868654556072,13.3722854364601,12.2749610159442,12.5121262151519,16.3678518265418,13.9931852757402,14.927570011387,18.9597560574573,11.0659600059328,15.0606654679664,8.28503090142008,10.3191466391682,12.064158117888,12.7842157216014,12.199382368339,8.4846912088058,10.2314935690179,7.51165523918934,15.0627291653649,7.07607354627966,9.85004784474571,10.4578764314154,10.6725990820493,6.58650345873152,9.79706856950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|EntrezGene=235441
|HGNC=
|MCL_coexpression_id=3721
|UniProt=D6RG67,G3UZF0
|association_with_transcript=0bp_to_ENSMUST00000139547,ENSMUST00000174387_5end
|description=CAGE_peak_1_at_Usp3_5end
|id=chr9:66440800..66440831,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001007!3.33e-10!128;UBERON:0001555!3.33e-10!128;UBERON:0007026!3.33e-10!128;UBERON:0004921!1.19e-09!126;UBERON:0004185!1.19e-09!126;UBERON:0004119!1.40e-09!130;UBERON:0000925!1.40e-09!130;UBERON:0006595!1.40e-09!130;UBERON:0000160!8.04e-09!43;UBERON:0005409!5.31e-08!59;UBERON:0006562!1.35e-07!24;UBERON:0001557!1.35e-07!24;UBERON:0001042!1.35e-07!24;UBERON:0008814!1.35e-07!24;UBERON:0009145!1.35e-07!24;UBERON:0003408!1.58e-07!24;UBERON:0002370!1.73e-07!23;UBERON:0000974!1.73e-07!23;UBERON:0004807!1.73e-07!23;UBERON:0005058!1.73e-07!23;UBERON:0003351!1.73e-07!23;UBERON:0009113!1.73e-07!23;UBERON:0003295!1.73e-07!23;UBERON:0009722!1.73e-07!23;UBERON:0005562!1.73e-07!23;UBERON:0007690!1.73e-07!23;UBERON:0000344!2.92e-07!15;UBERON:0001242!9.89e-07!13;UBERON:0000060!9.89e-07!13;UBERON:0001262!9.89e-07!13;UBERON:0004786!9.89e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.78e-11,31;UBERON:0001007,1.95e-10,116;UBERON:0001555,1.95e-10,116;UBERON:0007026,1.95e-10,116;UBERON:0004921,7.08e-10,114;UBERON:0004119,9.02e-10,118;UBERON:0000925,9.02e-10,118;UBERON:0006595,9.02e-10,118;UBERON:0005409,4.94e-09,47;UBERON:0006562,1.35e-07,24;UBERON:0001557,1.35e-07,24;UBERON:0001042,1.35e-07,24;UBERON:0008814,1.35e-07,24;UBERON:0009145,1.35e-07,24;UBERON:0003408,1.58e-07,24;UBERON:0002370,1.73e-07,23;UBERON:0000974,1.73e-07,23;UBERON:0004807,1.73e-07,23;UBERON:0005058,1.73e-07,23;UBERON:0003351,1.73e-07,23;UBERON:0009113,1.73e-07,23;UBERON:0003295,1.73e-07,23;UBERON:0009722,1.73e-07,23;UBERON:0005562,1.73e-07,23;UBERON:0007690,1.73e-07,23;UBERON:0000344,2.92e-07,15;UBERON:0001242,9.89e-07,13;UBERON:0001262,9.89e-07,13;UBERON:0004786,9.89e-07,13
|phase1_expression=11.2104192973356,29.3139342417063,30.0299497997094,48.6967380203996,43.0770327753859,25.0140115148716,21.9595882159794,57.2016322846183,19.9919985455367,18.7251621057595,8.38968044304974,7.97721589953364,47.7650036508064,47.9938009280296,8.32774404539157,11.5410902412201,13.9912375625629,29.8111746263535,30.8507475612912,28.00971701867,12.0761472014519,18.170244069762,14.1047886135025,23.6788785734242,20.8762445771125,24.6919744569459,24.5534337810673,23.7018355954478,32.8740515659527,28.4794046628722,13.7472916606289,15.2407361630311,16.6067492647834,15.8481681015439,40.4392267651784,23.6053196409059,28.9920485892564,32.6454671974788,27.346737058333,27.2232346866375,40.58797267414,31.4200923080885,24.7610280045888,7.1761186246079,8.00877756634165,8.25960384727567,7.04152209913235,5.23260375313072,4.61340983742391,5.44403717407994,10.2190087786515,2.87505128729943,22.8184344238521,47.8739013727487,45.0365690850902,7.97504251711436,14.8997388768154,13.4074743992135,22.8617600771345,18.5146842745212,19.6487735086916,3.72728985276045,12.450127145556,5.39939830368839,7.9109309005358,7.8152812644071,5.09320187881288,3.07374644257244,40.4389488003063,50.2222090593889,40.172067618114,7.9982275633065,6.18431914664518,37.1147121621311,42.2678527190422,40.4456266108409,2.20231761998777,5.74593021383345,3.37934373163736,18.8597391454177,16.4677758484337,21.3574481928272,8.09630697104005,4.50210088025344,4.73674568108111,8.83885756421003,7.11858403995515,16.4031512326265,7.04253597998612,8.01058537131927,33.9141451780963,10.3250865237766,13.599426674155,12.9528765993076,18.1937396885347,18.8171292580881,9.97155382935438,8.01022516116871,4.67614808285164,6.71345191569646,8.59144860637751,14.115912515575,25.4805239706646,42.6640021891999,9.09262372247099,12.6679932737549,9.60496445528088,19.1828917928021,25.3759125974228,10.8362761517322,6.93941307064543,9.13396434936424,8.53277339847416,10.0984169170257,10.9357497636205,10.9329934456818,13.5957232253906,10.9895511259133,18.5768215909474,7.76480879747564,11.2629174414801,12.6067565815158,14.9113408974498,27.2286141220739,25.9713916448684,26.5675337416935,25.7602517687729,13.197860081855,18.1710424714483,4.6435098215495,12.3525162761029,21.2355855070741,5.9100268865374,7.41574826257959,4.98691306942944,10.5456820994042,14.0538322113436,14.1823946495506,19.459652399393,44.1927897361595,12.4915625244196,9.65588838620586,10.6236656585156,13.1113191517072,14.2196283226275,13.1957131893395,15.8355914505942,15.2634988736019,15.3053274982318,17.5868654556072,13.3722854364601,12.2749610159442,12.5121262151519,16.3678518265418,13.9931852757402,14.927570011387,18.9597560574573,11.0659600059328,15.0606654679664,8.28503090142008,10.3191466391682,12.064158117888,12.7842157216014,12.199382368339,8.4846912088058,10.2314935690179,7.51165523918934,15.0627291653649,7.07607354627966,9.85004784474571,10.4578764314154,10.6725990820493,6.58650345873152,9.79706856950714,6.30869845692382,23.873870071994,41.9631854389423,25.1228038330367,15.3567540385368,15.5598570146494,16.8816374331942,18.3532007407242,15.5664630691409,17.5007576023554,23.2519240156811,19.1050787479853,23.8768448360256,32.0319919986253,19.496408711912,29.6610404855893,29.8270508827078,35.248005366023,13.6560888686219,10.5108631600951,22.5415471346161,13.8482902934814,11.8311017172252,14.1674356178443,12.7105439619757,13.727743762103,8.79192875911699,13.6970851953199,11.2651998293117,8.3422552858047,8.45203678986773,8.09503604585473,8.72298521970563,9.64708639009667,7.89340140522401,9.78166867332756,19.2940919862292,6.04035109013779,5.75072826109418,14.5134969590716,12.1694692514679,13.1341016532498,12.3784215330119,14.473305640901,15.888774354328,9.28507917675375,14.0149879740142,11.5426658327128,13.1426539041561,19.2632196058088,17.615229425565,13.4642217021881,13.8718926813448,21.9250042752287,15.4671125597762,12.2897486036803,11.9152637487468,13.5970115066621,21.1107797514981,14.6854534631052,10.3270497333998,18.4877620024171,6.26147300952389,5.62616095642575,12.4590558486273,11.8661335786055,15.1443945319803,13.2749173060857,13.3562506594335,15.7719406648684,10.9171350300373,20.3815102167959,10.5250782435473,11.1057226006299,17.7879500075936,17.0300297703558,25.2653351670718,9.25941139069727,14.3340524231147,19.4664745107592,13.2745138339963,12.624593080059,10.883648050731,12.8251454234011,11.2214719294694,14.7568871013085,13.9551278310839,18.9037539328303,19.250858432775,15.8018378967908,12.6502330289999,15.470331487228,14.2984634416591,13.324520958317,11.2542054890996,13.5032332069903,11.5271151867478,14.9829806785739,10.86023535974,12.7875278628132,10.560226862867,8.47328283455281,15.4369878638473,28.1955492529931,25.9957726980408,18.2145033283031,23.5163517686179,19.8610488691524,27.1077178065761,6.67531087237835,14.8657666294132,11.9704383418669,11.6672552242918,10.360265135258,15.4464477324758,11.6676868335327,18.5276488693302,21.692475110167,17.274996725553,19.0934123603023,15.6586316822662,13.2157653632452,13.5006676027252,12.1271211688392,14.4119292072477,19.0158728402597,20.3327501084326,14.1348208671376,30.3299037502795,16.1548221402601,5.07323644815771,12.4098733216502,10.7548018797113,10.3059129822345,9.04118764344118,7.94093789806657,14.6696548307192,11.7183946359555,15.7289016638566,6.52277126230216,6.62469014393091,37.6053233547532,13.582589424441,14.276823045911,21.4369357913362,24.3476306107775,31.7890167650024,33.2941395170314,36.7746922664697,41.1943115788442,41.9137436602499,38.1122979817257,49.7035191772737,39.6392787558157,57.1528051667872,18.1384306892169,17.9808622232992,13.2776507782024,12.4234616109418,21.2508553435409,8.63339387075437,19.2309205480628,31.7265201037017,25.5801773058035,6.7770221114048,8.28585425712918,5.15605962095457,4.64003592327956,7.53590771747707,3.0215755895588,5.40018000185445,7.65546045481175,6.34399372577886,3.62432218226274,18.5779352175676,17.1580695562443,12.8050204315601,11.6691224192781,10.0614318061432,14.8913241844511,11.3345831178824,10.9198580336614,14.4413644316317,10.3605856823157,11.9135270948413,14.7128546281139,11.143339388916,13.701382614642,13.2675933287467,14.2888107384922,13.2108131577135,13.3107362119956,13.1867488257058,12.6591071315582,14.7433778525729,12.0683548188349,12.3986818772607,11.6277133305863,14.2105164427149,13.9614103021266,11.8903182367302,11.5750673032651,12.765586701511,9.53941861818155,11.7448667942932,13.0025916735744,10.2307760792422,14.8739367538527,14.8538090455479,16.2376875659665,11.9305120307158,21.2722343507815,16.8333732220582,9.9266138603782,6.26043156175138
|short_description=p1@Usp3
}}

Revision as of 18:34, 14 September 2013

Short description:p1@Usp3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Usp3_5end
Coexpression cluster:MCL_coexpression_mm9:3721
Association with transcript: 0bp_to_ENSMUST00000139547, ENSMUST00000174387_5end
EntrezGene:Usp3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Usp3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I529.31
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I630.03
CD326+ enterocyte, pool1.CNhs13542.11848-124I348.70
CD326+ enterocyte, pool2.CNhs13197.11849-124I443.08
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I725.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I821.96
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E957.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E719.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F218.73
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.39
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F17.98
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E447.77
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E847.99
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A18.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A311.54
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A513.99
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A229.81
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A430.85
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A628.01
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.08
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H218.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I914.10
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D123.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D220.88
GP2+ M cell, pool1.CNhs13228.11845-124H924.69
GP2+ M cell, pool2.CNhs13231.11846-124I124.55
GP2+ M cell, pool3.CNhs13240.11847-124I223.70
Ileum epithelium, pool1.CNhs13199.10252-104B932.87
Ileum epithelium, pool2.CNhs13232.10253-104C128.48
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C813.75
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I315.24
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G616.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F540.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F623.61
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F728.99
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G832.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H127.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H327.22
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G940.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H231.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H424.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.18
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.26
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.04
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.23
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.61
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.44
Mouse Astrocytes, donor2.CNhs12078.11552-120C410.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A222.82
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I947.87
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A145.04
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.98
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E114.90
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C513.41
Mouse Granule cells, donor1.CNhs12131.11713-123C322.86
Mouse Granule cells, donor2.CNhs12357.11731-123E318.51
Mouse Granule cells, donor3.CNhs12108.11636-122C719.65
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.73
Mouse Meningeal cells, donor3.CNhs12109.11639-122D112.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.82
Mouse Microglia, donor1.CNhs12629.11718-123C85.09
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D540.44
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F550.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D940.17
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.18
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D237.11
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F242.27
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D640.45
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.75
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D418.86
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F416.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D821.36
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.10
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.84
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.12
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E116.40
Mouse Schwann, donor1.CNhs12507.11728-123D97.04
Mouse Schwann, donor2.CNhs12573.11746-123F98.01
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G333.91
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F710.33
Mouse hepatocyte, donor1.CNhs13078.11714-123C413.60
Mouse hepatocyte, donor3.CNhs12615.11637-122C812.95
Mouse hepatocyte, donor6.CNhs13090.11822-124F418.19
Mouse hepatocyte, donor8.CNhs13091.11824-124F618.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A79.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.59
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H114.12
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I825.48
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B642.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G19.09
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G212.67
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.60
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B619.18
accessory axillary lymph node, adult.CNhs10475.1063-29H925.38
adrenal gland, adult.CNhs10508.49-24D710.84
adrenal gland, embryo E14.CNhs11038.406-44C56.94
adrenal gland, embryo E16.CNhs11004.1254-43D69.13
adrenal gland, embryo E17.CNhs11043.1263-45I18.53
adrenal gland, embryo E18.CNhs11026.1262-18F510.10
adrenal gland, neonate N00.CNhs11191.1311-23C110.94
adrenal gland, neonate N25.CNhs11223.1377-27I310.93
amnion, adult pregnant day17.5.CNhs10488.583-22A813.60
aorta, adult.CNhs10498.46-23H110.99
bone (os femoris), adult.CNhs10483.56-12G218.58
bone (os femoris), neonate N02.CNhs11227.1985-43F57.76
bone (os femoris), neonate N16.CNhs11225.1525-43A611.26
bone (os femoris), neonate N20.CNhs11195.1350-25C312.61
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B227.23
cerebellum, neonate N30.CNhs11135.1395-42I225.97
colon, adult.CNhs10468.36-18H726.57
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C725.76
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D113.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D418.17
corpora quadrigemina, adult.CNhs10501.16-22A44.64
corpus striatum, adult.CNhs10487.19-21D812.35
corpus striatum, neonate N00.CNhs11226.630-43F121.24
cortex, adult.CNhs10473.12-14D55.91
cortex, neonate N30.CNhs11107.1392-42F27.42
diencephalon, adult.CNhs10482.20-12F24.99
diencephalon, neonate N30.CNhs11201.1388-42B210.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B114.05
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A214.18
epididymis, adult.CNhs10490.58-23B219.46
eyeball, adult.CNhs10484.31-12G444.19
eyeball, embryo E12.CNhs11016.345-16C612.49
eyeball, embryo E14.CNhs10521.399-16E29.66
eyeball, embryo E15.CNhs10593.426-16C910.62
eyeball, embryo E17.CNhs11023.1261-18D413.11
eyeball, neonate N00.CNhs11207.633-15C614.22
eyeball, neonate N01.CNhs11140.1532-43E713.20
eyeball, neonate N02.CNhs11205.1551-44G815.84
eyeball, neonate N16.CNhs11188.777-19A215.26
forelimb, embryo E11.CNhs10596.335-25E215.31
forelimb, embryo E12.CNhs10600.359-14H217.59
forelimb, embryo E13.CNhs10589.384-1E213.37
forelimb, embryo E14.CNhs10577.413-26A812.27
forelimb, embryo E15.CNhs11007.437-20E712.51
forelimb, embryo E17.CNhs10598.1517-43C416.37
forelimb, embryo E18.CNhs11008.1520-43B513.99
gonad, embryo E13.CNhs11044.1564-45I614.93
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C818.96
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D211.07
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D515.06
heart, embryo E11.CNhs10586.331-24E98.29
heart, embryo E12.CNhs11015.353-12F510.32
heart, embryo E13.CNhs11013.376-3I912.06
heart, embryo E14.CNhs10597.403-26D412.78
heart, embryo E15.CNhs11017.431-16C812.20
heart, embryo E16.CNhs11021.457-17C68.48
heart, embryo E17.CNhs11025.479-18E510.23
heart, embryo E18.CNhs11030.1283-20G37.51
heart, neonate N00.CNhs11213.639-21E315.06
heart, neonate N03.CNhs11221.1349-25I27.08
heart, neonate N10.CNhs11118.749-24G19.85
heart, neonate N16.CNhs11209.782-15G110.46
heart, neonate N20.CNhs11127.821-26I610.67
heart, neonate N25.CNhs11196.1351-25D36.59
heart, neonate N30.CNhs11202.1390-42D29.80
hippocampus, adult.CNhs10478.13-16E86.31
hippocampus, neonate N00.CNhs11228.627-43G123.87
intestinal mucosa, adult.CNhs10506.860-29I341.96
intestine, adult.CNhs10496.178-9A325.12
intestine, embryo E12.CNhs11019.1251-16I515.36
intestine, embryo E13.CNhs11010.381-16D515.56
intestine, embryo E15.CNhs10602.976-16D816.88
intestine, embryo E16.CNhs10585.463-22H418.35
intestine, embryo E17.CNhs10582.482-18D315.57
intestine, embryo E18.CNhs10526.1289-20F717.50
intestine, neonate N00.CNhs11126.644-26D123.25
intestine, neonate N01.CNhs11192.1322-23E919.11
intestine, neonate N06.CNhs11102.688-20B823.88
intestine, neonate N07.CNhs11095.720-20F232.03
intestine, neonate N10.CNhs11098.755-23A519.50
intestine, neonate N20.CNhs11187.827-18D129.66
intestine, neonate N25.CNhs11121.1352-25E329.83
intestine, neonate N30.CNhs11131.1384-42G135.25
kidney, embryo E14.CNhs10606.411-4I913.66
kidney, embryo E15.CNhs10997.434-16F810.51
kidney, embryo E16.CNhs10584.464-22A522.54
kidney, embryo E17.CNhs11028.483-18I213.85
kidney, embryo E18.CNhs11001.1288-20C711.83
kidney, neonate N00.CNhs11214.646-21G714.17
kidney, neonate N10.CNhs11206.758-6D512.71
kidney, neonate N20.CNhs11113.832-19I113.73
kidney, neonate N25.CNhs11122.1353-25F38.79
kidney, neonate N30.CNhs11203.1385-42H113.70
liver, adult pregnant day01.CNhs10466.508-5B211.27
liver, embryo E12.CNhs10601.355-15F88.34
liver, embryo E13.CNhs10524.378-3H68.45
liver, embryo E14.CNhs10594.409-16E18.10
liver, embryo E15.CNhs10520.433-16D78.72
liver, embryo E16.CNhs10523.462-17F59.65
liver, embryo E17.CNhs10510.481-18A37.89
liver, embryo E18.CNhs10579.499-43G49.78
liver, neonate N00.CNhs11117.641-24F419.29
liver, neonate N03.CNhs11123.1345-25G26.04
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H214.51
liver, neonate N10.CNhs11115.751-24B912.17
liver, neonate N20.CNhs11220.823-25A313.13
liver, neonate N25.CNhs11198.1368-26H112.38
liver, neonate N30.CNhs11106.1382-42D114.47
lung, adult.CNhs10474.28-22B115.89
lung, embryo E12.CNhs10522.354-16G29.29
lung, embryo E14.CNhs10604.404-26F814.01
lung, embryo E15.CNhs11020.432-17C511.54
lung, embryo E16.CNhs10998.458-17B613.14
lung, embryo E17.CNhs10605.480-44A619.26
lung, embryo E18.CNhs10583.1287-20I617.62
lung, neonate N00.CNhs11224.640-42C613.46
lung, neonate N06.CNhs11212.683-20E513.87
lung, neonate N07.CNhs11111.715-19A321.93
lung, neonate N10.CNhs11219.750-23E615.47
lung, neonate N20.CNhs11109.822-18A412.29
lung, neonate N25.CNhs11119.1359-25C711.92
lung, neonate N30.CNhs11133.1394-42H213.60
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A121.11
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A114.69
mammary gland, adult lactating day02.CNhs10480.595-22B610.33
mammary gland, adult pregnant day19.CNhs10476.588-5H218.49
medulla oblongata, adult.CNhs10477.17-12C26.26
medulla oblongata, neonate N30.CNhs11200.1396-42A35.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C712.46
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C211.87
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E115.14
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E213.27
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E313.36
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D715.77
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D810.92
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D920.38
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D410.53
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.11
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D617.79
olfactory brain, adult.CNhs10489.18-22I917.03
ovary, adult.CNhs10507.91-2I725.27
ovary, embryo E18.CNhs11040.505-44H79.26
ovary, neonate N00.CNhs11217.1299-22I414.33
oviduct, adult pregnant day01.CNhs10500.988-6G619.47
pancreas, adult.CNhs10486.34-16E413.27
pancreas, embryo E14.CNhs11012.405-44F412.62
pancreas, embryo E15.CNhs11042.1556-45F210.88
pancreas, embryo E16.CNhs11003.460-26E512.83
pancreas, embryo E17.CNhs10599.1558-45G311.22
pancreas, embryo E18.CNhs10580.1535-43I714.76
pancreas, neonate N00.CNhs11105.645-26G913.96
pancreas, neonate N01.CNhs11138.1531-43D718.90
pancreas, neonate N02.CNhs11139.1539-43D819.25
pancreas, neonate N16.CNhs11136.787-43B615.80
pancreas, neonate N25.CNhs11094.1555-45E212.65
pancreas, neonate N30.CNhs11182.1548-44H515.47
pituitary gland, adult.CNhs10493.21-1G814.30
pituitary gland, embryo E12.CNhs11018.346-16E613.32
pituitary gland, embryo E13.CNhs11009.370-44C711.25
pituitary gland, embryo E14.CNhs11037.398-44A513.50
pituitary gland, embryo E15.CNhs10592.427-16B911.53
pituitary gland, embryo E16.CNhs11036.449-43F614.98
pituitary gland, embryo E17.CNhs11039.1265-44F510.86
pituitary gland, neonate N00.CNhs11190.1308-22E912.79
placenta, adult pregnant day10.CNhs10472.539-13I710.56
placenta, adult pregnant day17.CNhs10464.577-18G38.47
prostate, adult.CNhs10470.859-1F815.44
skin, adult.CNhs10492.30-1C328.20
skin, neonate N00.CNhs11124.650-25G426.00
skin, neonate N03.CNhs11215.662-22H318.21
skin, neonate N06.CNhs11097.693-20I523.52
skin, neonate N10.CNhs11108.762-6C419.86
small intestine, neonate N16.CNhs11114.790-21I127.11
spinal cord, adult.CNhs10505.24-13C96.68
spleen, adult.CNhs10465.25-2G214.87
spleen, embryo E16.CNhs11035.461-43C111.97
spleen, embryo E18.CNhs11011.1271-21F211.67
spleen, neonate N10.CNhs11116.752-24D110.36
spleen, neonate N20.CNhs11112.824-19H115.45
spleen, neonate N25.CNhs11099.1354-25G311.67
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C618.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C921.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D317.27
stomach, adult.CNhs10503.33-1H619.09
stomach, embryo E12.CNhs10588.356-43E315.66
stomach, embryo E15.CNhs10603.1252-16G813.22
stomach, embryo E16.CNhs11022.459-17D413.50
stomach, embryo E17.CNhs11006.1035-18D512.13
stomach, embryo E18.CNhs10999.1286-20C614.41
stomach, neonate N03.CNhs11193.1340-24B819.02
stomach, neonate N07.CNhs11210.718-18A920.33
stomach, neonate N25.CNhs11104.1355-25E414.13
stomach, neonate N30.CNhs11134.1386-42I130.33
submandibular gland, adult.CNhs10469.59-29C116.15
testis, adult.CNhs10504.57-7G55.07
testis, embryo E13.CNhs11031.389-23F512.41
testis, embryo E15.CNhs11034.443-27C510.75
testis, embryo E16.CNhs11033.470-26G510.31
testis, embryo E17.CNhs11029.486-18I59.04
testis, embryo E18.CNhs11027.503-18G57.94
testis, neonate N00.CNhs11189.1300-22B714.67
testis, neonate N07.CNhs11222.726-26I411.72
testis, neonate N10.CNhs11204.763-44D915.73
testis, neonate N20.CNhs11110.839-18H36.52
testis, neonate N30.CNhs11130.1391-42E26.62
thymus, adult.CNhs10471.38-12B537.61
thymus, embryo E14.CNhs11041.402-44I413.58
thymus, embryo E15.CNhs11005.430-45I214.28
thymus, embryo E16.CNhs11002.456-26C521.44
thymus, embryo E17.CNhs10581.478-18C124.35
thymus, embryo E18.CNhs10595.1273-19G431.79
thymus, neonate N02.CNhs11181.1541-43F833.29
thymus, neonate N03.CNhs11137.2104-43C736.77
thymus, neonate N06.CNhs11197.681-26C441.19
thymus, neonate N07.CNhs11211.713-19D341.91
thymus, neonate N10.CNhs11194.748-24E438.11
thymus, neonate N20.CNhs11186.820-7A249.70
thymus, neonate N25.CNhs11125.1362-25G739.64
thymus, neonate N30.CNhs11132.1393-42G257.15
tongue, adult.CNhs10499.32-1B418.14
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H317.98
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F713.28
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G512.42
urinary bladder, adult.CNhs10481.879-12E421.25
uterus, adult pregnant day19.CNhs10497.590-15F58.63
uterus, adult.CNhs10509.92-27E519.23
vagina, adult.CNhs10502.89-27D531.73
vesicular gland, adult.CNhs10491.51-27F825.58
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.64
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.34
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I818.58
whole body, embryo E12.CNhs10587.857-27C917.16
whole body, embryo E13.CNhs10512.372-23H212.81
whole body, embryo E14.5.CNhs10578.420-27D211.67
whole body, embryo E14.CNhs10519.395-14B110.06
whole body, embryo E16.CNhs10514.453-14F214.89
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G511.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.92
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G514.44
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.36
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.91
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G514.71
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.14
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G513.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G513.27
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G514.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.21
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G513.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.19
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.66
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.07
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.40
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.63
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G514.21
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.96
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.89
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G512.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.74
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G510.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G514.87
whole body, embryo E17.5.CNhs10513.490-9F914.85
whole body, embryo E17.CNhs10517.475-3I516.24
whole body, embryo E18.CNhs10516.493-3B311.93
whole body, neonate N00.CNhs10525.657-19C221.27
whole body, neonate N01.CNhs10576.659-23C616.83
whole body, neonate N06.CNhs10515.692-21D19.93
whole body, neonate N10.CNhs10518.761-6B46.26





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine7.78e-1131
digestive system1.95e-10116
digestive tract1.95e-10116
primitive gut1.95e-10116
subdivision of digestive tract7.08e-10114
endoderm-derived structure9.02e-10118
endoderm9.02e-10118
presumptive endoderm9.02e-10118
gastrointestinal system4.94e-0947
pharynx1.35e-0724
upper respiratory tract1.35e-0724
chordate pharynx1.35e-0724
pharyngeal arch system1.35e-0724
pharyngeal region of foregut1.35e-0724
gland of gut1.58e-0724
thymus1.73e-0723
neck1.73e-0723
respiratory system epithelium1.73e-0723
hemolymphoid system gland1.73e-0723
pharyngeal epithelium1.73e-0723
thymic region1.73e-0723
pharyngeal gland1.73e-0723
entire pharyngeal arch endoderm1.73e-0723
thymus primordium1.73e-0723
early pharyngeal endoderm1.73e-0723
mucosa2.92e-0715
intestinal mucosa9.89e-0713
wall of intestine9.89e-0713
gastrointestinal system mucosa9.89e-0713







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