FFCP PHASE1:Mm9::chrM:4356..4385,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=89|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrM:4356..4385,-|id=chrM:4356..4385,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!8.90e-10!114;UBERON:0004111!2.89e-09!122;UBERON:0003103!8.51e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0000025,6.82e-12,114;UBERON:0004111,2.58e-11,122;UBERON:0010314,2.90e-10,92;UBERON:0003914,7.12e-08,47;UBERON:0007100,1.38e-07,18;UBERON:0000948,1.38e-07,18;UBERON:0005498,1.38e-07,18;UBERON:0004140,1.38e-07,18;UBERON:0009881,1.38e-07,18;UBERON:0004141,1.38e-07,18;UBERON:0003084,1.38e-07,18;UBERON:0007005,1.38e-07,18;UBERON:0004139,1.38e-07,18;UBERON:0004291,1.38e-07,18;UBERON:0003103,1.41e-07,43|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0.171217968225505,0.0797721589953364,0.171200729931206,0.0874204024189974,0.333109761815663,0,0,0.157731082679119,0.411343300817216,0.84877930359606,1.36069264241712,0.198581902401771,0.261199789138935,0.159992422793407,0.68822784320151,0.57423196411502,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0.523523743973798,0,0,0.485510353031154,0.125896817975577,0,0,0,0,0,0.194429899074283,0,1.43752564364972,0.503347818173209,0,0.672187598284928,1.02903774414379,0,1.03134418455488,0,0.528990979272033,0.633831403506179,0,0,0.449949858640699,0.988866362566974,0,0.299600110518405,0.384218305321555,0.311068836925433,0.405017814995072,0.841299845405528,0.856952953211411,1.10434270475807,0.122490799214954,0.479227355091182,0,2.20231761998777,2.042997409363,3.5329502648936,0,0.731901148819277,0,1.67509799400829,5.6276261003168,6.72312290217964,2.65165726926301,1.56608848879013,0.745597783301202,0.454357159999104,0.226714680320357,0,1.72084775396277,0.679971333707751,15.6513925574967,4.54843492213368,0.896053774194671,1.54488862144927,0,1.03914401841148,0.35333957451034,0.14084341977668,0,0,0,0.216491041011214,0,0.505524445014783,3.31133251185274,0.258937883647172,0.890652834388949,1.90833859442749,2.13125834818499,2.99800146432876,2.56228488939458,3.64524992120685,3.51866455723091,1.73036477414062,3.7595832799177,0,2.10296904931632,3.75430581382669,5.81850303762267,0,3.22058876712702,1.67557365450764,3.0654846625031,0.11981512450592,0,0.254140454146129,2.09706895166752,2.74500361691176,1.50785222535437,2.08589184230732,2.04572365864264,2.0778804455956,2.10913641988085,1.52759045775474,0.746441823660558,1.0108910337347,4.41927897361595,0.520481771850815,0.229902104433473,0.900310649026746,1.35634336052144,1.49680298132921,0.896796041993948,0.843315521037559,1.03481348295606,0.862271971731369,0.756424320671277,0.351902248327898,0.657587197282725,2.50242524303038,0.348252166522167,0.61734640922383,0.59710280045548,0,0,0.284163499395593,0.414251545071004,1.87620847984877,1.44049649168812,2.84093682702252,2.16440654922144,3.70241070929708,4.88321283975857,3.21928081679543,8.17357396570186,4.44311594766397,13.4617320544858,8.59329381186071,14.3275987676826,14.4903076092093,9.79706856950714,1.89260953707715,2.26390147234426,1.98251269790279,2.64450566663544,0.426576501070468,1.39342003116263,0.38660238396628,1.00841762311671,1.11189021922435,0.570676878337677,1.42358718463353,2.14108641141214,2.26201687920243,1.79060824837036,1.16978452271472,4.49409704327111,1.94524244887225,0.995706366271836,0.569003702859245,1.71372768914593,0,1.01825663922657,2.13347735884388,3.15611189506434,3.16182685621286,6.9376769550413,13.1878931386755,3.08492909804501,6.22550516883013,0.500535317148282,0.196558995113203,0.674586337154561,0.202860121388503,0.241177159752417,0.25462585178142,0.575392274901621,7.29608520487659,5.21666685057355,87.6986059816863,8.93138274404408,11.2333562321242,7.32478746046624,5.56131981917928,9.64887042726734,1.84753190166605,0,0.488894929326078,0.509235257325564,1.40814148973101,0,0.238043640886014,2.34160377429359,0.945810864637146,3.10050565508285,0.956728611944923,1.63863314715738,3.10832967358612,1.01254341007058,1.50791283939272,0,0.491764273019036,1.37968373152366,3.21101179975584,1.99259867206745,1.80328439914343,4.03953483526997,0.315508219416257,0.780877488593277,0.861693590931196,0.477937595905104,0.668396022247182,0.283076530788832,0.809621403349789,1.75353514746787,0.395287777946524,4.81981974632711,0.99358059645788,0.35613120733451,0.488660878060728,0.824850614862677,1.32745138339963,0.728341908464944,0.906970670894253,0.565815239267694,0.885905678642318,0.307435147943927,0.775284879504663,0,0,0.948110273807448,4.21674434299995,1.03135543248187,1.02131881726136,1.26042765821917,1.29358683782755,1.07168517515796,0.709360934569094,1.24858172321449,0.658196082408484,3.65357938937519,1.64270195644597,0.21183207086382,0.441056796109924,0.65954501176592,0.322928853391811,1.14594557363496,0.477489376012546,1.31312719796049,5.53813589596716,1.8542530201051,0.512612642393558,0,1.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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=89 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chrM:4356..4385,- | |||
|id=chrM:4356..4385,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!8.90e-10!114;UBERON:0004111!2.89e-09!122;UBERON:0003103!8.51e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,6.82e-12,114;UBERON:0004111,2.58e-11,122;UBERON:0010314,2.90e-10,92;UBERON:0003914,7.12e-08,47;UBERON:0007100,1.38e-07,18;UBERON:0000948,1.38e-07,18;UBERON:0005498,1.38e-07,18;UBERON:0004140,1.38e-07,18;UBERON:0009881,1.38e-07,18;UBERON:0004141,1.38e-07,18;UBERON:0003084,1.38e-07,18;UBERON:0007005,1.38e-07,18;UBERON:0004139,1.38e-07,18;UBERON:0004291,1.38e-07,18;UBERON:0003103,1.41e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0.171217968225505,0.0797721589953364,0.171200729931206,0.0874204024189974,0.333109761815663,0,0,0.157731082679119,0.411343300817216,0.84877930359606,1.36069264241712,0.198581902401771,0.261199789138935,0.159992422793407,0.68822784320151,0.57423196411502,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0.523523743973798,0,0,0.485510353031154,0.125896817975577,0,0,0,0,0,0.194429899074283,0,1.43752564364972,0.503347818173209,0,0.672187598284928,1.02903774414379,0,1.03134418455488,0,0.528990979272033,0.633831403506179,0,0,0.449949858640699,0.988866362566974,0,0.299600110518405,0.384218305321555,0.311068836925433,0.405017814995072,0.841299845405528,0.856952953211411,1.10434270475807,0.122490799214954,0.479227355091182,0,2.20231761998777,2.042997409363,3.5329502648936,0,0.731901148819277,0,1.67509799400829,5.6276261003168,6.72312290217964,2.65165726926301,1.56608848879013,0.745597783301202,0.454357159999104,0.226714680320357,0,1.72084775396277,0.679971333707751,15.6513925574967,4.54843492213368,0.896053774194671,1.54488862144927,0,1.03914401841148,0.35333957451034,0.14084341977668,0,0,0,0.216491041011214,0,0.505524445014783,3.31133251185274,0.258937883647172,0.890652834388949,1.90833859442749,2.13125834818499,2.99800146432876,2.56228488939458,3.64524992120685,3.51866455723091,1.73036477414062,3.7595832799177,0,2.10296904931632,3.75430581382669,5.81850303762267,0,3.22058876712702,1.67557365450764,3.0654846625031,0.11981512450592,0,0.254140454146129,2.09706895166752,2.74500361691176,1.50785222535437,2.08589184230732,2.04572365864264,2.0778804455956,2.10913641988085,1.52759045775474,0.746441823660558,1.0108910337347,4.41927897361595,0.520481771850815,0.229902104433473,0.900310649026746,1.35634336052144,1.49680298132921,0.896796041993948,0.843315521037559,1.03481348295606,0.862271971731369,0.756424320671277,0.351902248327898,0.657587197282725,2.50242524303038,0.348252166522167,0.61734640922383,0.59710280045548,0,0,0.284163499395593,0.414251545071004,1.87620847984877,1.44049649168812,2.84093682702252,2.16440654922144,3.70241070929708,4.88321283975857,3.21928081679543,8.17357396570186,4.44311594766397,13.4617320544858,8.59329381186071,14.3275987676826,14.4903076092093,9.79706856950714,1.89260953707715,2.26390147234426,1.98251269790279,2.64450566663544,0.426576501070468,1.39342003116263,0.38660238396628,1.00841762311671,1.11189021922435,0.570676878337677,1.42358718463353,2.14108641141214,2.26201687920243,1.79060824837036,1.16978452271472,4.49409704327111,1.94524244887225,0.995706366271836,0.569003702859245,1.71372768914593,0,1.01825663922657,2.13347735884388,3.15611189506434,3.16182685621286,6.9376769550413,13.1878931386755,3.08492909804501,6.22550516883013,0.500535317148282,0.196558995113203,0.674586337154561,0.202860121388503,0.241177159752417,0.25462585178142,0.575392274901621,7.29608520487659,5.21666685057355,87.6986059816863,8.93138274404408,11.2333562321242,7.32478746046624,5.56131981917928,9.64887042726734,1.84753190166605,0,0.488894929326078,0.509235257325564,1.40814148973101,0,0.238043640886014,2.34160377429359,0.945810864637146,3.10050565508285,0.956728611944923,1.63863314715738,3.10832967358612,1.01254341007058,1.50791283939272,0,0.491764273019036,1.37968373152366,3.21101179975584,1.99259867206745,1.80328439914343,4.03953483526997,0.315508219416257,0.780877488593277,0.861693590931196,0.477937595905104,0.668396022247182,0.283076530788832,0.809621403349789,1.75353514746787,0.395287777946524,4.81981974632711,0.99358059645788,0.35613120733451,0.488660878060728,0.824850614862677,1.32745138339963,0.728341908464944,0.906970670894253,0.565815239267694,0.885905678642318,0.307435147943927,0.775284879504663,0,0,0.948110273807448,4.21674434299995,1.03135543248187,1.02131881726136,1.26042765821917,1.29358683782755,1.07168517515796,0.709360934569094,1.24858172321449,0.658196082408484,3.65357938937519,1.64270195644597,0.21183207086382,0.441056796109924,0.65954501176592,0.322928853391811,1.14594557363496,0.477489376012546,1.31312719796049,5.53813589596716,1.8542530201051,0.512612642393558,0,1.48155621895769,0.941842285023455,0.820165366326151,1.14389086603261,0.509935289981566,0.279902904647316,0.138199973804424,16.2294005062569,0.790839983952838,0.813277868507395,1.40406943068342,1.46361807210128,0.87345025498471,1.75323650300267,0.991841468704031,2.6175594198403,0.777689839750757,2.4853572523477,0,0.598066184175915,0,0.194451188344048,0.387479470433193,1.18269287843545,1.29092962510329,1.17183946359555,0.629156066554265,2.89900944991207,3.45636007509439,0,1.01362607645082,0.924398614483445,1.29920822977795,0.358053391334963,0.39736270956253,0.360586348559907,0.295379054349154,0.302899349844443,1.143102099825,0.504130925684203,0.38983152295901,1.25075394132428,0.350630706544707,4.98806843953465,0.443971906748129,0.358855426437903,0.335769232728157,0.772758376128762,0.563047426353546,0.36630324853453,0.428736758158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| |||
|short_description=p@chrM:4356..4385,- | |||
}} | |||
Revision as of 19:08, 14 September 2013
| Short description: | p@chrM:4356..4385, - |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chrM:4356..4385, - |
| Coexpression cluster: | MCL_coexpression_mm9:89 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| tube | 6.82e-12 | 114 |
| anatomical conduit | 2.58e-11 | 122 |
| structure with developmental contribution from neural crest | 2.90e-10 | 92 |
| epithelial tube | 7.12e-08 | 47 |
| primary circulatory organ | 1.38e-07 | 18 |
| heart | 1.38e-07 | 18 |
| primitive heart tube | 1.38e-07 | 18 |
| primary heart field | 1.38e-07 | 18 |
| anterior lateral plate mesoderm | 1.38e-07 | 18 |
| heart tube | 1.38e-07 | 18 |
| heart primordium | 1.38e-07 | 18 |
| cardiac mesoderm | 1.38e-07 | 18 |
| cardiogenic plate | 1.38e-07 | 18 |
| heart rudiment | 1.38e-07 | 18 |
| compound organ | 1.41e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
