FFCP PHASE1:Hg19::chr1:2359091..2359102,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C564 | |||
|description=CAGE_peak_at_chr1:2359091..2359102,+ | |||
|id=chr1:2359091..2359102,+ | |||
|ontology_enrichment_celltype=CL:0002159!1.61e-35!13;CL:0002368!1.51e-34!13;CL:0002076!8.56e-31!43;CL:0000244!4.32e-23!4;CL:0000731!4.32e-23!4;CL:0000223!1.59e-21!59;CL:0000066!2.39e-20!254;CL:0002077!1.92e-19!33;CL:0000362!9.39e-19!8;CL:0000068!2.65e-18!3;CL:0000069!2.65e-18!3;CL:0000307!2.65e-18!3;CL:0000377!2.65e-18!3;CL:0002621!2.98e-18!3;CL:0002202!4.04e-16!9;CL:0002632!4.04e-16!9;CL:0000240!4.77e-16!6;CL:0000311!4.77e-16!6;CL:0000079!4.77e-16!6;CL:0000237!4.77e-16!6;CL:0000036!4.77e-16!6;CL:0000357!4.77e-16!6;CL:0000114!4.77e-16!6;CL:0002327!2.33e-13!4;CL:0000575!3.93e-13!2;CL:0000317!4.17e-13!2;CL:1000448!4.17e-13!2;CL:0002308!4.17e-13!2;CL:0002140!4.17e-13!2;CL:0000220!1.39e-11!246;CL:0000312!1.77e-11!5;CL:0002321!1.90e-11!248;CL:0000622!4.36e-11!5;CL:0000154!2.57e-09!6;CL:0002251!2.68e-09!21;CL:0000221!3.62e-09!71;CL:0002328!1.06e-08!3;CL:0002166!1.88e-08!3;CL:0002336!6.49e-07!1;CL:0002261!6.49e-07!1;CL:0002170!6.49e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002159;2.86e-38;14!CL:0000362;7.14e-31;9!CL:0000575;2.95e-23;2!CL:0000317;4.37e-23;2!CL:1000448;4.37e-23;2!CL:0002308;4.37e-23;2!CL:0002140;4.37e-23;2!CL:0002368;2.31e-21;13!CL:0000312;8.06e-21;5!CL:0000240;1.85e-17;6!CL:0000311;1.85e-17;6!CL:0000079;1.85e-17;6!CL:0000237;1.85e-17;6!CL:0000307;9.79e-16;3!CL:0002621;9.79e-16;3!CL:0002076;2.63e-15;42!CL:0002077;6.25e-15;34!CL:0000244;7.11e-12;4!CL:0000731;7.11e-12;4!CL:0002202;9.96e-12;9!CL:0002632;9.96e-12;9!CL:0000622;8.12e-10;5!CL:0000154;2.51e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,2.17e-38,14;CL:0000362,6.12e-31,9;CL:0000575,2.23e-23,2;CL:0000317,2.49e-23,2;CL:1000448,2.49e-23,2;CL:0002308,2.49e-23,2;CL:0002140,2.49e-23,2;CL:0002368,2.22e-21,13;CL:0000312,9.55e-21,5;CL:0000240,2.13e-17,6;CL:0000311,2.13e-17,6;CL:0000079,2.13e-17,6;CL:0000237,2.13e-17,6;CL:0000036,2.13e-17,6;CL:0000357,2.13e-17,6;CL:0000114,2.13e-17,6;CL:0002076,5.70e-16,42;CL:0000068,8.44e-16,3;CL:0000069,8.44e-16,3;CL:0000307,8.44e-16,3;CL:0000377,8.44e-16,3;CL:0002621,1.06e-15,3;CL:0002077,1.73e-15,34;CL:0000066,5.57e-12,253;CL:0000244,6.03e-12,4;CL:0000731,6.03e-12,4;CL:0002202,8.77e-12,9;CL:0002632,8.77e-12,9;CL:0000223,2.52e-11,58;CL:0000622,6.51e-10,5;CL:0000154,2.09e-08,6;CL:0000076,4.64e-08,63;CL:0002321,8.00e-08,250;CL:0000221,9.28e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000357;1.85e-17;6!CL:0000114;1.85e-17;6!CL:0000377;9.79e-16;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!1.61e-18!5;UBERON:0001949!2.98e-18!3;UBERON:0005910!1.82e-15!6;UBERON:0001911!2.33e-13!4;UBERON:0005333!2.33e-13!4;UBERON:0008425!2.33e-13!4;UBERON:0005311!2.33e-13!4;UBERON:0002419!4.17e-13!2;UBERON:0007771!4.17e-13!2;UBERON:0003297!4.17e-13!2;UBERON:0001821!4.17e-13!2;UBERON:0003487!4.17e-13!2;UBERON:0001820!4.17e-13!2;UBERON:0005089!4.17e-13!2;UBERON:0005088!4.17e-13!2;UBERON:0001004!6.69e-11!72;UBERON:0001003!1.30e-10!14;UBERON:0007376!1.30e-10!14;UBERON:0007383!1.30e-10!14;UBERON:0004119!2.27e-10!169;UBERON:0000925!2.27e-10!169;UBERON:0006595!2.27e-10!169;UBERON:0007196!2.78e-10!14;UBERON:0001558!2.78e-10!14;UBERON:0003102!3.74e-09!95;UBERON:0005085!4.60e-09!29;UBERON:0004815!1.06e-08!3;UBERON:0002031!1.06e-08!3;UBERON:0003126!4.02e-08!7;UBERON:0001005!4.02e-08!7;UBERON:0005157!1.18e-07!51;UBERON:0000065!2.32e-07!53;UBERON:0001828!3.86e-07!8;UBERON:0000964!5.62e-07!4;UBERON:0004348!5.62e-07!4;UBERON:0005427!5.62e-07!4;UBERON:0000076!6.49e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;4.37e-23;2!UBERON:0007771;4.37e-23;2!UBERON:0003297;4.37e-23;2!UBERON:0001821;4.37e-23;2!UBERON:0003487;4.37e-23;2!UBERON:0001820;4.37e-23;2!UBERON:0001003;1.54e-18;15!UBERON:0007376;1.54e-18;15!UBERON:0010371;1.24e-16;31!UBERON:0001949;9.79e-16;3!UBERON:0000486;6.59e-15;12!UBERON:0000964;3.97e-12;4!UBERON:0010409;3.97e-12;4!UBERON:0000365;1.11e-09;5!UBERON:0005910;3.25e-08;6!UBERON:0003102;7.00e-08;50!UBERON:0003126;2.95e-07;7!UBERON:0003929;2.95e-07;7!UBERON:0001005;2.95e-07;7!UBERON:0007196;3.05e-07;15!UBERON:0001558;3.05e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,2.49e-23,2;UBERON:0007771,2.49e-23,2;UBERON:0003297,2.49e-23,2;UBERON:0001821,2.49e-23,2;UBERON:0003487,2.49e-23,2;UBERON:0001820,2.49e-23,2;UBERON:0005089,2.49e-23,2;UBERON:0005088,2.49e-23,2;UBERON:0001003,1.40e-18,15;UBERON:0007376,1.40e-18,15;UBERON:0007383,1.40e-18,15;UBERON:0001949,1.06e-15,3;UBERON:0000964,3.45e-12,4;UBERON:0010409,3.45e-12,4;UBERON:0004348,3.45e-12,4;UBERON:0005427,3.45e-12,4;UBERON:0003102,6.97e-10,99;UBERON:0000365,9.70e-10,5;UBERON:0010371,3.03e-09,104;UBERON:0005085,6.95e-09,31;UBERON:0005910,2.91e-08,6;UBERON:0003126,2.77e-07,7;UBERON:0001005,2.77e-07,7;UBERON:0007196,2.83e-07,15;UBERON:0001558,2.83e-07,15;UBERON:0002097,9.84e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71085326900425,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64295288292542,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,1.36373060295417,2.00763216772303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31700342490351,3.37205259772859,3.61904300681871,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839910640994298,0.425325291727159,0.268675568108545,0.871901815541886,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29706215198469,1.95018073810956,0,0,0,0,0,0,0,0,0,0.330569830721956,1.15314040419064,7.01869918720213,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53955380360819,0.670302275535787,2.17781969722645,0,0.43050537267123,1.68471475667626,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.559518030877778,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:2359091..2359102,+ | |||
}} |
Revision as of 15:54, 10 January 2014
Short description: | p@chr1:2359091..2359102, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:2359091..2359102, + |
Coexpression cluster: | C564_Small_salivary_Corneal_Bronchial_Urothelial_Keratinocyte_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin gland | 2.49e-23 | 2 |
epidermis gland | 2.49e-23 | 2 |
gland of integumental system | 2.49e-23 | 2 |
sebaceous gland | 2.49e-23 | 2 |
skin sebaceous gland | 2.49e-23 | 2 |
sweat gland | 2.49e-23 | 2 |
sweat gland placode | 2.49e-23 | 2 |
sebaceous gland placode | 2.49e-23 | 2 |
skin epidermis | 1.40e-18 | 15 |
outer epithelium | 1.40e-18 | 15 |
enveloping layer of ectoderm | 1.40e-18 | 15 |
gingival epithelium | 1.06e-15 | 3 |
cornea | 3.45e-12 | 4 |
eye surface | 3.45e-12 | 4 |
optic eminence | 3.45e-12 | 4 |
corneal primordium | 3.45e-12 | 4 |
surface structure | 6.97e-10 | 99 |
urothelium | 9.70e-10 | 5 |
ecto-epithelium | 3.03e-09 | 104 |
ectodermal placode | 6.95e-09 | 31 |
transitional epithelium | 2.91e-08 | 6 |
trachea | 2.77e-07 | 7 |
respiratory airway | 2.77e-07 | 7 |
tracheobronchial tree | 2.83e-07 | 15 |
lower respiratory tract | 2.83e-07 | 15 |
skin of body | 9.84e-07 | 41 |