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FFCP PHASE1:Hg19::chr1:117008851..117008867,+: Difference between revisions

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{{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1453|description=CAGE_peak_at_chr1:117008851..117008867,+|id=chr1:117008851..117008867,+|ontology_enrichment_celltype=CL:0000181!2.07e-15!12;CL:0000417!2.07e-15!12;CL:0000668!2.07e-15!12;CL:0000414!2.07e-15!12;CL:0000412!2.07e-15!12;CL:0000182!2.07e-15!12;CL:0000167!1.98e-08!1;CL:0000164!1.98e-08!1;CL:0000502!1.98e-08!1;CL:0000172!1.98e-08!1;CL:0000173!1.98e-08!1;CL:0002351!1.98e-08!1;CL:0002563!2.47e-08!4;CL:0002566!3.06e-08!1;CL:0000223!6.29e-07!59;CL:0000148!6.75e-07!10;CL:0000541!6.75e-07!10|ontology_enrichment_celltype_v019=CL:0000182;2.56e-41;12!CL:0002535;1.82e-11;2!CL:0002231;7.26e-08;3|ontology_enrichment_celltype_v019_2=CL:0000182,3.29e-41,12;CL:0000223,1.62e-16,58;CL:0002535,1.82e-11,2;CL:0002231,6.78e-08,3|ontology_enrichment_development_v019=UBERON:0004161;2.58e-64;11!UBERON:0009497;1.83e-54;13!UBERON:0001041;1.09e-23;30!UBERON:0003104;2.76e-22;31!CL:0000223;3.89e-11;58|ontology_enrichment_disease=DOID:4430!1.98e-08!1|ontology_enrichment_disease_v019=DOID:7;2.93e-11;39|ontology_enrichment_disease_v019_2=DOID:7,7.46e-13,39;DOID:305,5.90e-09,106|ontology_enrichment_uberon=UBERON:0002107!1.26e-13!19;UBERON:0006925!1.26e-13!19;UBERON:0008836!1.26e-13!19;UBERON:0002368!2.85e-12!35;UBERON:0003929!6.00e-12!54;UBERON:0008835!1.07e-11!22;UBERON:0003894!1.07e-11!22;UBERON:0009854!3.66e-11!23;UBERON:0007499!3.16e-10!25;UBERON:0009497!3.16e-10!25;UBERON:0000015!3.16e-10!25;UBERON:0002423!3.16e-10!25;UBERON:0006235!3.16e-10!25;UBERON:0004161!3.16e-10!25;UBERON:0005057!8.21e-10!26;UBERON:0009856!8.21e-10!26;UBERON:0000949!2.71e-09!45;UBERON:0002530!1.19e-08!59;UBERON:0001242!2.47e-08!4;UBERON:0001262!2.47e-08!4;UBERON:0004786!2.47e-08!4;UBERON:0004808!2.47e-08!4;UBERON:0001277!2.47e-08!4;UBERON:0002365!3.86e-08!31;UBERON:0002330!3.86e-08!31;UBERON:0002581!4.07e-08!1;UBERON:0005911!2.69e-07!82;UBERON:0003350!7.94e-07!5|ontology_enrichment_uberon_v019=UBERON:0002107;2.47e-37;19!UBERON:0006925;2.47e-37;19!UBERON:0002423;2.08e-28;25!UBERON:0002365;1.41e-21;31!UBERON:0002330;1.41e-21;31!UBERON:0002368;2.62e-20;33!UBERON:0006955;1.82e-11;2!UBERON:0004801;1.82e-11;2!UBERON:0000949;6.11e-11;43!UBERON:0002530;7.43e-10;57!UBERON:0005172;1.03e-08;52!UBERON:0005173;1.03e-08;52!UBERON:0002417;2.36e-07;58!UBERON:0000916;2.36e-07;58|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.99e-37,19;UBERON:0006925,2.99e-37,19;UBERON:0008836,2.99e-37,19;UBERON:0008835,3.41e-32,22;UBERON:0003894,3.41e-32,22;UBERON:0009854,8.43e-31,23;UBERON:0007499,2.40e-28,25;UBERON:0009497,2.40e-28,25;UBERON:0000015,2.40e-28,25;UBERON:0002423,2.40e-28,25;UBERON:0006235,2.40e-28,25;UBERON:0004161,2.40e-28,25;UBERON:0009856,2.92e-27,26;UBERON:0003929,4.46e-23,54;UBERON:0002365,7.04e-23,31;UBERON:0002330,7.04e-23,31;UBERON:0002368,2.85e-20,35;UBERON:0002530,3.34e-16,59;UBERON:0000949,9.04e-16,45;UBERON:0005911,4.15e-15,82;UBERON:0005172,3.88e-13,54;UBERON:0005173,3.88e-13,54;UBERON:0002417,8.11e-12,60;UBERON:0000916,8.11e-12,60;UBERON:0006955,1.82e-11,2;UBERON:0004801,1.82e-11,2;UBERON:0004921,2.67e-10,118;UBERON:0001007,2.58e-08,145;UBERON:0001555,2.58e-08,145;UBERON:0007026,2.58e-08,145;UBERON:0000490,3.39e-08,148;UBERON:0001041,4.10e-08,87;UBERON:0005256,1.06e-07,122;UBERON:0004119,1.70e-07,160;UBERON:0000925,1.70e-07,160;UBERON:0006595,1.70e-07,160;UBERON:0005177,5.76e-07,101|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81264159483652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45031339509947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3369736534424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448788222048861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54435498075768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,6.30265458457789,7.2525955375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{{FFCP
|DHSsupport=supported
|DPIdataset=robust
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|TSSclassifier=not
|UniProt=NA
|association_with_transcript=NA
|coexpression_cluster_id=C1453
|description=CAGE_peak_at_chr1:117008851..117008867,+
|id=chr1:117008851..117008867,+
|ontology_enrichment_celltype=CL:0000181!2.07e-15!12;CL:0000417!2.07e-15!12;CL:0000668!2.07e-15!12;CL:0000414!2.07e-15!12;CL:0000412!2.07e-15!12;CL:0000182!2.07e-15!12;CL:0000167!1.98e-08!1;CL:0000164!1.98e-08!1;CL:0000502!1.98e-08!1;CL:0000172!1.98e-08!1;CL:0000173!1.98e-08!1;CL:0002351!1.98e-08!1;CL:0002563!2.47e-08!4;CL:0002566!3.06e-08!1;CL:0000223!6.29e-07!59;CL:0000148!6.75e-07!10;CL:0000541!6.75e-07!10
|ontology_enrichment_celltype_v019=CL:0000182;2.56e-41;12!CL:0002535;1.82e-11;2!CL:0002231;7.26e-08;3
|ontology_enrichment_celltype_v019_2=CL:0000182,3.29e-41,12;CL:0000223,1.62e-16,58;CL:0002535,1.82e-11,2;CL:0002231,6.78e-08,3
|ontology_enrichment_development_v019=UBERON:0004161;2.58e-64;11!UBERON:0009497;1.83e-54;13!UBERON:0001041;1.09e-23;30!UBERON:0003104;2.76e-22;31!CL:0000223;3.89e-11;58
|ontology_enrichment_disease=DOID:4430!1.98e-08!1
|ontology_enrichment_disease_v019=DOID:7;2.93e-11;39
|ontology_enrichment_disease_v019_2=DOID:7,7.46e-13,39;DOID:305,5.90e-09,106
|ontology_enrichment_uberon=UBERON:0002107!1.26e-13!19;UBERON:0006925!1.26e-13!19;UBERON:0008836!1.26e-13!19;UBERON:0002368!2.85e-12!35;UBERON:0003929!6.00e-12!54;UBERON:0008835!1.07e-11!22;UBERON:0003894!1.07e-11!22;UBERON:0009854!3.66e-11!23;UBERON:0007499!3.16e-10!25;UBERON:0009497!3.16e-10!25;UBERON:0000015!3.16e-10!25;UBERON:0002423!3.16e-10!25;UBERON:0006235!3.16e-10!25;UBERON:0004161!3.16e-10!25;UBERON:0005057!8.21e-10!26;UBERON:0009856!8.21e-10!26;UBERON:0000949!2.71e-09!45;UBERON:0002530!1.19e-08!59;UBERON:0001242!2.47e-08!4;UBERON:0001262!2.47e-08!4;UBERON:0004786!2.47e-08!4;UBERON:0004808!2.47e-08!4;UBERON:0001277!2.47e-08!4;UBERON:0002365!3.86e-08!31;UBERON:0002330!3.86e-08!31;UBERON:0002581!4.07e-08!1;UBERON:0005911!2.69e-07!82;UBERON:0003350!7.94e-07!5
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|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.99e-37,19;UBERON:0006925,2.99e-37,19;UBERON:0008836,2.99e-37,19;UBERON:0008835,3.41e-32,22;UBERON:0003894,3.41e-32,22;UBERON:0009854,8.43e-31,23;UBERON:0007499,2.40e-28,25;UBERON:0009497,2.40e-28,25;UBERON:0000015,2.40e-28,25;UBERON:0002423,2.40e-28,25;UBERON:0006235,2.40e-28,25;UBERON:0004161,2.40e-28,25;UBERON:0009856,2.92e-27,26;UBERON:0003929,4.46e-23,54;UBERON:0002365,7.04e-23,31;UBERON:0002330,7.04e-23,31;UBERON:0002368,2.85e-20,35;UBERON:0002530,3.34e-16,59;UBERON:0000949,9.04e-16,45;UBERON:0005911,4.15e-15,82;UBERON:0005172,3.88e-13,54;UBERON:0005173,3.88e-13,54;UBERON:0002417,8.11e-12,60;UBERON:0000916,8.11e-12,60;UBERON:0006955,1.82e-11,2;UBERON:0004801,1.82e-11,2;UBERON:0004921,2.67e-10,118;UBERON:0001007,2.58e-08,145;UBERON:0001555,2.58e-08,145;UBERON:0007026,2.58e-08,145;UBERON:0000490,3.39e-08,148;UBERON:0001041,4.10e-08,87;UBERON:0005256,1.06e-07,122;UBERON:0004119,1.70e-07,160;UBERON:0000925,1.70e-07,160;UBERON:0006595,1.70e-07,160;UBERON:0005177,5.76e-07,101
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|short_description=p@chr1:117008851..117008867,+
}}

Revision as of 20:21, 10 January 2014

Short description:p@chr1:117008851..117008867, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): No
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr1:117008851..117008867, +
Coexpression cluster:C1453_argyrophil_hepatocellular_Intestinal_small_liver_hepatoblastoma_gastrointestinal
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data