FFCP PHASE1:Hg19::chr1:119921863..119921874,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr1:119921863..119921874,- | |||
|id=chr1:119921863..119921874,- | |||
|ontology_enrichment_celltype=CL:0000181!2.26e-19!12;CL:0000417!2.26e-19!12;CL:0000668!2.26e-19!12;CL:0000414!2.26e-19!12;CL:0000412!2.26e-19!12;CL:0000182!2.26e-19!12;CL:0000223!3.74e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.68e-22;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.48e-22,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.98e-11;11!UBERON:0009497;1.13e-09;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!9.21e-33!19;UBERON:0006925!9.21e-33!19;UBERON:0008836!9.21e-33!19;UBERON:0008835!2.33e-28!22;UBERON:0003894!2.33e-28!22;UBERON:0009854!3.82e-27!23;UBERON:0007499!5.23e-25!25;UBERON:0009497!5.23e-25!25;UBERON:0000015!5.23e-25!25;UBERON:0002423!5.23e-25!25;UBERON:0006235!5.23e-25!25;UBERON:0004161!5.23e-25!25;UBERON:0005057!4.62e-24!26;UBERON:0009856!4.62e-24!26;UBERON:0002365!3.03e-20!31;UBERON:0002330!3.03e-20!31;UBERON:0002368!5.68e-18!35;UBERON:0000949!4.76e-14!45;UBERON:0003929!9.42e-12!54;UBERON:0005172!1.52e-11!55;UBERON:0005173!1.52e-11!55;UBERON:0002530!8.91e-11!59;UBERON:0002417!1.98e-10!61;UBERON:0000916!1.98e-10!61;UBERON:0005911!8.31e-08!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.31e-37;19!UBERON:0006925;2.31e-37;19!UBERON:0002423;1.56e-28;25!UBERON:0002365;4.82e-23;31!UBERON:0002330;4.82e-23;31!UBERON:0002368;6.47e-20;33!UBERON:0000949;1.94e-14;43!UBERON:0005172;2.05e-10;52!UBERON:0005173;2.05e-10;52!UBERON:0002417;4.52e-08;58!UBERON:0000916;4.52e-08;58!UBERON:0002530;1.33e-07;57!UBERON:0001007;1.79e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.40e-37,19;UBERON:0006925,2.40e-37,19;UBERON:0008836,2.40e-37,19;UBERON:0008835,2.47e-32,22;UBERON:0003894,2.47e-32,22;UBERON:0009854,5.93e-31,23;UBERON:0007499,1.60e-28,25;UBERON:0009497,1.60e-28,25;UBERON:0000015,1.60e-28,25;UBERON:0002423,1.60e-28,25;UBERON:0006235,1.60e-28,25;UBERON:0004161,1.60e-28,25;UBERON:0009856,1.91e-27,26;UBERON:0002365,4.21e-23,31;UBERON:0002330,4.21e-23,31;UBERON:0002368,1.62e-20,35;UBERON:0000949,4.68e-16,45;UBERON:0003929,1.91e-13,54;UBERON:0005172,1.91e-13,54;UBERON:0005173,1.91e-13,54;UBERON:0002530,2.45e-12,59;UBERON:0002417,3.89e-12,60;UBERON:0000916,3.89e-12,60;UBERON:0005911,5.80e-09,82;UBERON:0001041,1.84e-08,87;UBERON:0005177,2.54e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33775174109154,1.96565443335525,5.90789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.12164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57746442951761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.10346254298631,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:119921863..119921874,- | |||
}} |
Revision as of 20:25, 10 January 2014
Short description: | p@chr1:119921863..119921874, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:119921863..119921874, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.48e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.40e-37 | 19 |
digestive gland | 2.40e-37 | 19 |
liver bud | 2.40e-37 | 19 |
hepatic diverticulum | 2.47e-32 | 22 |
liver primordium | 2.47e-32 | 22 |
digestive tract diverticulum | 5.93e-31 | 23 |
epithelial sac | 1.60e-28 | 25 |
epithelium of foregut-midgut junction | 1.60e-28 | 25 |
anatomical boundary | 1.60e-28 | 25 |
hepatobiliary system | 1.60e-28 | 25 |
foregut-midgut junction | 1.60e-28 | 25 |
septum transversum | 1.60e-28 | 25 |
sac | 1.91e-27 | 26 |
exocrine gland | 4.21e-23 | 31 |
exocrine system | 4.21e-23 | 31 |
endocrine gland | 1.62e-20 | 35 |
endocrine system | 4.68e-16 | 45 |
gut epithelium | 1.91e-13 | 54 |
abdomen element | 1.91e-13 | 54 |
abdominal segment element | 1.91e-13 | 54 |
gland | 2.45e-12 | 59 |
abdominal segment of trunk | 3.89e-12 | 60 |
abdomen | 3.89e-12 | 60 |
endo-epithelium | 5.80e-09 | 82 |
foregut | 1.84e-08 | 87 |
trunk region element | 2.54e-07 | 101 |