FFCP PHASE1:Hg19::chr1:152087919..152087921,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=7062 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11791 | |||
|TSSclassifier=not | |||
|UniProt=Q5D861 | |||
|association_with_transcript=0bp_to_AY827491_5end | |||
|coexpression_cluster_id=C208 | |||
|description=CAGE_peak_1_at_TCHH_5end | |||
|id=chr1:152087919..152087921,- | |||
|ontology_enrichment_celltype=CL:0000312!3.78e-08!5;CL:0000240!6.29e-07!6;CL:0000311!6.29e-07!6;CL:0000079!6.29e-07!6;CL:0000237!6.29e-07!6;CL:0000036!6.29e-07!6;CL:0000357!6.29e-07!6;CL:0000114!6.29e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0001014;3.89e-11;2!CL:0001016;3.89e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,3.70e-11,2;CL:0001016,3.70e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.30e-21;1!UBERON:0008814;2.02e-11;2!UBERON:0010056;2.02e-11;2 | |||
|ontology_enrichment_disease=DOID:178!2.28e-10!1;DOID:326!2.28e-10!1;DOID:3978!2.28e-10!1;DOID:3394!2.28e-10!1;DOID:5844!2.28e-10!1;DOID:3151!3.61e-10!1;DOID:3149!3.61e-10!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001723!1.51e-13!3;UBERON:0001033!1.51e-13!3;UBERON:0010056!1.51e-13!3;UBERON:0007029!6.73e-11!1;UBERON:0002426!1.08e-10!1;UBERON:0003831!1.08e-10!1;UBERON:0003898!1.08e-10!1;UBERON:0004830!1.08e-10!1;UBERON:0001774!1.08e-10!1;UBERON:0003830!1.08e-10!1;UBERON:0005175!1.08e-10!1;UBERON:0003897!1.08e-10!1;UBERON:0001103!1.08e-10!1;UBERON:0010084!1.08e-10!1;UBERON:0001831!2.74e-10!1;UBERON:0001567!2.74e-10!1;UBERON:0008801!2.74e-10!1;UBERON:0000989!3.01e-10!1;UBERON:0008811!3.01e-10!1;UBERON:0006258!3.01e-10!1;UBERON:0005876!3.01e-10!1;UBERON:0004874!3.01e-10!1;UBERON:0000014!3.97e-10!4;UBERON:0001042!7.43e-09!10;UBERON:0009145!7.43e-09!10;UBERON:0003408!1.33e-08!10;UBERON:0000078!2.16e-08!18;UBERON:0006562!4.29e-08!11;UBERON:0000166!3.27e-07!21;UBERON:0001044!6.48e-07!6;UBERON:0003293!6.48e-07!6;UBERON:0003294!6.48e-07!6;UBERON:0010047!6.48e-07!6;UBERON:0000167!6.48e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;1.39e-27;3!UBERON:0001033;1.39e-27;3!UBERON:0007029;1.53e-21;1!UBERON:0002426;4.22e-21;1!UBERON:0003831;4.22e-21;1!UBERON:0003898;4.22e-21;1!UBERON:0004830;4.22e-21;1!UBERON:0003830;4.22e-21;1!UBERON:0005175;4.22e-21;1!UBERON:0001774;4.22e-21;1!UBERON:0001103;4.22e-21;1!UBERON:0005090;3.02e-11;2!UBERON:0001630;3.02e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.39e-27,3;UBERON:0001033,1.39e-27,3;UBERON:0010056,1.39e-27,3;UBERON:0007029,1.53e-21,1;UBERON:0002426,4.22e-21,1;UBERON:0003831,4.22e-21,1;UBERON:0003898,4.22e-21,1;UBERON:0004830,4.22e-21,1;UBERON:0003830,4.22e-21,1;UBERON:0005175,4.22e-21,1;UBERON:0001774,4.22e-21,1;UBERON:0001103,4.22e-21,1;UBERON:0010084,4.22e-21,1;UBERON:0005090,3.02e-11,2;UBERON:0001630,3.02e-11,2;UBERON:0001042,5.57e-09,10;UBERON:0009145,5.57e-09,10;UBERON:0006562,3.03e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53650399572076,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.11061095820877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21031058919516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12108865325516,0,0,0,0,0,0,1.04314963381548,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,256.941115328285,0,0.994753875806841,0,0.5647304101948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322944549180031,0,0,0,0,30.9157782013685,4.10679961302337,0,0,0,0,0,0,0,21.1176848163109,0,0.813792356631477,0,0.402547587182052,0 | |||
|short_description=p1@TCHH | |||
}} |
Revision as of 20:54, 10 January 2014
Short description: | p1@TCHH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TCHH_5end |
Coexpression cluster: | C208_skin_amniotic_papillotubular_salivary_umbilical_Alveolar_serous |
Association with transcript: | 0bp_to_AY827491_5end |
EntrezGene: | TCHH |
HGNC: | 11791 |
UniProt: | Q5D861 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 3.70e-11 | 2 |
immature CD1a-positive Langerhans cell | 3.70e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
tongue | 1.39e-27 | 3 |
gustatory system | 1.39e-27 | 3 |
future tongue | 1.39e-27 | 3 |
surface | 1.53e-21 | 1 |
chest muscle | 4.22e-21 | 1 |
respiratory system muscle | 4.22e-21 | 1 |
skeletal muscle of trunk | 4.22e-21 | 1 |
respiratory system skeletal muscle | 4.22e-21 | 1 |
thoracic segment muscle | 4.22e-21 | 1 |
chest organ | 4.22e-21 | 1 |
muscle of trunk | 4.22e-21 | 1 |
diaphragm | 4.22e-21 | 1 |
future diaphragm | 4.22e-21 | 1 |
muscle structure | 3.02e-11 | 2 |
muscle organ | 3.02e-11 | 2 |
chordate pharynx | 5.57e-09 | 10 |
pharyngeal region of foregut | 5.57e-09 | 10 |
pharynx | 3.03e-08 | 11 |