FFCP PHASE1:Hg19::chr1:218521292..218521297,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:218521292..218521297,+ | |||
|id=chr1:218521292..218521297,+ | |||
|ontology_enrichment_celltype=CL:0000243!3.58e-10!15;CL:0000125!3.58e-10!15;CL:0000030!3.58e-10!15;CL:0000339!3.58e-10!15;CL:0000095!1.59e-08!17;CL:0000123!1.59e-08!17 | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.18e-20;3!CL:0000067;1.18e-20;3!CL:0005012;1.18e-20;3!CL:0002304;1.18e-20;3!CL:0000322;2.74e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.19e-20,3;CL:0000067,1.19e-20,3;CL:0005012,1.19e-20,3;CL:0002304,1.19e-20,3;CL:0000322,3.54e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;1.73e-13;2!DOID:3908;7.83e-12;5!DOID:3571;1.39e-07;1!DOID:3905;8.87e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,2.54e-13,2;DOID:3908,1.10e-11,5;DOID:3571,2.80e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000073!8.79e-13!94;UBERON:0001016!8.79e-13!94;UBERON:0000924!7.70e-12!173;UBERON:0006601!7.70e-12!173;UBERON:0004121!1.05e-11!169;UBERON:0005743!1.50e-11!86;UBERON:0000955!1.65e-11!69;UBERON:0006238!1.65e-11!69;UBERON:0000033!2.00e-11!123;UBERON:0001017!2.43e-11!82;UBERON:0000153!4.81e-11!129;UBERON:0007811!4.81e-11!129;UBERON:0002346!5.49e-11!90;UBERON:0003075!5.81e-11!86;UBERON:0007284!5.81e-11!86;UBERON:0001049!5.57e-10!57;UBERON:0005068!5.57e-10!57;UBERON:0006241!5.57e-10!57;UBERON:0007135!5.57e-10!57;UBERON:0000477!1.85e-09!286;UBERON:0002616!3.37e-09!59;UBERON:0000119!4.94e-08!312;UBERON:0003056!8.50e-08!61;UBERON:0004111!1.59e-07!241;UBERON:0000483!1.87e-07!309;UBERON:0002780!2.93e-07!41;UBERON:0001890!2.93e-07!41;UBERON:0006240!2.93e-07!41;UBERON:0000481!4.27e-07!347;UBERON:0003080!6.57e-07!42;UBERON:0000025!8.74e-07!194;UBERON:0001893!9.52e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;1.18e-20;3!UBERON:0001775;1.18e-20;3!UBERON:0000488;1.24e-15;4!UBERON:0004903;1.73e-13;2!UBERON:0002173;1.73e-13;2!UBERON:0002186;1.73e-13;2!UBERON:0002203;1.39e-10;6!UBERON:0001768;1.39e-10;6!UBERON:0002200;1.39e-10;6!UBERON:0004821;2.74e-09;3!UBERON:0007499;2.74e-09;3!UBERON:0003215;2.74e-09;3!UBERON:0010368;2.74e-09;3!UBERON:0009911;2.74e-09;3!UBERON:0002299;2.74e-09;3!UBERON:0006524;2.74e-09;3!UBERON:0008874;2.74e-09;3!UBERON:0002169;2.74e-09;3!UBERON:0004894;2.74e-09;3!UBERON:0007029;1.39e-07;1!UBERON:0002134;1.39e-07;1!UBERON:0002426;1.39e-07;1!UBERON:0003831;1.39e-07;1!UBERON:0003898;1.39e-07;1!UBERON:0004830;1.39e-07;1!UBERON:0005208;1.39e-07;1!UBERON:0003830;1.39e-07;1!UBERON:0005175;1.39e-07;1!UBERON:0001774;1.39e-07;1!UBERON:0004145;1.39e-07;1!UBERON:0005946;1.39e-07;1!UBERON:0001103;1.39e-07;1!UBERON:0005965;1.39e-07;1!UBERON:0002078;1.39e-07;1!UBERON:0009856;3.59e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.19e-20,3;UBERON:0001775,1.19e-20,3;UBERON:0000488,1.26e-15,4;UBERON:0004903,2.54e-13,2;UBERON:0002173,2.54e-13,2;UBERON:0002186,2.54e-13,2;UBERON:0002203,1.39e-10,6;UBERON:0001768,1.39e-10,6;UBERON:0002200,1.39e-10,6;UBERON:0004821,3.54e-09,3;UBERON:0003215,3.54e-09,3;UBERON:0010368,3.54e-09,3;UBERON:0009911,3.54e-09,3;UBERON:0002299,3.54e-09,3;UBERON:0006524,3.54e-09,3;UBERON:0008874,3.54e-09,3;UBERON:0002169,3.54e-09,3;UBERON:0004894,3.54e-09,3;UBERON:0007029,6.37e-08,1;UBERON:0002426,7.26e-08,1;UBERON:0003831,7.26e-08,1;UBERON:0003898,7.26e-08,1;UBERON:0004830,7.26e-08,1;UBERON:0003830,7.26e-08,1;UBERON:0005175,7.26e-08,1;UBERON:0001774,7.26e-08,1;UBERON:0001103,7.26e-08,1;UBERON:0010084,7.26e-08,1;UBERON:0002134,1.22e-07,1;UBERON:0005208,1.22e-07,1;UBERON:0005946,1.22e-07,1;UBERON:0005965,1.22e-07,1;UBERON:0002078,1.22e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0.204000691244253,0.626909442956176,0.572471974262113,0.684372125364421,1.38096903554283,0,0,0,0,0,0,0.919421224478927,0,0,0.232401601740905,0,0,1.10799081706375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0,0.361439152384566,0,0.144846518960824,0.795285947051099,0,2.45790524626576,2.66075276955077,3.51339142772504,0.196468613246569,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,1.45650098894541,0,0.354668382198357,0,0,0.24666754841716,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0.125118519871964,0.277064115484183,0.438977620880838,0.30648779579902,0.150238058906597,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0,0.0974370051611986,0,0,0,0.710019185033229,0,0,0,0.545492241181669,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,0,0,0.234817388471643,0,0,1.33177906564219,0,0,0,0,0,0,0.335964256397719,0,0.0895585227028483,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.1466765716419,0.517086863031111,0,0,0.26593811658487,0,0,0,0.266422179016099,0.428933980974443,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.535286966391485,0.315404830067869,0,0.300946099727719,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0.215714200818617,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0.802025881213139,0.184161977871793,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0.541892875087706,1.00337954770971,0,0,0.447749509444357,0.219259876645935,0,0,0.328014645699706,0,0.103041011647722,0,0.577566499444116,0,0,0,0,0,0.15350367472613,0,0,0,0.170453254832202,0.0890320356467374,0,0.192190067365106,0.127612712494584,0,0,0.31481234683064,0.6970372701606,0.308033580176089,0.532306030317022,0,0,0.572499546967965,0.744316738719335,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0.43050537267123,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42068073403207,0,0.296964680832639,0,0,0.844016498463076,0.556543525114529,0,5.48926061132783,0.19924798825107,0.276283915531148,0,0.306806047506464,0,0.622079175323615,0.629078458031288,0.358042349351218,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0.262379999988587,0,0.1137934482855,1.27126825146383,0,1.03423011972439,0.291604613383254,0.173624994933292,0,0.120596438625408,0,0,0,0,0,0,0.307801034015188,0.341826167541004,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.432777279484182,0,0,0,0.296521128680622,0.247127877893006,0.104421949505455,0.134802265961354,1.60515529459758,0.234264445725339,0,0.391329237864179,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0.313932918407225,0,0,0,0,0.293977192243133,0.34823682632161,0,0.51595809741485,0,0.0730893170861856,0,0,0,0.451961481561065,0.137041924646751,0,0.0633107959558787,0,0.480952921509202,0.426905989478705,0.599428828746391,0.144090417154106,1.94712213482057,0.343189995723929,0,1.24252535565433,0.471388069233591,0.815425236441684,1.569042694685,1.52997326454483,0,0,0.136905378891993,0,0.429765441419957,0,0.279282401272254,0.229160424011684,1.43574604915363,0,0,0,0.0671834724867263,1.08089965062721,0,0,0,0,0.196854963029498,0,1.59045937961861,0.272406812223151,0,0.275078873194468,0,0,0,0.0607495566580247,0,0,0,0.105600336519406,0.179287339332845,1.34340638123612,0,0,0,0.542999601753713,0,0,0,0,0.170388021785422,0.339936274560377,0,0,1.42211251997706,0,0.855434189421647,0,0.106787412567695,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,1.14681839138014,0.443716206147409,0.124192805882767,0.276697269872462,0.249960815924213,0.151649117541648,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0.151230923763239,0.15543720058278,0.295710299979268,0.318593534327405,0,0.155262956876259,0,0.265841714557995,1.5652351854352,0.150257608997218,0.380805212168795,0.406870733204662,0,0,0.464033759878494,0.796191777397232,0,0,0.336749488765919,0,0.192619830407303,0,0.260994291965212,0.453411851024545,0,0.244736704506468,0.358177682162975,0,0,0.353378291891762,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0,1.31043939538565,0,0,0,0,0.172214979660816,0,0,0,0,0.511577485214607,0.107824811396682,0,0.109209638192014,0,0,0.123935764259002,0,0.318004350653419,0,0,0,1.2249819094128,0.192687675289379,0,0.638535436228605,0,0,0.138314504928436,0.161475645631851,0,0,0,0.183428598521679,0.693153996902029,0.762764190934334,0,0.198916222116275,0,2.62216589314576,0,0,0.818859587550484,0.443568258651136,0.135075169236789,1.56215619722769,0.413373593002368,0.0634158101939068,0.546974809018219,0,0,0.351742488719241,1.91643641459393,0,0,0.606965604236632,0,0.177404740325278,0,0,0.0679697329768317,0.131545547125698,0.118193840883968,0.556157009460346,0.235479278551542,0,0,0,0.215927591218621,0,0.428859265059938,0.158013611732727,0,0.521574816907738,0,0,0,0,0.860454717640555,0.473328002922261,0.340853619036631,0.423387050190929,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,1.94284397223656,0,0,0,0.90356865631168,0,0,0.0771741581079447,0,0,0.735444965261716,0,0.392616934229891,0.297046400327086,0.8453114551668,0,0.0939839179798536,0,0,0.178553938605658,0,0.160482733378337,0,0.458729283404541,0.286679166302903,0.315543124386369,0.203974470572744,0,1.5870805215462,0,0,0,0,0,0.126698501011437,0,0,0.0918948995348449,0,0,0,0.829169439458779,0.103432995861895,0.213233981900981,0.23806443146374,0,0,0.560659312903067,0,0,0,0,0.134704106029175,0,0.665320713092027,0.814032686109745,0.213454691755431,0,0.269475606319761,0,0.611207220914332,0,0,0,0 | |||
|short_description=p@chr1:218521292..218521297,+ | |||
}} |
Revision as of 00:14, 11 January 2014
Short description: | p@chr1:218521292..218521297, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:218521292..218521297, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.19e-20 | 3 |
ciliated epithelial cell | 1.19e-20 | 3 |
multi-ciliated epithelial cell | 1.19e-20 | 3 |
non-pigmented ciliary epithelial cell | 1.19e-20 | 3 |
pneumocyte | 3.54e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 1.19e-20 | 3 |
ciliary body | 1.19e-20 | 3 |
atypical epithelium | 1.26e-15 | 4 |
bronchoalveolar duct junction | 2.54e-13 | 2 |
alveolar duct | 2.54e-13 | 2 |
bronchiole | 2.54e-13 | 2 |
vasculature of eye | 1.39e-10 | 6 |
uvea | 1.39e-10 | 6 |
vasculature of head | 1.39e-10 | 6 |
pulmonary alveolus epithelium | 3.54e-09 | 3 |
alveolus | 3.54e-09 | 3 |
pulmonary lobule | 3.54e-09 | 3 |
lobule | 3.54e-09 | 3 |
alveolus of lung | 3.54e-09 | 3 |
alveolar system | 3.54e-09 | 3 |
pulmonary acinus | 3.54e-09 | 3 |
alveolar sac | 3.54e-09 | 3 |
alveolar wall | 3.54e-09 | 3 |
surface | 6.37e-08 | 1 |
chest muscle | 7.26e-08 | 1 |
respiratory system muscle | 7.26e-08 | 1 |
skeletal muscle of trunk | 7.26e-08 | 1 |
respiratory system skeletal muscle | 7.26e-08 | 1 |
thoracic segment muscle | 7.26e-08 | 1 |
chest organ | 7.26e-08 | 1 |
muscle of trunk | 7.26e-08 | 1 |
diaphragm | 7.26e-08 | 1 |
future diaphragm | 7.26e-08 | 1 |
tricuspid valve | 1.22e-07 | 1 |
right atrium valve | 1.22e-07 | 1 |
outflow tract of atrium | 1.22e-07 | 1 |
outflow part of right atrium | 1.22e-07 | 1 |
right cardiac atrium | 1.22e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 2.54e-13 | 2 |
non-small cell lung carcinoma | 1.10e-11 | 5 |
liver cancer | 2.80e-07 | 1 |