FFCP PHASE1:Hg19::chr10:4958415..4958431,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=389932 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=33bp_to_NR_026743,uc001ihm.3_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_tAKR_5end | |||
|id=chr10:4958415..4958431,- | |||
|ontology_enrichment_celltype=CL:0000181!5.48e-22!12;CL:0000417!5.48e-22!12;CL:0000668!5.48e-22!12;CL:0000414!5.48e-22!12;CL:0000412!5.48e-22!12;CL:0000182!5.48e-22!12;CL:0002274!6.77e-07!5;CL:0000457!6.77e-07!5;CL:0002191!6.77e-07!5;CL:0000097!6.77e-07!5;CL:0000831!6.77e-07!5;CL:0002028!6.77e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.96e-25;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.81e-25,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.17e-24!19;UBERON:0006925!2.17e-24!19;UBERON:0008836!2.17e-24!19;UBERON:0008835!3.75e-21!22;UBERON:0003894!3.75e-21!22;UBERON:0009854!2.92e-20!23;UBERON:0007499!1.09e-18!25;UBERON:0009497!1.09e-18!25;UBERON:0000015!1.09e-18!25;UBERON:0002423!1.09e-18!25;UBERON:0006235!1.09e-18!25;UBERON:0004161!1.09e-18!25;UBERON:0005057!5.40e-18!26;UBERON:0009856!5.40e-18!26;UBERON:0002365!3.48e-15!31;UBERON:0002330!3.48e-15!31;UBERON:0002368!1.64e-13!35;UBERON:0000949!1.27e-10!45;UBERON:0003929!6.28e-09!54;UBERON:0005172!8.96e-09!55;UBERON:0005173!8.96e-09!55;UBERON:0002530!3.30e-08!59;UBERON:0002417!5.94e-08!61;UBERON:0000916!5.94e-08!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.67e-28;19!UBERON:0006925;2.67e-28;19!UBERON:0002423;1.09e-21;25!UBERON:0002365;3.42e-18;31!UBERON:0002330;3.42e-18;31!UBERON:0002368;1.19e-14;33!UBERON:0000949;2.65e-12;43!UBERON:0005172;4.40e-09;52!UBERON:0005173;4.40e-09;52!UBERON:0002530;7.50e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.49e-28,19;UBERON:0006925,2.49e-28,19;UBERON:0008836,2.49e-28,19;UBERON:0008835,1.43e-24,22;UBERON:0003894,1.43e-24,22;UBERON:0009854,1.55e-23,23;UBERON:0007499,1.03e-21,25;UBERON:0009497,1.03e-21,25;UBERON:0000015,1.03e-21,25;UBERON:0002423,1.03e-21,25;UBERON:0006235,1.03e-21,25;UBERON:0004161,1.03e-21,25;UBERON:0009856,6.62e-21,26;UBERON:0002365,1.20e-17,31;UBERON:0002330,1.20e-17,31;UBERON:0002368,1.05e-15,35;UBERON:0000949,2.36e-12,45;UBERON:0003929,2.17e-10,54;UBERON:0005172,2.17e-10,54;UBERON:0005173,2.17e-10,54;UBERON:0002530,1.49e-09,59;UBERON:0002417,2.10e-09,60;UBERON:0000916,2.10e-09,60;UBERON:0005911,5.19e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,4.91413608338813,8.86184860022106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.04900957073839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.5189024372854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.88795498286987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@tAKR | |||
}} |
Revision as of 01:30, 11 January 2014
Short description: | p2@tAKR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_tAKR_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 33bp_to_NR_026743, uc001ihm.3_5end |
EntrezGene: | tAKR |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.81e-25 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.49e-28 | 19 |
digestive gland | 2.49e-28 | 19 |
liver bud | 2.49e-28 | 19 |
hepatic diverticulum | 1.43e-24 | 22 |
liver primordium | 1.43e-24 | 22 |
digestive tract diverticulum | 1.55e-23 | 23 |
epithelial sac | 1.03e-21 | 25 |
epithelium of foregut-midgut junction | 1.03e-21 | 25 |
anatomical boundary | 1.03e-21 | 25 |
hepatobiliary system | 1.03e-21 | 25 |
foregut-midgut junction | 1.03e-21 | 25 |
septum transversum | 1.03e-21 | 25 |
sac | 6.62e-21 | 26 |
exocrine gland | 1.20e-17 | 31 |
exocrine system | 1.20e-17 | 31 |
endocrine gland | 1.05e-15 | 35 |
endocrine system | 2.36e-12 | 45 |
gut epithelium | 2.17e-10 | 54 |
abdomen element | 2.17e-10 | 54 |
abdominal segment element | 2.17e-10 | 54 |
gland | 1.49e-09 | 59 |
abdominal segment of trunk | 2.10e-09 | 60 |
abdomen | 2.10e-09 | 60 |
endo-epithelium | 5.19e-07 | 82 |