FFCP PHASE1:Hg19::chr10:47083454..47083472,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=5540 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9329 | |||
|TSSclassifier=weak | |||
|UniProt=P50391 | |||
|association_with_transcript=-61bp_to_ENST00000374312,NM_005972,uc001jee.2,uc009xna.2_5end | |||
|description=CAGE_peak_1_at_PPYR1_5end | |||
|id=chr10:47083454..47083472,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.00e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.69e-11;12!CL:0002579;6.74e-10;3!CL:0000064;1.19e-09;3!CL:0000067;1.19e-09;3!CL:0005012;1.19e-09;3!CL:0002304;1.19e-09;3!CL:0002580;1.94e-09;3!CL:0000708;2.64e-09;3!CL:0002549;4.94e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.01e-11,12;CL:0002579,5.31e-10,3;CL:0002580,9.70e-10,3;CL:0000708,1.52e-09,3;CL:0000064,1.66e-09,3;CL:0000067,1.66e-09,3;CL:0005012,1.66e-09,3;CL:0002304,1.66e-09,3;CL:0002549,6.11e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!6.68e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.17e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.07e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000119!1.68e-07!312;UBERON:0000481!3.65e-07!347;UBERON:0002118!3.97e-07!5;UBERON:0004532!3.97e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;1.90e-12;11!UBERON:0000488;2.50e-12;4!UBERON:0002118;3.16e-10;5!UBERON:0000310;1.00e-09;10!UBERON:0001778;1.19e-09;3!UBERON:0001775;1.19e-09;3!UBERON:0006876;2.61e-09;11!UBERON:0003210;2.64e-09;3!UBERON:0001443;8.80e-09;11!UBERON:0003688;1.82e-08;6!UBERON:0002358;1.82e-08;6!UBERON:0003684;1.82e-08;6!UBERON:0001178;1.82e-08;6!UBERON:0004457;3.17e-08;9!UBERON:0000042;3.17e-08;9!UBERON:0002203;3.19e-08;6!UBERON:0001768;3.19e-08;6!UBERON:0002200;3.19e-08;6!UBERON:0000160;1.34e-07;17!UBERON:0005406;1.63e-07;2!UBERON:0001801;3.33e-07;14!UBERON:0005629;4.94e-07;2!UBERON:0005358;4.94e-07;2!UBERON:0001886;4.94e-07;2!UBERON:0004086;4.94e-07;2!UBERON:0005282;4.94e-07;2!UBERON:0005281;4.94e-07;2!UBERON:0000019;9.17e-07;19!UBERON:0000047;9.17e-07;19!UBERON:0004088;9.17e-07;19!UBERON:0010230;9.17e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,2.50e-12,11;UBERON:0000488,2.91e-12,4;UBERON:0002118,2.62e-10,5;UBERON:0000310,8.52e-10,10;UBERON:0003210,1.52e-09,3;UBERON:0001778,1.66e-09,3;UBERON:0001775,1.66e-09,3;UBERON:0006876,3.14e-09,11;UBERON:0001443,7.62e-09,11;UBERON:0003688,1.50e-08,6;UBERON:0002358,1.50e-08,6;UBERON:0003684,1.50e-08,6;UBERON:0001178,1.50e-08,6;UBERON:0002203,3.52e-08,6;UBERON:0001768,3.52e-08,6;UBERON:0002200,3.52e-08,6;UBERON:0000160,1.49e-07,17;UBERON:0005406,1.74e-07,2;UBERON:0001801,3.65e-07,14;UBERON:0005629,6.11e-07,2;UBERON:0005358,6.11e-07,2;UBERON:0001886,6.11e-07,2;UBERON:0004086,6.11e-07,2;UBERON:0005282,6.11e-07,2;UBERON:0005281,6.11e-07,2 | |||
|phase1_expression=1.2717486548939,1.49870366723688,3.66481450649525,0,0.893922188854576,5.23403114460221,0,0,0,0.982935746006035,0,0,0,0,0,0,0,0,0,0.369363174230364,1.42800483870977,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0.50133791063589,0.289693037921647,0,0,1.03988298880475,2.4390233720882,4.56740885604255,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.633152558322899,0,0.573673241497627,0.709336764396714,2.24271040056923,0,0,0,0.134710672069688,0.163461903113459,2.11900398702904,2.30470369792,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,1.77810662500693,0,0.10075209822764,0.169560592310488,0.193260853163297,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3504621473082,5.88034845542168,0,1.96565443335525,0,0,0,2.91665277507493,0,0,0,0,0,0,1.44331342025273,0.231860809950154,14.9109041679494,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79409734952577,3.48768055066624,1.98013371716565,1.03417372606222,0,0,0,0,0,0,0,1.28680194292333,0,1.64648067356154,0,0.710783897485092,0.791951872933429,4.52159065589379,1.74306691720059,3.59902768255405,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,1.03985430765404,0,0.630809660135739,0.937131319941706,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,1.98486246255021,1.84154367945675,5.89386198309454,6.15067916427365,3.07024349440022,1.93024705372329,4.45254199334973,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0.451199612907412,0.385076685522074,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,1.31205858279882,0,0,0,0,0,0,12.8547143875328,0,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0,3.71876439437829,2.51849877464512,0,0,0,0,0,0.572499546967965,0.372158369359667,0,0.38126038784765,0.255897791311334,0,0,1.56989728039846,0.359744915166629,0,0,0,0,0.842516912477962,0.48763373908959,0,0,0.545999645631943,0.424216295861138,0,1.65409603063837,0.66343897524122,0.876901770507525,0,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0.491245205065606,0,0.354761064070598,0,1.31717957183961,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0.593929361665277,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,3.41499734359842,0,0,0.0986434056369336,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.95261931078505,9.46495940185729,5.49927130440263,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39641200636127,0,0,0,0,0,0.201550417460179,0.360299883542404,0,0,0,0,0,0,0,0.408610218334727,0,0.137539436597234,0.415440338029185,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0.39669780522807,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0,1.64180283175561,0.467426619694449,0,0,0,0,0,0,2.64243240990727,0.147855149989634,0.477890301491107,0,5.12367757691656,0,0.53168342911599,0,30.5022946264353,3.04644169735036,2.03435366602331,0.727394636810238,6.01499119437935,7.88857391793439,1.99047944349308,0,0,0.336749488765919,0,0,0.428883182749851,0.260994291965212,0,1.62065732026684,0,0.895444205407437,20.3808955126242,0,0,0,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54403480522735,0,0,0,2.1437183414724,0,0,0.159633859057151,0.205116364240755,0,0.138314504928436,0,0,0,0,0.733714394086716,0.346576998451015,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,2.66876515691748,0,0,0.913158720509496,0,0,0,0,0,0,2.40513409419076,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,4.39892701215285,1.31135736302374,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0.730336388246517,0,0,0,0.0679914901909147,0,2.645134202577,0.743990036333503,0.924351257262837,0.432626562123789,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0.213233981900981,0,0,0.0620747142958579,0,0.0636471582781649,0.404234377916439,0.217716747896961,0,0,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0.805095174364105,0 | |||
|short_description=p1@PPYR1 | |||
}} |
Revision as of 02:43, 11 January 2014
Short description: | p1@PPYR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PPYR1_5end |
Coexpression cluster: | NA |
Association with transcript: | -61bp_to_ENST00000374312, NM_005972, uc001jee.2, uc009xna.2_5end |
EntrezGene: | PPYR1 |
HGNC: | 9329 |
UniProt: | P50391 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.01e-11 | 12 |
omentum preadipocyte | 5.31e-10 | 3 |
preadipocyte of the breast | 9.70e-10 | 3 |
leptomeningeal cell | 1.52e-09 | 3 |
ciliated cell | 1.66e-09 | 3 |
ciliated epithelial cell | 1.66e-09 | 3 |
multi-ciliated epithelial cell | 1.66e-09 | 3 |
non-pigmented ciliary epithelial cell | 1.66e-09 | 3 |
fibroblast of choroid plexus | 6.11e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 2.50e-12 | 11 |
atypical epithelium | 2.91e-12 | 4 |
right ovary | 2.62e-10 | 5 |
breast | 8.52e-10 | 10 |
blood-cerebrospinal fluid barrier | 1.52e-09 | 3 |
ciliary epithelium | 1.66e-09 | 3 |
ciliary body | 1.66e-09 | 3 |
vasculature of organ | 3.14e-09 | 11 |
chest | 7.62e-09 | 11 |
omentum | 1.50e-08 | 6 |
peritoneum | 1.50e-08 | 6 |
abdominal cavity | 1.50e-08 | 6 |
visceral peritoneum | 1.50e-08 | 6 |
vasculature of eye | 3.52e-08 | 6 |
uvea | 3.52e-08 | 6 |
vasculature of head | 3.52e-08 | 6 |
intestine | 1.49e-07 | 17 |
perirenal fat | 1.74e-07 | 2 |
anterior segment of eyeball | 3.65e-07 | 14 |
vascular plexus | 6.11e-07 | 2 |
ventricle of nervous system | 6.11e-07 | 2 |
choroid plexus | 6.11e-07 | 2 |
brain ventricle | 6.11e-07 | 2 |
ventricular system of brain | 6.11e-07 | 2 |
ventricular system of central nervous system | 6.11e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.07e-10 | 14 |