FFCP PHASE1:Hg19::chr10:91092277..91092294,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3437 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5411 | |||
|TSSclassifier=not | |||
|UniProt=B4DLS7 | |||
|association_with_transcript=28bp_to_ENST00000543062_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_IFIT3_5end | |||
|id=chr10:91092277..91092294,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.94e-18!42;CL:0000860!8.53e-16!45;CL:0000766!1.24e-15!76;CL:0002194!2.44e-13!63;CL:0000576!2.44e-13!63;CL:0000040!2.44e-13!63;CL:0000559!2.44e-13!63;CL:0000839!6.76e-13!70;CL:0002009!1.57e-12!65;CL:0000557!2.89e-11!71;CL:0000738!4.46e-11!140;CL:0002087!1.98e-10!119;CL:0002031!3.46e-10!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.24e-14;33!CL:0002057;1.24e-14;33!CL:0000473;3.24e-13;39!CL:0000234;3.24e-13;39!CL:0000576;5.35e-10;48!CL:0000766;1.36e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.76e-20,48;CL:0000234,3.76e-20,48;CL:0000860,4.69e-19,42;CL:0002057,4.69e-19,42;CL:0000766,2.14e-17,72;CL:0002194,1.94e-15,59;CL:0000576,1.94e-15,59;CL:0000040,1.94e-15,59;CL:0000559,1.94e-15,59;CL:0002009,1.21e-14,61;CL:0000839,2.18e-14,66;CL:0000557,7.66e-13,67;CL:0000738,2.81e-11,136;CL:0002087,5.21e-11,115;CL:0002031,1.06e-10,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.54e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.61e-17!112;UBERON:0002390!3.66e-16!102;UBERON:0003061!3.66e-16!102;UBERON:0002371!1.84e-10!80;UBERON:0001474!2.34e-09!86;UBERON:0002405!3.08e-09!115;UBERON:0004765!1.87e-08!101;UBERON:0001434!1.87e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.30e-19,108;UBERON:0002390,5.60e-18,98;UBERON:0003061,5.60e-18,98;UBERON:0002405,6.36e-14,93;UBERON:0002371,4.54e-12,76;UBERON:0001474,2.23e-10,82;UBERON:0004765,6.17e-09,90;UBERON:0001434,1.82e-08,100;UBERON:0000926,1.71e-07,315;UBERON:0004120,1.71e-07,315;UBERON:0006603,1.71e-07,315;UBERON:0003081,3.66e-07,203 | |||
|phase1_expression=2.72517568905835,0,2.25527046553554,2.00146596706261,1.34088328328186,4.36169262050184,5.06599756336621,2.52687949370732,0.261185628199839,0,0,0,0,0.37129905888014,0.331397375727916,10.0848771967766,0,0,0.487932798790507,0.492484232307152,0,0,1.71741592278634,0.410623275218653,0.251085279189606,10.7742902104611,7.88165658719479,7.63494578742689,5.50709987588466,8.82807615623589,2.01260960310899,0,0,0,0.309868802321207,2.41687695228617,0,4.9859586767869,2.80762226458198,5.859293509328,6.71746422719773,1.94336199611388,0.77272670290256,4.9435401185052,3.02300754951048,15.7679639772081,4.41615170120801,1.6446715520873,5.26500830521676,179.807745201344,118.346246416445,470.599637478285,25.8559260552464,7.10033151942209,5.41705946377367,3.01187743268168,1.91034305040492,16.6295378489363,229.869003170548,75.418321362882,344.602710805683,378.339441314163,302.785832269637,685.795623607105,670.963759709286,175.322034429562,710.017363854955,162.80913508637,101.689169091939,458.268462327796,773.700564365445,610.236042831395,2038.0177751193,18.5904651954509,13.6066751977628,16.9823502861784,7.07670376222919,6.45760639218477,8.51845609494525,5.98526761856622,10.94041724595,13.8824756861122,1.75996244461323,3.27683166757279,1.77901850772711,1.28019066769952,1.60158394814405,1.72425731986345,1.32208974556972,1.90810750907073,0,0.587237189370939,0.764546456250458,0,21.8598339562799,0.790152254325231,7.27826149421182,4.71612915298998,2.2616164889946,0.167186495390678,0,1.4203434172042,0,0.445641827540694,0.294605907474837,0.886135578334485,1.08321545506006,0.768547918354051,1.43065282315866,0.493313713811028,0.276350017785848,0,0.296573126324121,0,0,0.113309342697566,1.53288197440768,2.74901956386104,1.26509846009751,0.95569624297229,0,0,1.20460095262218,0.639933055772092,1.24930726552346,2.60454977248419,0,17.338179917327,8.29064606928873,4.34473211648397,2.43806866313962,4.69490601792545,3.58015173161885,3.97583067623023,1.50401373190767,1.01392563272577,2.3858578411533,2.91980922181582,2.3633704291017,0.443458794925128,0.614843499851882,6.48346423713678,0,0,0.649094787309367,2.08955684759121,2.12732736830184,1.43094374583205,5.14795419702115,1.11437250398869,0,0,0,0.56530794192401,0,0,0.626984899610432,6.20200222006389,10.6729878806013,1.00416183829401,1.20848795132744,0,0.24406205754817,0.367663080345869,0,1.25019619597712,0,0.225222960966644,0,0,0,142.322850830948,209.401342640096,0,6.46063537203914,2.15271869829786,21.7151056533679,5.16305917347865,3.54668382198357,1.12135520028461,0,5.67335361359468,4.04574346019696,2.02066008104532,1.14423332179421,3.32986340818849,2.88087962239999,3.04617861383936,1.24864030732128,0,1.04614076386261,0.704606991862589,0.161872944368132,0.140450806702248,1.42907919878425,0.859840221182376,3.09977343527296,251.856605743795,48.9588519971543,0,2.15585442544872,0.168336113954066,0.750711119231785,0.277064115484183,1.75591048352335,0,47.324988555578,0.907457465280168,0.358779271377724,0.85422955527427,3.81477422087211,0.600182192168805,1.64884046781502,4.63752972082133,4.09457083929498,0.337552664482532,1.07180705677318,2.77677151668526,3.03764665519588,7.11242650002772,0.355009592516614,0.10075209822764,2.20428770003634,1.15956511897978,1.90922284413584,0.286804595389004,0,0,0,0.829288440122964,0,0,73.5312801950135,17.3675053312079,4.14404764057442,1.85747171212792,7.94067429836544,18.8107812063352,13.6553598963262,10.1224632551062,14.558804400676,14.1621638660064,10.6771778599993,14.5617812812978,15.1090528146516,11.9271618653381,1.4763109092493,0,0,0,2.53510069643662,0.982827216677626,2.36315962672562,0.441463099414651,4.18160691046586,2.05881372358231,0.219500570817251,0,2.01057944823262,1.94435734832912,3.25808305310325,0,0,1.39116485970092,3.28744343860301,6.92958949253154,3.70388410061289,6.84914948044554,0.790204397959275,0,12.3108503043699,1.63802985597466,2.67536092119711,0,19.3179447428688,12.1926583628452,0,0,0,1.47798971368783,7.13192315507131,0.621984346622316,1.72943944100354,0.75745460055828,1.20645999155121,2.29193055334967,1.17217447210047,1.71072446022705,0.205654985406647,3.00343057843917,35.7283040788223,0.672786506072164,3.05172048183296,1.1734125731352,1.42198887333556,0,0,39.092903137976,26.0018592278415,0,1.41849132023278,0.266422179016099,2.28764789853036,0,0,1.62868092146868,3.55391948742546,0,9.64606006590676,6.10073421020206,1.79951384127703,25.54099393465,9.04062764577828,4.21667878966063,5.27174682081482,5.7430967917057,0,4.77778312003011,0.205476322550383,0.716243852959582,0.560425719967636,22.8555681834236,14.4470475155877,15.1444782810103,0.254094624222463,0,0.773288812777695,0.502548796003046,0,83.1397796581372,32.9077605124427,121.423745436758,0.36807447515742,0.500170521059677,1.08506009479894,7.07100929204744,1.60586089917446,3.31175071571263,3.16281820480326,3.61135319673263,4.5481500811197,4.1389228517002,0,0.368738337083406,9.81784843489336,2.34961388955289,0.686286847621712,1.03384013061444,10.3542816392936,0.640365346820666,0.3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| |||
|short_description=p2@IFIT3 | |||
}} |
Revision as of 04:05, 11 January 2014
Short description: | p2@IFIT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IFIT3_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 28bp_to_ENST00000543062_5end |
EntrezGene: | IFIT3 |
HGNC: | 5411 |
UniProt: | B4DLS7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.76e-20 | 48 |
phagocyte | 3.76e-20 | 48 |
classical monocyte | 4.69e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.69e-19 | 42 |
myeloid leukocyte | 2.14e-17 | 72 |
monopoietic cell | 1.94e-15 | 59 |
monocyte | 1.94e-15 | 59 |
monoblast | 1.94e-15 | 59 |
promonocyte | 1.94e-15 | 59 |
macrophage dendritic cell progenitor | 1.21e-14 | 61 |
myeloid lineage restricted progenitor cell | 2.18e-14 | 66 |
granulocyte monocyte progenitor cell | 7.66e-13 | 67 |
leukocyte | 2.81e-11 | 136 |
nongranular leukocyte | 5.21e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 1.06e-10 | 120 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 9.30e-19 | 108 |
hematopoietic system | 5.60e-18 | 98 |
blood island | 5.60e-18 | 98 |
immune system | 6.36e-14 | 93 |
bone marrow | 4.54e-12 | 76 |
bone element | 2.23e-10 | 82 |
skeletal element | 6.17e-09 | 90 |
skeletal system | 1.82e-08 | 100 |
mesoderm | 1.71e-07 | 315 |
mesoderm-derived structure | 1.71e-07 | 315 |
presumptive mesoderm | 1.71e-07 | 315 |
lateral plate mesoderm | 3.66e-07 | 203 |