FFCP PHASE1:Hg19::chr11:7991573..7991621,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8665 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3275 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-176bp_to_ENST00000533626_5end | |||
|coexpression_cluster_id=C465 | |||
|description=CAGE_peak_4_at_EIF3F_5end | |||
|id=chr11:7991573..7991621,+ | |||
|ontology_enrichment_celltype=CL:0000197!1.08e-16!6;CL:0000098!1.08e-16!6;CL:0002167!1.08e-16!6;CL:0000057!7.88e-14!75;CL:0002620!3.54e-11!23;CL:0000055!2.73e-09!180;CL:0000135!1.02e-08!3;CL:0000386!1.02e-08!3;CL:0000388!1.02e-08!3;CL:0002561!3.40e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000197;2.63e-59;6!CL:0000098;2.63e-59;6!CL:0002167;2.63e-59;6!CL:0000222;3.67e-23;1!CL:0000710;3.26e-18;20!CL:0000075;1.30e-13;27!CL:0002262;3.62e-12;2!CL:1000398;3.62e-12;2!CL:0002077;8.18e-10;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,2.63e-59,6;CL:0000098,2.63e-59,6;CL:0002167,2.63e-59,6;CL:0000710,3.27e-18,20;CL:0000075,1.30e-13,27;CL:0002262,3.62e-12,2;CL:1000398,3.62e-12,2;CL:0002077,6.82e-11,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2513!2.10e-07!1;DOID:3369!3.20e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:2513;3.67e-23;1!DOID:3451;2.74e-12;2!DOID:4159;2.74e-12;2!DOID:0060122;2.74e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,4.10e-23,1;DOID:3451,2.90e-12,2;DOID:4159,2.90e-12,2;DOID:0060122,2.90e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0002199!7.51e-11!45;UBERON:0002416!7.51e-11!45;UBERON:0002097!4.54e-10!40;UBERON:0000043!1.02e-08!3;UBERON:0003102!1.48e-07!95;UBERON:0005705!2.67e-07!1;UBERON:0008193!2.67e-07!1;UBERON:0002514!2.67e-07!1;UBERON:0003462!2.67e-07!1;UBERON:0008001!2.67e-07!1;UBERON:0007914!2.67e-07!1;UBERON:0003457!2.67e-07!1;UBERON:0009292!2.67e-07!1;UBERON:0007375!2.67e-07!1;UBERON:0003323!2.67e-07!1;UBERON:0002397!2.67e-07!1;UBERON:0001709!2.67e-07!1;UBERON:0004066!2.67e-07!1;UBERON:0002244!2.67e-07!1;UBERON:0005620!2.67e-07!1;UBERON:0004068!2.67e-07!1;UBERON:0004362!2.67e-07!1;UBERON:0005933!3.40e-07!1;UBERON:0005942!3.40e-07!1;UBERON:0005932!3.40e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;3.62e-12;2!UBERON:0003497;3.62e-12;2!UBERON:0003909;3.62e-12;2!UBERON:0003835;3.62e-12;2!UBERON:0001280;1.51e-08;3!UBERON:0004647;1.51e-08;3!UBERON:0000014;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,3.62e-12,2;UBERON:0003497,3.62e-12,2;UBERON:0003909,3.62e-12,2;UBERON:0003835,3.62e-12,2;UBERON:0001280,1.51e-08,3;UBERON:0004647,1.51e-08,3;UBERON:0005171,1.51e-08,3;UBERON:0000014,9.11e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14541457059314,0.150238058906597,0,0,0.213557388818567,0.211931901159562,0,0,0.257640540045629,0.37223371266318,0,0,0,0.184099797284599,0,0,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03115498439341,9.63516539504674,8.2005255817646,5.03708084468667,0.902838299183157,2.27407504055985,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0.511707249066704,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17727711363265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.523014231561666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52369796457302,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@EIF3F | |||
}} |
Revision as of 06:26, 11 January 2014
Short description: | p4@EIF3F |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_EIF3F_5end |
Coexpression cluster: | C465_Olfactory_basal_Fibroblast_Preadipocyte_Adipocyte_small_Prostate |
Association with transcript: | -176bp_to_ENST00000533626_5end |
EntrezGene: | EIF3F |
HGNC: | 3275 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 2.63e-59 | 6 |
sensory epithelial cell | 2.63e-59 | 6 |
olfactory epithelial cell | 2.63e-59 | 6 |
neurecto-epithelial cell | 3.27e-18 | 20 |
columnar/cuboidal epithelial cell | 1.30e-13 | 27 |
endothelial cell of sinusoid | 3.62e-12 | 2 |
endothelial cell of hepatic sinusoid | 3.62e-12 | 2 |
ecto-epithelial cell | 6.82e-11 | 34 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 3.62e-12 | 2 |
abdomen blood vessel | 3.62e-12 | 2 |
sinusoid | 3.62e-12 | 2 |
abdominal segment blood vessel | 3.62e-12 | 2 |
liver parenchyma | 1.51e-08 | 3 |
liver lobule | 1.51e-08 | 3 |
hepatic duct | 1.51e-08 | 3 |
zone of skin | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 4.10e-23 | 1 |
skin carcinoma | 2.90e-12 | 2 |
skin cancer | 2.90e-12 | 2 |
integumentary system cancer | 2.90e-12 | 2 |