FFCP PHASE1:Hg19::chr11:8932828..8932841,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56672 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1170 | |||
|TSSclassifier=strong | |||
|UniProt=E9PPN7 | |||
|association_with_transcript=0bp_to_ENST00000530281_5end | |||
|description=CAGE_peak_4_at_AKIP1_5end | |||
|id=chr11:8932828..8932841,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.14e-18!119;CL:0002321!8.51e-16!248;CL:0000220!1.64e-15!246;CL:0000055!2.15e-15!180;CL:0000144!5.07e-12!625;CL:0000548!5.74e-12!679;CL:0000004!5.74e-12!679;CL:0000255!5.74e-12!679;CL:0000213!8.94e-12!57;CL:0000215!8.94e-12!57;CL:0000012!1.08e-11!682;CL:0002371!3.43e-10!591;CL:0000192!1.04e-09!42;CL:0000514!1.04e-09!42;CL:0000115!2.39e-09!35;CL:0002139!2.91e-09!24;CL:0000183!4.64e-09!59;CL:0000393!6.41e-09!60;CL:0000211!6.41e-09!60;CL:0002078!9.08e-09!44;CL:0000680!2.48e-08!57;CL:0000056!2.48e-08!57;CL:0000355!2.48e-08!57;CL:0000359!2.80e-08!32;CL:0000187!8.19e-08!54;CL:0000133!1.01e-07!59;CL:0002319!1.72e-07!25;CL:0000071!2.40e-07!18;CL:0002546!2.40e-07!18;CL:0000095!3.95e-07!17;CL:0000123!3.95e-07!17;CL:0000221!5.03e-07!71;CL:0000333!9.74e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.41e-09;24!CL:0000115;7.71e-09;36!CL:0000095;3.17e-07;17!CL:0000071;4.15e-07;18!CL:0000243;4.61e-07;15!CL:0000125;4.61e-07;15!CL:0000359;5.24e-07;32!CL:0000213;6.02e-07;58!CL:0000215;6.02e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.42e-18,121;CL:0002321,1.53e-15,250;CL:0000213,2.72e-13,58;CL:0000215,2.72e-13,58;CL:0000115,2.90e-11,36;CL:0002078,3.22e-10,45;CL:0002139,1.75e-09,24;CL:0000192,3.54e-08,43;CL:0000514,3.54e-08,43;CL:0000071,1.44e-07,18;CL:0002546,1.44e-07,18;CL:0000095,3.47e-07,17;CL:0000123,3.47e-07,17;CL:0000359,3.85e-07,32;CL:0000680,3.87e-07,58;CL:0000056,3.87e-07,58;CL:0000355,3.87e-07,58;CL:0000243,4.99e-07,15;CL:0000125,4.99e-07,15;CL:0000030,4.99e-07,15;CL:0000339,4.99e-07,15;CL:0000128,6.35e-07,7;CL:0000126,6.35e-07,7;CL:0000127,6.35e-07,7;CL:0002453,6.35e-07,7;CL:0000393,7.27e-07,61;CL:0000211,7.27e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002546;4.15e-07;18!CL:0000339;4.61e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!8.08e-17!79;UBERON:0007798!8.08e-17!79;UBERON:0000055!1.17e-13!69;UBERON:0001981!6.49e-12!60;UBERON:0007500!6.49e-12!60;UBERON:0004537!6.49e-12!60;UBERON:0006965!6.49e-12!60;UBERON:0004872!9.34e-11!84;UBERON:0004535!2.91e-10!110;UBERON:0001009!3.73e-09!113;UBERON:0001637!5.57e-09!42;UBERON:0003509!5.57e-09!42;UBERON:0004572!5.57e-09!42;UBERON:0000486!6.70e-08!82;UBERON:0000914!1.34e-07!83;UBERON:0002329!1.34e-07!83;UBERON:0003077!1.34e-07!83;UBERON:0003059!1.34e-07!83;UBERON:0007282!1.34e-07!83;UBERON:0009618!1.34e-07!83;UBERON:0007285!1.34e-07!83;UBERON:0001134!1.82e-07!61;UBERON:0002036!1.82e-07!61;UBERON:0003082!1.82e-07!61;UBERON:0001986!2.40e-07!18;UBERON:0004638!2.40e-07!18;UBERON:0004852!2.40e-07!18;UBERON:0004290!4.59e-07!70;UBERON:0002385!6.35e-07!63;UBERON:0001015!6.35e-07!63;UBERON:0000383!6.35e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0002049;3.09e-08;75!UBERON:0007798;3.09e-08;75!UBERON:0000055;1.30e-07;65!UBERON:0007500;2.10e-07;56!UBERON:0001981;2.10e-07;56!UBERON:0004537;2.10e-07;56!UBERON:0004638;4.15e-07;18!UBERON:0001986;4.15e-07;18!UBERON:0004852;4.15e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,9.72e-17,78;UBERON:0007798,9.72e-17,78;UBERON:0000055,5.83e-13,68;UBERON:0007500,1.98e-11,59;UBERON:0001981,1.98e-11,59;UBERON:0004537,1.98e-11,59;UBERON:0006965,1.98e-11,59;UBERON:0004535,2.35e-11,109;UBERON:0001009,1.26e-10,112;UBERON:0004872,2.81e-09,83;UBERON:0004638,1.44e-07,18;UBERON:0001986,1.44e-07,18;UBERON:0004852,1.44e-07,18;UBERON:0007503,1.67e-07,78;UBERON:0001637,3.16e-07,42;UBERON:0003509,3.16e-07,42;UBERON:0004572,3.16e-07,42;UBERON:0000490,5.86e-07,148;UBERON:0000926,6.15e-07,315;UBERON:0004120,6.15e-07,315;UBERON:0006603,6.15e-07,315;UBERON:0000486,8.26e-07,83 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.845726424575827,1.0007329835313,0,0.872338524100369,0,0,0.261185628199839,0,0,1.52908960491121,3.4289707169699,0.37129905888014,0,5.3786011716142,4.21886169616784,5.84248072309899,8.29485757943862,5.66356867153224,3.26401105990805,4.38836610069323,3.14859585844162,1.36874425072884,1.50651167513763,0,0.328402357799783,0.0787107813136792,0,0,0,0,0,0.369754010166788,0,0.142169232487422,2.05520307534393,0,0,0,0,0,0.257575567634187,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0.32592226663359,0,0,0,0.883817722424512,0,0.270803863765016,0.25618263945135,0.130059347559878,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0.12786256184353,0.361439152384566,1.00267582127178,0.724232594804119,0,0.973269740605272,2.6469748805939,2.88248216701333,2.10803485663503,0.327447688744282,0,0,0,0.174129737299267,0.132957960518865,0.238490624305342,0.571994910780128,0,0.596287222100115,0.860234595106124,1.73570250803797,0.56530794192401,1.67799774483962,1.37559020970034,0.626984899610432,0.258416759169329,1.42306505074684,0.66944122552934,9.26507429351038,3.80136052859256,6.10155143870424,4.41195696415042,2.43042584364528,1.16089646769304,1.12264686313085,1.35133776579987,1.53316637465883,1.89853131913626,1.64881569537367,0,0,0,1.49091585508596,1.13967460498122,1.05927344650575,0.286836620748814,0.354668382198357,1.68203280042692,0,1.2333377420858,0.933633106199299,0.538842688278752,0.326923806226917,1.36221684880438,0,3.28050004567315,0,0,0.149448680551801,0.23486899728753,0.161872944368132,0.280901613404497,0,0.368502951935304,0.206651562351531,1.18800285728205,0,0.910161361938026,1.43723628363248,1.0100166837244,0.250237039743928,0.277064115484183,0.438977620880838,0,0.600952235626387,1.58805056424029,0.358779271377724,1.2813443329114,0.423863802319124,0.300091096084402,0.721367704669072,0.257640540045629,0.558350568994769,0,0.487185025805993,1.00973509697646,1.74894807420369,1.45481451136931,0.355009592516614,1.41052937518696,1.01736355386293,0.386521706326594,0.818238361772504,0,0.731842236777572,0.795178609928912,1.62671520017326,1.24393266018445,1.00928340350251,2.18986415445498,1.56449532329816,8.36213219650751,1.38134921352481,0,0.721879481669586,0.828147600278907,0.674338760312407,0.482022059766964,0.661763836394364,0.653638332277218,0.474541238222193,0.404493924480493,0.784885860501384,0,2.21446636387394,1.40241773803446,2.4694440679884,0,0,0,0,0.882926198829301,0,0.171567810298526,1.75600456653801,0,0,0,0,1.03993478527958,0,0.695582429850461,1.29149563659404,9.81691844775302,15.7415074276048,12.3665198952489,0,0,0,2.57404691653161,0.594524649154913,4.68669169933885,5.37542810236351,2.26840155587818,0.268675568108545,0.581267877027924,0,0.492663237895943,1.58487181223807,0.621984346622316,1.15295962733569,1.38866676769018,0.253991577168676,0.381988425558278,1.17217447210047,0,0,0.600686115687835,0,1.90622843387113,0.43596006883328,1.10007428731425,5.68795549334222,0,0.845302752556,7.1803291477915,4.16029747645464,1.02882949704857,1.41849132023278,0.532844358032199,0.428933980974443,0.542621605391443,0.823240336780769,2.60588947434988,0,0.791951872933429,1.20575750823834,0.871533458600294,0.899756920638513,0,0,2.10833939483032,0.958499421966331,0,2.85273810081437,1.01346914667305,0.410952645100767,2.32779252211864,0.112085143993527,0.394061520403854,0.215627574859517,0,0.76228387266739,0,0.773288812777695,1.17261385734044,0.637938751653163,0,0,0,0.49076596687656,0.500170521059677,0,1.24782516918484,0.535286966391485,0.473107245101804,0.35142424497814,1.50473049863859,2.27407504055985,1.03473071292505,1.32845119707087,0.553107505625109,1.73767228936166,2.54541504701563,3.0882908142977,0,0.215714200818617,0,0.606255142892519,4.99306318531491,2.72151263996712,0.496215615637554,0.460385919864187,0.280660094433074,0.512556597022804,1.53512174720011,1.28683136914886,0,1.07946785661859,1.06537035187876,0.574890092096664,0,0.697262270759755,0,3.00759705454927,0,2.29628896329214,1.45672934405374,2.75361271414791,0.451199612907412,0,0,0,0.105551628892876,4.54933536283586,2.38131187387122,0.647747748306418,7.71136263451447,0.270946437543853,1.00337954770971,0,0,0.447749509444357,0,0,0.256450125116389,1.31205858279882,0.325378394664303,0.103041011647722,0.27470839445503,0.742585499285292,1.14853107599234,0.650060246036521,0,1.06337790121334,0.154048617114644,0.15350367472613,0.551346289938122,0,0,0.852266274161009,1.95870478422822,0,0,0,0,0.464845549297286,0.31481234683064,2.0911118104818,0.924100740528266,1.06461206063404,0.869932992075073,0.74129687641568,0.286249773483982,2.232950216158,0.632758849437452,2.47819252100972,1.535386747868,0,1.90921948755562,0,0.179872457583315,1.37268514868027,0.706874414074119,2.22400729730648,0,1.263775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| |||
|short_description=p4@AKIP1 | |||
}} |
Revision as of 06:28, 11 January 2014
Short description: | p4@AKIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AKIP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000530281_5end |
EntrezGene: | AKIP1 |
HGNC: | 1170 |
UniProt: | E9PPN7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.42e-18 | 121 |
embryonic cell | 1.53e-15 | 250 |
lining cell | 2.72e-13 | 58 |
barrier cell | 2.72e-13 | 58 |
endothelial cell | 2.90e-11 | 36 |
meso-epithelial cell | 3.22e-10 | 45 |
endothelial cell of vascular tree | 1.75e-09 | 24 |
smooth muscle cell | 3.54e-08 | 43 |
smooth muscle myoblast | 3.54e-08 | 43 |
blood vessel endothelial cell | 1.44e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.44e-07 | 18 |
neuron associated cell | 3.47e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 3.47e-07 | 17 |
vascular associated smooth muscle cell | 3.85e-07 | 32 |
muscle precursor cell | 3.87e-07 | 58 |
myoblast | 3.87e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.87e-07 | 58 |
glial cell (sensu Vertebrata) | 4.99e-07 | 15 |
glial cell | 4.99e-07 | 15 |
glioblast | 4.99e-07 | 15 |
glioblast (sensu Vertebrata) | 4.99e-07 | 15 |
oligodendrocyte | 6.35e-07 | 7 |
macroglial cell | 6.35e-07 | 7 |
astrocyte | 6.35e-07 | 7 |
oligodendrocyte precursor cell | 6.35e-07 | 7 |
electrically responsive cell | 7.27e-07 | 61 |
electrically active cell | 7.27e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
vasculature | 9.72e-17 | 78 |
vascular system | 9.72e-17 | 78 |
vessel | 5.83e-13 | 68 |
epithelial tube open at both ends | 1.98e-11 | 59 |
blood vessel | 1.98e-11 | 59 |
blood vasculature | 1.98e-11 | 59 |
vascular cord | 1.98e-11 | 59 |
cardiovascular system | 2.35e-11 | 109 |
circulatory system | 1.26e-10 | 112 |
splanchnic layer of lateral plate mesoderm | 2.81e-09 | 83 |
blood vessel endothelium | 1.44e-07 | 18 |
endothelium | 1.44e-07 | 18 |
cardiovascular system endothelium | 1.44e-07 | 18 |
epithelial vesicle | 1.67e-07 | 78 |
artery | 3.16e-07 | 42 |
arterial blood vessel | 3.16e-07 | 42 |
arterial system | 3.16e-07 | 42 |
unilaminar epithelium | 5.86e-07 | 148 |
mesoderm | 6.15e-07 | 315 |
mesoderm-derived structure | 6.15e-07 | 315 |
presumptive mesoderm | 6.15e-07 | 315 |
multilaminar epithelium | 8.26e-07 | 83 |