FFCP PHASE1:Hg19::chr11:71906958..71906968,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:71906958..71906968,+ | |||
|id=chr11:71906958..71906968,+ | |||
|ontology_enrichment_celltype=CL:0002541!5.88e-12!3;CL:0002150!9.73e-12!3;CL:0000861!9.73e-12!3 | |||
|ontology_enrichment_celltype_v019=CL:0002581;5.13e-23;1!CL:0002541;1.08e-08;3!CL:0000083;7.91e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,5.13e-23,1;CL:0002541,1.21e-08,3;CL:0000083,7.27e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006298;2.34e-23;1!UBERON:0008801;5.13e-23;1 | |||
|ontology_enrichment_disease=DOID:305!4.44e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:1799;2.34e-23;1!DOID:10165;2.34e-23;1!DOID:1798;2.34e-23;1!DOID:1793;7.91e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.67e-23,1;DOID:10165,1.67e-23,1;DOID:1798,1.67e-23,1;DOID:1793,7.27e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000476!5.88e-12!3;UBERON:0000920!5.88e-12!3;UBERON:0001896!2.36e-11!3;UBERON:0005290!2.36e-11!3;UBERON:0010096!2.36e-11!3;UBERON:0001829!9.94e-09!2;UBERON:0005631!9.94e-09!14;UBERON:0000158!9.94e-09!14;UBERON:0003124!1.47e-08!7;UBERON:0003127!5.03e-08!2;UBERON:0007023!4.14e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.71e-44;2!UBERON:0002171;1.07e-23;1!UBERON:0006518;1.07e-23;1!UBERON:0008949;1.07e-23;1!UBERON:0000101;1.07e-23;1!UBERON:0002167;1.07e-23;1!UBERON:0001736;2.34e-23;1!UBERON:0001831;5.13e-23;1!UBERON:0001567;5.13e-23;1!UBERON:0001044;1.36e-15;6!UBERON:0003293;1.36e-15;6!UBERON:0003294;1.36e-15;6!UBERON:0010047;1.36e-15;6!UBERON:0003408;1.36e-15;6!UBERON:0000167;1.36e-15;6!UBERON:0005406;3.24e-12;2!UBERON:0004089;3.24e-12;2!UBERON:0001896;1.08e-08;3!UBERON:0003124;1.08e-08;3!UBERON:0000920;1.08e-08;3!UBERON:0005290;1.08e-08;3!UBERON:0001041;3.18e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.22e-44,2;UBERON:0002171,1.07e-23,1;UBERON:0006518,1.07e-23,1;UBERON:0008949,1.07e-23,1;UBERON:0000101,1.07e-23,1;UBERON:0002167,1.07e-23,1;UBERON:0001736,2.10e-23,1;UBERON:0006298,2.10e-23,1;UBERON:0001831,4.10e-23,1;UBERON:0001567,4.10e-23,1;UBERON:0008801,4.10e-23,1;UBERON:0001044,1.22e-15,6;UBERON:0003293,1.22e-15,6;UBERON:0003294,1.22e-15,6;UBERON:0010047,1.22e-15,6;UBERON:0000167,1.22e-15,6;UBERON:0004089,2.90e-12,2;UBERON:0005406,3.24e-12,2;UBERON:0003408,8.84e-10,10;UBERON:0001896,1.12e-08,3;UBERON:0005290,1.12e-08,3;UBERON:0010096,1.12e-08,3;UBERON:0000920,1.21e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,3.41079048757134,0.108647371922008,0.638002319463839,2.01514705484097,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0.580537987734511,0.365446585430928,0.656923656425674,0,0,0,0,0,0,0,0,0,0.599428828746391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.236417121897595,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17466153824464,0.314408610199332,4.14239055347196,0,0,0,0,0,0,0,0,0,0,0,0,2.29363678276028,0.998361463831671,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,2.3571602503328,0,0,0,0,0,0,0,1.64477330057155,0,0,0,0,0,0,0,0.177404740325278,0,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2936464170227,0,0,0,0,0,0,0,0,0,0.109265571963696,0.126698501011437,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.190941474834495,0,0,0,0,0.215166616178029,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:71906958..71906968,+ | |||
}} |
Revision as of 09:14, 11 January 2014
Short description: | p@chr11:71906958..71906968, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:71906958..71906968, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 5.13e-23 | 1 |
chorionic membrane mesenchymal stem cell | 1.21e-08 | 3 |
epithelial cell of pancreas | 7.27e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.22e-44 | 2 |
lower lobe of right lung | 1.07e-23 | 1 |
right lung lobe | 1.07e-23 | 1 |
lower lobe of lung | 1.07e-23 | 1 |
lobe of lung | 1.07e-23 | 1 |
right lung | 1.07e-23 | 1 |
submandibular gland | 2.10e-23 | 1 |
submandibular gland primordium | 2.10e-23 | 1 |
parotid gland | 4.10e-23 | 1 |
cheek | 4.10e-23 | 1 |
parotid gland primordium | 4.10e-23 | 1 |
saliva-secreting gland | 1.22e-15 | 6 |
gland of oral region | 1.22e-15 | 6 |
gland of foregut | 1.22e-15 | 6 |
oral gland | 1.22e-15 | 6 |
oral cavity | 1.22e-15 | 6 |
midface | 2.90e-12 | 2 |
perirenal fat | 3.24e-12 | 2 |
gland of gut | 8.84e-10 | 10 |
medulla oblongata | 1.12e-08 | 3 |
myelencephalon | 1.12e-08 | 3 |
future myelencephalon | 1.12e-08 | 3 |
egg chorion | 1.21e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.67e-23 | 1 |
endocrine pancreas cancer | 1.67e-23 | 1 |
pancreatic endocrine carcinoma | 1.67e-23 | 1 |
pancreatic cancer | 7.27e-07 | 4 |