FFCP PHASE1:Hg19::chr11:114182849..114182865,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:114182849..114182865,+ | |||
|id=chr11:114182849..114182865,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.28e-19!180;CL:0000057!2.02e-13!75;CL:0000222!8.97e-12!119;CL:0000680!4.47e-10!57;CL:0000056!4.47e-10!57;CL:0000355!4.47e-10!57;CL:0000187!9.97e-09!54;CL:0000183!1.97e-08!59;CL:0000220!4.24e-07!246;CL:0002321!7.52e-07!248;CL:0000393!7.98e-07!60;CL:0000211!7.98e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000136;6.40e-14;13!CL:0000135;2.85e-10;3!CL:0000388;2.85e-10;3!CL:0002615;2.99e-10;3!CL:0002579;6.22e-10;3!CL:0000499;1.05e-08;28!CL:0002334;1.06e-08;12!CL:0000153;5.29e-08;9!CL:0000447;5.29e-08;9!CL:0002617;4.78e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.36e-15,15;CL:0000135,2.39e-10,3;CL:0000388,2.39e-10,3;CL:0002615,3.91e-10,3;CL:0002579,9.14e-10,3;CL:0000499,1.05e-08,28;CL:0002334,1.07e-08,12;CL:0000153,4.96e-08,9;CL:0000447,4.96e-08,9;CL:0000048,3.57e-07,427;CL:0002617,3.66e-07,2;CL:0000723,6.54e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;1.41e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.39e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005256!1.91e-13!143;UBERON:0001134!4.08e-11!61;UBERON:0002036!4.08e-11!61;UBERON:0003082!4.08e-11!61;UBERON:0002385!6.65e-11!63;UBERON:0001015!6.65e-11!63;UBERON:0000383!6.65e-11!63;UBERON:0000914!6.72e-11!83;UBERON:0002329!6.72e-11!83;UBERON:0003077!6.72e-11!83;UBERON:0003059!6.72e-11!83;UBERON:0007282!6.72e-11!83;UBERON:0009618!6.72e-11!83;UBERON:0007285!6.72e-11!83;UBERON:0002100!7.84e-11!216;UBERON:0004290!2.92e-10!70;UBERON:0000490!4.77e-10!138;UBERON:0003914!1.82e-09!118;UBERON:0000486!1.01e-08!82;UBERON:0003104!2.52e-07!238;UBERON:0009142!2.52e-07!238;UBERON:0003688!8.24e-07!6;UBERON:0002358!8.24e-07!6;UBERON:0003684!8.24e-07!6;UBERON:0001178!8.24e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;6.59e-21;9!UBERON:0000042;6.59e-21;9!UBERON:0003688;1.82e-18;6!UBERON:0002358;1.82e-18;6!UBERON:0003684;1.82e-18;6!UBERON:0001178;1.82e-18;6!UBERON:0007846;2.85e-10;3!UBERON:0000043;2.85e-10;3!UBERON:0007845;2.85e-10;3!UBERON:0005406;1.03e-07;2!UBERON:0000310;3.23e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.49e-18,6;UBERON:0002358,3.49e-18,6;UBERON:0003684,3.49e-18,6;UBERON:0001178,3.49e-18,6;UBERON:0004457,4.69e-15,12;UBERON:0000042,4.69e-15,12;UBERON:0007846,2.39e-10,3;UBERON:0000043,2.39e-10,3;UBERON:0007845,2.39e-10,3;UBERON:0002100,7.53e-08,199;UBERON:0005406,1.02e-07,2;UBERON:0000310,2.39e-07,10 | |||
|phase1_expression=1.63510541343501,3.63970890614671,1.26858963686374,5.00366491765652,10.2801051718276,6.97870819280295,0,0,0.783556884599516,0,0,0,0,0.866364470720326,1.65698687863958,0.672325146451775,0,0.730310090387373,0,0.246242116153576,0.204000691244253,0.940364164434263,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.255725123687061,0.361439152384566,2.00535164254356,1.73815822752988,0,1.45990461090791,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0,0,0,0,0,0,0,0.488124115096339,0,0.81014194788176,0.267899184852239,0,0.450445921933289,0,0,0,0,0,0,1.49091585508596,0.506522046658319,0.132409180813219,0.860509862246441,0.709336764396714,0.560677600142307,2.1349799145941,0,0,0.269421344139376,0.490385709340376,0,0,0.234321431833797,0.624320153660641,0,0,0,0.485618833104395,0,0,0,0.309977343527296,0,0.989067717114227,0,1.43723628363248,0,0,0,0.438977620880838,0.30648779579902,0.300476117813194,0.453728732640084,0.179389635688862,0.640672166455702,0.211931901159562,0.600182192168805,0.92747276314595,1.28820270022815,0.558350568994769,0.168776332241266,0.876933046450788,0.504867548488229,0.460249493211497,0.323292113637624,0,0.503760491138201,0.169560592310488,0,0,0,0,0,0,0,0,0,0,3.85944562915731,0,3.71494342425583,0.721879481669586,0.118306800039844,0.674338760312407,0,0.220587945464788,0.217879444092406,0,0,0.196221465125346,0.38474715694639,0,0,0.8231480226628,1.47008711385542,13.9430538304014,7.86261773342101,6.49868897349544,0,0,0,0,0,0,0,0,0,0,0,0.587043471179108,0.577465791044295,0,1.52203321787679,0,0,0,0,0,0.93733833986777,0.335964256397719,0,0.0895585227028483,0.290633938513962,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0.542621605391443,0.823240336780769,0.325736184293735,0,1.58390374586686,0,0.871533458600294,0.499864955910285,0,0,0,0,1.14861935834114,0,1.15825045334063,1.2328579353023,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,1.89885516589815,0.415941723061614,2.14114786556594,0.788512075169673,0.117141414992713,0.601892199455438,15.9185252839189,3.10419213877515,0,0.737476674166813,0.173767228936166,0,0,0,0,0,0,0,0,2.23297027036899,0.767309866440312,1.68396056659844,2.05022638809122,4.09365799253363,1.28683136914886,4.45254199334973,0,0.355123450626254,0.164254312027618,0,0.697262270759755,0,0,0,0.459257792658427,0,0.786746489756545,0,0,0,1.46139224653261,0.105551628892876,0,0,0.647747748306418,0,0.270946437543853,1.00337954770971,0.254876273045038,0.831076008928724,0.895499018888713,0,0,0,0,0,0.206082023295445,0,0,0,0,4.82051789532479,0.386682873168488,0.616194468458578,0.767518373630648,0.413509717453592,0.429680979473094,1.59518363305651,0.0852266274161009,0.178064071293475,0,0.192190067365106,0,0,0.929691098594572,0.62962469366128,0.6970372701606,0,0,0,0.18532421910392,0.572499546967965,0,0.316379424718726,1.5250415513906,0,0.42793898803392,0,0,0.719489830333259,1.64722217841633,0.589062011728432,0,3.17020642346017,1.26377536871694,0,0,0,0.272999822815972,1.69686518344455,2.26016233240486,0,0.66343897524122,0.876901770507525,0.578775534266688,0,0,0.30982349809975,1.40847801266121,0.143411352204052,0.0982490410131212,0.35667105148125,0.709522128141196,1.26664581178598,2.30506425071931,0.379473173765715,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.568272293612826,0,0,0,0,0,0.222617410045812,0,0,0.597743964753209,0,0,0,0,0.622079175323615,0,0,0,0.197286811273867,0,0,0,0,0,0,0,1.44999915086959,0,0,0.472775363535873,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,1.02547850262301,0,0,0,0.31900115973192,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,1.26598838716816,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.758238955541855,0,0,0,0,0,0,0,0.416024019039416,0,0,0.0870592065804026,0,0.171986032471617,0.0967563312890851,0.0730893170861856,0.246346371159628,0.387956065953678,0,0,0.411125773940253,0,0,0.391102765469606,0.0801588202515337,0.213452994739353,0.19980960958213,0,0,0,0.288109595976299,0,0.471388069233591,0.135904206073614,0,0.101998217636322,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0.223171457441873,0,0.720599767084807,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0,0,0,0,0,0.662091970365432,0,0.542999601753713,0.864221491201268,0.326587360109409,0,0,0.170388021785422,0.226624183040251,1.90517903781507,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,1.7548292581589,0,1.31149052283922,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0.705797459094515,0,0,0.895528817321244,0.934853239388898,1.66441758450784,0.757612021100357,0.251567901752575,0,0.915360273587694,1.05861646634267,0.777186002913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| |||
|short_description=p@chr11:114182849..114182865,+ | |||
}} |
Revision as of 10:25, 11 January 2014
Short description: | p@chr11:114182849..114182865, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:114182849..114182865, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.36e-15 | 15 |
fibrocyte | 2.39e-10 | 3 |
tendon cell | 2.39e-10 | 3 |
adipocyte of omentum tissue | 3.91e-10 | 3 |
omentum preadipocyte | 9.14e-10 | 3 |
stromal cell | 1.05e-08 | 28 |
preadipocyte | 1.07e-08 | 12 |
GAG secreting cell | 4.96e-08 | 9 |
carbohydrate secreting cell | 4.96e-08 | 9 |
multi fate stem cell | 3.57e-07 | 427 |
adipocyte of breast | 3.66e-07 | 2 |
somatic stem cell | 6.54e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.49e-18 | 6 |
peritoneum | 3.49e-18 | 6 |
abdominal cavity | 3.49e-18 | 6 |
visceral peritoneum | 3.49e-18 | 6 |
cavity lining | 4.69e-15 | 12 |
serous membrane | 4.69e-15 | 12 |
dense regular connective tissue | 2.39e-10 | 3 |
tendon | 2.39e-10 | 3 |
regular connective tissue | 2.39e-10 | 3 |
trunk | 7.53e-08 | 199 |
perirenal fat | 1.02e-07 | 2 |
breast | 2.39e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.39e-07 | 2 |