FFCP PHASE1:Hg19::chr11:126077478..126077485,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=84881 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=25898 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=26bp_to_uc010sbl.1_5end | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_4_at_RPUSD4_5end | |||
|id=chr11:126077478..126077485,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001723!3.11e-27!3;UBERON:0001033!3.11e-27!3;UBERON:0010056!3.11e-27!3;UBERON:0002426!1.53e-21!1;UBERON:0003831!1.53e-21!1;UBERON:0003898!1.53e-21!1;UBERON:0004830!1.53e-21!1;UBERON:0001774!1.53e-21!1;UBERON:0003830!1.53e-21!1;UBERON:0005175!1.53e-21!1;UBERON:0003897!1.53e-21!1;UBERON:0001103!1.53e-21!1;UBERON:0010084!1.53e-21!1;UBERON:0001301!2.82e-21!1;UBERON:0000989!5.16e-21!1;UBERON:0008811!5.16e-21!1;UBERON:0006258!5.16e-21!1;UBERON:0005876!5.16e-21!1;UBERON:0004874!5.16e-21!1;UBERON:0008814!1.78e-12!15;UBERON:0001630!1.82e-11!2;UBERON:0005090!1.82e-11!2;UBERON:0000341!2.23e-11!2;UBERON:0001042!7.07e-09!10;UBERON:0009145!7.07e-09!10;UBERON:0003135!3.50e-08!11;UBERON:0006562!3.76e-08!11;UBERON:0006947!5.54e-08!3;UBERON:0004054!5.54e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002426;1.23e-66;1!UBERON:0003831;1.23e-66;1!UBERON:0003898;1.23e-66;1!UBERON:0004830;1.23e-66;1!UBERON:0003830;1.23e-66;1!UBERON:0005175;1.23e-66;1!UBERON:0001774;1.23e-66;1!UBERON:0001103;1.23e-66;1!UBERON:0005090;3.61e-34;2!UBERON:0001630;3.61e-34;2!UBERON:0000341;5.96e-34;2!UBERON:0001134;1.33e-17;16!UBERON:0002036;1.33e-17;16!UBERON:0000974;2.59e-12;6!UBERON:0002385;6.09e-10;31!UBERON:0001015;6.09e-10;31!UBERON:0000383;6.09e-10;31!UBERON:0001443;2.32e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,1.23e-66,1;UBERON:0003831,1.23e-66,1;UBERON:0003898,1.23e-66,1;UBERON:0004830,1.23e-66,1;UBERON:0003830,1.23e-66,1;UBERON:0005175,1.23e-66,1;UBERON:0001774,1.23e-66,1;UBERON:0001103,1.23e-66,1;UBERON:0010084,1.23e-66,1;UBERON:0005090,3.61e-34,2;UBERON:0001630,3.61e-34,2;UBERON:0000341,7.05e-34,2;UBERON:0000974,6.56e-08,10;UBERON:0001443,2.32e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40773294189637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.669514372325618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95059333026869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0661699095049,0,0,0,0,0,0.202117188958219,0.435433495793923,0.684466602170562,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p4@RPUSD4 | |||
}} |
Revision as of 11:07, 11 January 2014
Short description: | p4@RPUSD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_4_at_RPUSD4_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 26bp_to_uc010sbl.1_5end |
EntrezGene: | RPUSD4 |
HGNC: | 25898 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chest muscle | 1.23e-66 | 1 |
respiratory system muscle | 1.23e-66 | 1 |
skeletal muscle of trunk | 1.23e-66 | 1 |
respiratory system skeletal muscle | 1.23e-66 | 1 |
thoracic segment muscle | 1.23e-66 | 1 |
chest organ | 1.23e-66 | 1 |
muscle of trunk | 1.23e-66 | 1 |
diaphragm | 1.23e-66 | 1 |
future diaphragm | 1.23e-66 | 1 |
muscle structure | 3.61e-34 | 2 |
muscle organ | 3.61e-34 | 2 |
throat | 7.05e-34 | 2 |
neck | 6.56e-08 | 10 |
chest | 2.32e-07 | 11 |