FFCP PHASE1:Hg19::chr12:21810726..21810755,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3945 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6541 | |||
|TSSclassifier=strong | |||
|UniProt=P07195,Q5U077 | |||
|association_with_transcript=0bp_to_ENST00000396076,NM_001174097,uc001rfd.2_5end | |||
|description=CAGE_peak_2_at_LDHB_5end | |||
|id=chr12:21810726..21810755,- | |||
|ontology_enrichment_celltype=CL:0000325!1.62e-08!39 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!6.15e-10!239;DOID:162!2.40e-09!235;DOID:2531!1.28e-08!51;DOID:0060083!1.28e-08!51;DOID:1240!2.43e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,6.07e-10,239;DOID:162,2.37e-09,235;DOID:2531,1.28e-08,51;DOID:0060083,1.28e-08,51;DOID:1240,2.43e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.57e-07!94;UBERON:0001016!2.57e-07!94;UBERON:0001737!4.31e-07!9;UBERON:0005743!5.13e-07!86;UBERON:0001017!8.18e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.29e-07;9!UBERON:0001557;4.29e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.88e-07,89;UBERON:0001737,4.31e-07,9;UBERON:0001017,5.62e-07,81 | |||
|phase1_expression=190.762298234084,303.166341829632,303.756740826818,229.167853228669,382.598696829758,246.871802320404,656.046684455924,247.002470509891,207.120203162472,59.4676126333651,13.9560233594486,22.0625785851474,15.8260186937072,171.911464261505,110.023928741668,224.556598914893,202.505361416056,178.195662054519,165.409218789982,80.0286877499121,21.0120711981581,14.7323719094701,311.710989985721,271.558859344602,212.418146194406,173.534844453597,189.652361629375,205.513850010017,14.5544782434094,23.0297638858328,10.217864138861,348.460644077513,86.747304608136,69.1439999011893,234.105880153672,373.052066046994,212.273117639095,12.1878989877013,10.4283112684474,11.0675544065084,60.6810935190195,61.2159028775871,46.6211777417878,3.34415949192999,3.02300754951048,4.85168122375632,4.88100977501938,6.98985409637104,4.02618282163635,6.90461741573161,11.0149103807513,8.0403958162119,5.5159308917859,5.80936215225443,4.06279459783025,5.27078550719293,4.91231070104122,5.16864014223695,5.50951006267625,9.9487998393589,10.2293940127847,7.58657990429447,8.97586459297343,7.6720455095885,5.80418477257168,6.24123747160254,3.11411124497787,9.2962006144995,9.38669253156363,6.73285418585862,17.5565855763677,8.10210799172642,6.96217252369946,21.3367839175061,22.3234514963296,27.6749412071056,21.0054540243946,26.2809562472636,18.8048936435584,13.1105862120974,14.7198341127327,16.0744455312878,63.3586480060762,50.2447522361161,54.2600644856768,61.0224218270105,50.0494983795016,57.4752439954483,53.5446346955738,49.6107952358389,9.10740750575117,8.80855784056408,12.6150165281326,107.058776149011,80.1527245063597,218.608790363314,70.6188074708661,55.4145175476322,78.1285696198135,289.734196512045,257.152668373903,290.223504915391,290.291825327788,281.534224548834,187.074751246522,233.939792680304,202.019682368702,154.093857629987,145.016172529264,297.303731523446,378.599524366612,509.763627807957,274.18185528665,264.330338152637,283.291269511487,323.951410772342,240.279249488405,291.39607376927,271.490129536927,298.814358636003,291.685387327675,319.351886934654,285.189275533302,305.376054214442,319.822659974005,227.779716466344,209.387639214867,43.3454497933175,21.3952156626806,38.3784670289417,180.417081072332,296.449779989007,192.433155574513,165.177692639747,125.334477658972,160.779636046514,136.789182892789,39.9040593648161,312.815709995901,244.789254798671,228.98528630198,151.477300813105,20.7648314326749,50.7974686614668,57.1203412832243,49.1045859183934,64.6175688121685,45.5517092423203,69.7833791151756,53.4898801914574,112.300760162188,110.110028173584,126.012002083557,123.237131339434,135.07881845959,180.477435512684,103.870498368795,128.691546066326,133.05658224483,91.378727284755,60.0215682492629,57.0204079288884,17.32840608592,165.816049235987,107.748879068274,285.491231324203,166.825323861244,145.719255745419,133.385474595318,93.0280346376766,130.43964167845,1.31780417436063,7.75560528296651,34.4514301192602,72.5579049475165,223.376222576319,220.196467692383,202.219817627914,143.286026408136,192.873094448954,104.614015815111,125.553782144334,169.610014292873,149.798267341493,227.865892940161,66.7486255914148,207.4233328128,29.0558575473908,295.615592758314,185.403342001946,189.20202957858,242.032501704799,273.241530093406,324.300912675492,193.538154349639,253.898533883424,88.3435429052795,83.1602000097437,93.4668992672945,29.1251635820168,9.3420358436111,352.495822619815,205.194372590021,129.388941931113,120.27986812135,128.11189864399,86.3868838712932,306.153462348897,175.443063703707,92.4703493584397,153.438696439523,179.154384362388,137.265968945601,178.802534791667,121.348190328197,141.603342750422,121.309071425692,215.073575655986,118.007970059428,123.982525580029,135.968673933863,138.131126670095,211.442058611178,139.147814277574,150.28311244555,135.37176902361,299.079527429768,410.44469249164,390.179260155843,214.993028101878,356.529362287263,529.217170659953,90.7407287512932,147.302174846171,77.3555559573891,124.45060471257,161.701003893987,504.341888569855,473.891563809544,492.385534051954,489.594944959097,454.278640932667,490.201099083526,539.864557873298,553.540753118601,566.347815025087,28.7880627303613,11.2193419042757,26.3407367252096,22.0513067078313,3.80265104465493,4.91413608338813,27.1763357073446,278.12175263123,440.298609984347,317.572016862571,182.624474919953,79.8052448129099,182.057969037463,259.247646443883,35.5131052788254,22.8785652761507,321.858892716359,231.860809950154,237.987423216011,72.0388574327758,87.5042618769794,78.9554731773583,0,0,62.7853365522863,82.6035055941509,70.8970644117234,298.073592077951,91.0463134837819,256.04582561975,89.5585227028483,223.788132655751,95.0789044329724,268.994127891185,227.429105056163,23.8427332871888,29.6887104038941,18.4313952802515,320.283378809701,126.43816885979,154.727030317262,88.9576719318067,321.335914697886,396.152493296127,360.427131547159,84.2104443433659,92.4235345926554,382.752513699538,184.341466670591,46.4953379607447,242.6018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| |||
|short_description=p2@LDHB | |||
}} |
Revision as of 12:36, 11 January 2014
Short description: | p2@LDHB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LDHB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000396076, NM_001174097, uc001rfd.2_5end |
EntrezGene: | LDHB |
HGNC: | 6541 |
UniProt: | P07195Q5U077 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 2.88e-07 | 89 |
larynx | 4.31e-07 | 9 |
central nervous system | 5.62e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 6.07e-10 | 239 |
cancer | 2.37e-09 | 235 |
hematologic cancer | 1.28e-08 | 51 |
immune system cancer | 1.28e-08 | 51 |
leukemia | 2.43e-07 | 39 |