FFCP PHASE1:Hg19::chr12:78359973..78359982,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89795 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15998 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-73bp_to_ENST00000547725,ENST00000550503_5end | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_34_at_NAV3_5end | |||
|id=chr12:78359973..78359982,+ | |||
|ontology_enrichment_celltype=CL:0002605!1.78e-14!3;CL:0000243!2.47e-09!15;CL:0000125!2.47e-09!15;CL:0000030!2.47e-09!15;CL:0000339!2.47e-09!15;CL:0000095!2.75e-08!17;CL:0000123!2.75e-08!17;CL:0002586!1.18e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002174;3.99e-50;1!CL:0000222;3.99e-50;1!CL:0000501;3.99e-50;1!CL:0000174;9.45e-18;3!CL:0002537;3.26e-11;5!CL:0000163;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002174,2.42e-50,1;CL:0000501,2.42e-50,1;CL:0000174,8.00e-18,3;CL:0002537,3.60e-11,5;CL:0000163,7.91e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0003056;6.76e-18;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000966!1.03e-09!5;UBERON:0005388!1.03e-09!5;UBERON:0001802!1.03e-09!5;UBERON:0002298!3.82e-09!8;UBERON:0000073!9.74e-09!94;UBERON:0001016!9.74e-09!94;UBERON:0005743!1.36e-08!86;UBERON:0001781!1.18e-07!3;UBERON:0001782!1.18e-07!3;UBERON:0005424!1.18e-07!3;UBERON:0003076!2.47e-07!15;UBERON:0003057!2.47e-07!15;UBERON:0001896!5.90e-07!3;UBERON:0005290!5.90e-07!3;UBERON:0010096!5.90e-07!3;UBERON:0000988!7.76e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;2.66e-11;5!UBERON:0005388;2.66e-11;5!UBERON:0001802;2.66e-11;5!UBERON:0000305;2.18e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,1.22e-09,6;UBERON:0005388,1.22e-09,6;UBERON:0001802,1.22e-09,6;UBERON:0000305,2.35e-08,7;UBERON:0004871,1.80e-07,8 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0.276149695926898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571652865261156,0,0,0,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.512556597022804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0.650756789328606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0,0,1.28929632425987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,3.07349139959622,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p34@NAV3 | |||
}} |
Revision as of 14:50, 11 January 2014
Short description: | p34@NAV3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_34_at_NAV3_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | -73bp_to_ENST00000547725, ENST00000550503_5end |
EntrezGene: | NAV3 |
HGNC: | 15998 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
follicular cell of ovary | 2.42e-50 | 1 |
granulosa cell | 2.42e-50 | 1 |
steroid hormone secreting cell | 8.00e-18 | 3 |
amnion mesenchymal stem cell | 3.60e-11 | 5 |
endocrine cell | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
retina | 1.22e-09 | 6 |
photoreceptor array | 1.22e-09 | 6 |
posterior segment of eyeball | 1.22e-09 | 6 |
amnion | 2.35e-08 | 7 |
somatic layer of lateral plate mesoderm | 1.80e-07 | 8 |