FFCP PHASE1:Hg19::chr12:122712038..122712049,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56616 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21528 | |||
|TSSclassifier=strong | |||
|UniProt=Q6W3F3,Q9NR28 | |||
|association_with_transcript=18bp_to_ENST00000413918,NM_019887,NM_138929,NR_024600,NR_024601,uc010taa.1,uc010tab.1,uc010tac.1,uc010tad.1_5end | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_8_at_DIABLO_5end | |||
|id=chr12:122712038..122712049,- | |||
|ontology_enrichment_celltype=CL:0000242!2.31e-14!2;CL:0000791!7.41e-09!18;CL:0000789!7.41e-09!18;CL:0002420!7.41e-09!18;CL:0002419!7.41e-09!18;CL:0000790!7.41e-09!18 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.44e-32;5!CL:0000771;4.66e-21;2!CL:0002321;1.27e-11;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,4.66e-21,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:169!7.52e-11!6 | |||
|ontology_enrichment_disease_v019=DOID:169;2.38e-27;6!DOID:171;6.93e-17;10!DOID:3095;3.04e-08;22!DOID:2994;3.04e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,2.38e-27,6;DOID:171,6.93e-17,10;DOID:3095,3.04e-08,22;DOID:2994,3.04e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000013!6.35e-13!5;UBERON:0002410!6.35e-13!5;UBERON:0000010!2.24e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.44e-32;5!UBERON:0002410;1.44e-32;5!UBERON:0000010;1.24e-18;8!UBERON:0002114;2.09e-14;2!UBERON:0001052;2.80e-11;4!UBERON:0000160;8.11e-10;17!UBERON:0004907;2.74e-09;5!UBERON:0002108;3.49e-09;4!UBERON:0005409;6.75e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.44e-32,5;UBERON:0002410,1.44e-32,5;UBERON:0000010,1.24e-18,8;UBERON:0002114,2.09e-14,2;UBERON:0001052,2.80e-11,4;UBERON:0000160,8.11e-10,17;UBERON:0004907,2.74e-09,5;UBERON:0002108,3.49e-09,4;UBERON:0005409,4.28e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0.221533894583621,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0.506039384039006,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639471856518258,11.4294300080483,0,2.29340240203229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795664888465099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,4.56579360254748,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@DIABLO | |||
}} |
Revision as of 16:26, 11 January 2014
Short description: | p8@DIABLO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_DIABLO_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | 18bp_to_ENST00000413918, NM_019887, NM_138929, NR_024600, NR_024601, uc010taa.1, uc010tab.1, uc010tac.1, uc010tad.1_5end |
EntrezGene: | DIABLO |
HGNC: | 21528 |
UniProt: | Q6W3F3Q9NR28 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 4.66e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.44e-32 | 5 |
autonomic nervous system | 1.44e-32 | 5 |
peripheral nervous system | 1.24e-18 | 8 |
duodenum | 2.09e-14 | 2 |
rectum | 2.80e-11 | 4 |
intestine | 8.11e-10 | 17 |
lower digestive tract | 2.74e-09 | 5 |
small intestine | 3.49e-09 | 4 |
gastrointestinal system | 4.28e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.38e-27 | 6 |
neuroectodermal tumor | 6.93e-17 | 10 |
germ cell and embryonal cancer | 3.04e-08 | 22 |
germ cell cancer | 3.04e-08 | 22 |