FFCP PHASE1:Hg19::chr13:73636621..73636647,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=688 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6349 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-58bp_to_ENST00000464404_5end | |||
|coexpression_cluster_id=C1709 | |||
|description=CAGE_peak_4_at_KLF5_5end | |||
|id=chr13:73636621..73636647,+ | |||
|ontology_enrichment_celltype=CL:0002076!3.32e-13!43;CL:0000066!7.79e-13!254;CL:0000223!4.37e-12!59;CL:0002251!5.34e-09!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;6.82e-13;42!CL:0002251;8.98e-11;20!CL:0002541;8.15e-09;3!CL:0002231;1.03e-08;3!CL:0002623;1.40e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.27e-16,42;CL:0000223,1.03e-14,58;CL:0002251,1.56e-10,20;CL:0002541,7.72e-09,3;CL:0002231,8.13e-09,3;CL:0002623,1.71e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000223;2.47e-08;58 | |||
|ontology_enrichment_disease=DOID:305!2.36e-13!106;DOID:0050687!3.63e-11!143;DOID:1749!8.33e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.23e-15!169;UBERON:0000925!1.23e-15!169;UBERON:0006595!1.23e-15!169;UBERON:0001007!2.46e-13!155;UBERON:0001555!2.46e-13!155;UBERON:0007026!2.46e-13!155;UBERON:0004921!2.60e-12!129;UBERON:0004185!2.60e-12!129;UBERON:0000161!2.23e-09!35;UBERON:0000077!1.82e-08!130;UBERON:0001004!7.46e-08!72;UBERON:0005156!1.03e-07!59;UBERON:0000990!1.03e-07!59;UBERON:0001046!1.39e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.62e-11;33!UBERON:0005409;6.03e-11;22!UBERON:0000974;2.41e-10;6!UBERON:0000160;1.06e-09;17!UBERON:0003124;8.15e-09;3!UBERON:0000920;8.15e-09;3!UBERON:0002108;4.70e-08;4!UBERON:0001555;6.42e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.51e-11,145;UBERON:0001555,1.51e-11,145;UBERON:0007026,1.51e-11,145;UBERON:0004119,2.51e-11,160;UBERON:0000925,2.51e-11,160;UBERON:0006595,2.51e-11,160;UBERON:0000160,4.29e-10,17;UBERON:0005409,1.18e-09,25;UBERON:0004921,4.51e-09,118;UBERON:0000920,7.72e-09,3;UBERON:0002108,1.88e-08,4;UBERON:0000161,1.44e-07,36 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0.30120591877825,1.47901604066715,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0.256160706529101,0.236482229888585,2.06847408441971,1.29096936716765,0,0,0,0.224723484445085,0,0.641858054152187,0,0,0.199463657621632,0.426224750532694,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0.205601498999509,0.334372990781356,0,0,0,0,0,0.443067789167242,0,0,0.130059347559878,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.261958150995425,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0.735326160691737,0,0,0,0,0,0,0,1.31780417436063,0,0.872188104285069,0.496971951695318,0,0,0.286836620748814,0,0.560677600142307,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0,0,0,0,0,0.161646056818812,0.355009592516614,0.201504196455281,0,0.386521706326594,0.272746120590835,0.286804595389004,0.121973706129595,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0.337169380156203,0.723033089650446,0.661763836394364,0,0,0.269662616320329,0,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,2.33678033231916,0,2.19500570817251,0,0.603173834469785,1.38882667737794,0,0,0,0.115930404975077,0.117408694235822,0,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.895585227028483,1.74380363108377,0,0,0.088048434013226,0.207328115540772,0.432359860250884,0.50496973370552,0.126995788584338,0.381988425558278,0,0,0.308482478109971,0.300343057843917,0,0,0,0,0,0,0,0.26593811658487,2.08014873822732,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0,0,0,0,0.76228387266739,0,0,0,0,0.749007023947182,2.99161459204025,4.97298616123243,0.12269149171914,0.500170521059677,0,0,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0,0.215714200818617,0,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0,0,0,0,4.47179963489002,1.60405176242628,6.44566922551274,0.114814448164607,0,0.393373244878272,0,0.385076685522074,0.784349769176855,0,0.316654886678627,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,1.30151357865721,0.206082023295445,0,0,0.574265537996172,0.650060246036521,0,0.676695028044854,0,0.15350367472613,0,0.107420244868274,0,0.170453254832202,0.801288320820636,3.47098322258054,0.576570202095319,0.382838137483752,0.6069466851333,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0,0,0.42793898803392,0,0.78494864019923,0,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.673554789078584,0,1.08890984861323,0.470719003883896,0.43050537267123,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,3.84991942105343,1.22520107990516,0,0,0,0.159426272728822,0,0,0,0,0,0,0.156679895773023,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,0.23874448473769,0.593929361665277,0.307160702099232,0,0,0,0,0.422250816255987,0.398495976502139,0.828851746593443,0,0.20453736500431,0,0,0.629078458031288,1.25314822272926,0,0.887790650732402,2.3948309234694,0,0.969332746095218,0,0,0.260427761085233,0,0,0.455173793141999,0,0.236387681767936,0,0,0.173624994933292,0.885741385813839,0.361789315876224,0,0,0,0,0.21787692703798,4.60098356119391,1.53900517007594,0.455768223388005,0.922255617552241,0.987334088507493,1.19512109114209,2.55200927785536,2.38153742844842,4.26427820814908,0,0,0,0,0,0,0,0,0.210998064528027,0.979396848954886,0.424059214301822,0,1.99052386215701,3.71521770914025,10.3875124638716,0,0,0.104421949505455,0,0.802577647298789,0,0,0.586993856796269,0,0.394584402849391,0,0,0.126373159256976,0.60129367765797,0,0,0,0,0,1.13843818411917,0.277349346026277,1.04135843001079,1.66587075604442,0.34823682632161,1.04836000945218,0.171986032471617,1.06431964417994,1.31560770755134,0.656923656425674,2.03676934625681,0,0.225980740780532,0.137041924646751,0,0.0633107959558787,2.93327074102205,0,1.92107695265417,0.39961921916426,1.15272333723285,0.114536596165916,0,1.4405479798815,0,0.942776138467182,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,1.39775300349294,0,0,0.0671834724867263,0,0,0.0787831823072236,0,0,0.393709926058995,0,0,0,0.160753148465019,0,0,0.2249738915515,0,0,5.03152031398899,0.236417121897595,0.0524545881349981,0.211200673038813,0,0.383830394638891,1.42939065274673,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0.342173675768659,0,0.213574825135389,2.35806457649499,0.828478110694391,0,0,0,0,0,0,0,0,2.35581144375351,0,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0.138348634936231,0,0.606596470166591,1.71279200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| |||
|short_description=p4@KLF5 | |||
}} |
Revision as of 18:01, 11 January 2014
Short description: | p4@KLF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KLF5_5end |
Coexpression cluster: | C1709_salivary_signet_Prostate_cervical_keratoacanthoma_rectal_tubular |
Association with transcript: | -58bp_to_ENST00000464404_5end |
EntrezGene: | KLF5 |
HGNC: | 6349 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 4.27e-16 | 42 |
endodermal cell | 1.03e-14 | 58 |
epithelial cell of alimentary canal | 1.56e-10 | 20 |
chorionic membrane mesenchymal stem cell | 7.72e-09 | 3 |
epithelial cell of prostate | 8.13e-09 | 3 |
acinar cell of salivary gland | 1.71e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
digestive system | 1.51e-11 | 145 |
digestive tract | 1.51e-11 | 145 |
primitive gut | 1.51e-11 | 145 |
endoderm-derived structure | 2.51e-11 | 160 |
endoderm | 2.51e-11 | 160 |
presumptive endoderm | 2.51e-11 | 160 |
intestine | 4.29e-10 | 17 |
gastrointestinal system | 1.18e-09 | 25 |
subdivision of digestive tract | 4.51e-09 | 118 |
egg chorion | 7.72e-09 | 3 |
small intestine | 1.88e-08 | 4 |
orifice | 1.44e-07 | 36 |