FFCP PHASE1:Hg19::chr13:101090885..101090903,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C42 | |||
|description=CAGE_peak_at_chr13:101090885..101090903,+ | |||
|id=chr13:101090885..101090903,+ | |||
|ontology_enrichment_celltype=CL:1000507!4.99e-09!12;CL:1000494!4.99e-09!12;CL:0002541!5.83e-07!3;CL:0000239!6.19e-07!3;CL:1000615!6.19e-07!3;CL:0002306!6.19e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000313;1.71e-19;1!CL:0000159;1.98e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.88e-19,1;CL:0000159,2.07e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;4.28e-19;1!UBERON:0007297;1.72e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;1.71e-19;1!DOID:0050619;2.25e-19;1!DOID:1357;2.25e-19;1!DOID:3371;2.71e-19;1!DOID:4549;2.71e-19;1!DOID:5861;2.71e-19;1!DOID:6496;2.71e-19;1!DOID:1325;1.68e-11;7!DOID:3904;1.68e-11;7!DOID:0050615;6.20e-11;16 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.88e-19,1;DOID:0050619,2.25e-19,1;DOID:1357,2.25e-19,1;DOID:3371,2.71e-19,1;DOID:4549,2.71e-19,1;DOID:5861,2.71e-19,1;DOID:6496,2.71e-19,1;DOID:1325,1.68e-11,7;DOID:3904,1.68e-11,7;DOID:0050615,6.20e-11,16 | |||
|ontology_enrichment_uberon=UBERON:0002791!1.08e-10!33;UBERON:0002020!2.47e-10!34;UBERON:0003528!2.47e-10!34;UBERON:0001893!2.47e-10!34;UBERON:0002113!1.84e-09!27;UBERON:0003918!1.84e-09!27;UBERON:0005095!1.84e-09!27;UBERON:0007687!1.84e-09!27;UBERON:0007023!3.67e-09!115;UBERON:0009773!4.99e-09!12;UBERON:0001231!4.99e-09!12;UBERON:0004810!4.99e-09!12;UBERON:0001869!5.95e-09!32;UBERON:0006555!6.05e-09!17;UBERON:0005103!6.05e-09!17;UBERON:0000083!6.05e-09!17;UBERON:0009201!6.05e-09!17;UBERON:0004819!6.05e-09!17;UBERON:0006553!6.05e-09!17;UBERON:0003074!6.05e-09!17;UBERON:0003060!6.05e-09!17;UBERON:0002021!1.55e-08!5;UBERON:0000080!2.06e-08!18;UBERON:0002120!2.06e-08!18;UBERON:0004875!2.06e-08!18;UBERON:0005721!2.06e-08!18;UBERON:0005754!2.06e-08!18;UBERON:0007297!2.06e-08!18;UBERON:0002780!2.60e-08!41;UBERON:0001890!2.60e-08!41;UBERON:0006240!2.60e-08!41;UBERON:0002619!2.74e-08!22;UBERON:0003080!4.46e-08!42;UBERON:0000489!8.78e-08!32;UBERON:0004876!1.66e-07!20;UBERON:0000956!3.16e-07!25;UBERON:0000203!3.16e-07!25;UBERON:0003887!4.05e-07!21;UBERON:0000476!5.83e-07!3;UBERON:0000920!5.83e-07!3;UBERON:0006853!6.19e-07!3;UBERON:0007685!6.19e-07!3;UBERON:0004134!6.19e-07!3;UBERON:0001950!7.23e-07!20;UBERON:0001049!9.68e-07!57;UBERON:0005068!9.68e-07!57;UBERON:0006241!9.68e-07!57;UBERON:0007135!9.68e-07!57;UBERON:0002771!9.89e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;1.30e-19;1!UBERON:0004911;1.71e-19;1!UBERON:0001764;2.25e-19;1!UBERON:0001825;2.25e-19;1!UBERON:0004909;1.98e-10;2!UBERON:0006947;2.05e-07;3!UBERON:0004054;2.05e-07;3!UBERON:0002418;2.63e-07;3!UBERON:0004755;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.30e-19,1;UBERON:0004911,1.88e-19,1;UBERON:0001764,2.25e-19,1;UBERON:0001825,2.25e-19,1;UBERON:0004909,2.07e-10,2;UBERON:0006947,2.05e-07,3;UBERON:0004054,2.05e-07,3;UBERON:0002418,2.63e-07,3;UBERON:0004755,2.63e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.462092022626489,0,0,0.105551628892876,0,0,0,0,0,0,0.764628819135115,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569134746787313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,11.110221043093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,0,0,10.4836000945218,0,0,0,0,0,2.11814704059601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,1.89133697518076,0.524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14108192500469,0,0,0.3755727921195,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,1.41696576325585,0.159633859057151,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41923792260222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,4.80978356730507,0,0,0,0,1.1598144313382,0,0,4.97376937903421,0,24.7351919665322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr13:101090885..101090903,+ | |||
}} |
Revision as of 18:29, 11 January 2014
Short description: | p@chr13:101090885..101090903, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:101090885..101090903, + |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.88e-19 | 1 |
seromucus secreting cell | 2.07e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
epididymis | 1.30e-19 | 1 |
epithelium of female gonad | 1.88e-19 | 1 |
maxillary sinus | 2.25e-19 | 1 |
paranasal sinus | 2.25e-19 | 1 |
epithelium of gonad | 2.07e-10 | 2 |
male genital duct | 2.05e-07 | 3 |
internal male genitalia | 2.05e-07 | 3 |
cartilage tissue | 2.63e-07 | 3 |
skeletal tissue | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.88e-19 | 1 |
paranasal sinus cancer | 2.25e-19 | 1 |
maxillary sinus cancer | 2.25e-19 | 1 |
chondrosarcoma | 2.71e-19 | 1 |
extraosseous chondrosarcoma | 2.71e-19 | 1 |
myxoid chondrosarcoma | 2.71e-19 | 1 |
extraskeletal myxoid chondrosarcoma | 2.71e-19 | 1 |
bronchus cancer | 1.68e-11 | 7 |
bronchogenic carcinoma | 1.68e-11 | 7 |
respiratory system cancer | 6.20e-11 | 16 |