FFCP PHASE1:Hg19::chr14:55494323..55494330,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=122809 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19392 | |||
|TSSclassifier=strong | |||
|UniProt=Q8WXH5 | |||
|association_with_transcript=-14bp_to_ENST00000339298_5end | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_20_at_SOCS4_5end | |||
|id=chr14:55494323..55494330,+ | |||
|ontology_enrichment_celltype=CL:0002322!6.95e-23!5;CL:0000039!5.98e-17!7;CL:0000586!5.98e-17!7;CL:0000313!5.07e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000039;4.97e-90;7!CL:0000586;4.97e-90;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.43e-90,7;CL:0000586,4.43e-90,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.34e-63;10!UBERON:0005564;2.34e-63;10 | |||
|ontology_enrichment_disease=DOID:3095!2.58e-11!22;DOID:2994!2.58e-11!22;DOID:2152!5.07e-08!1;DOID:305!2.77e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.45e-29;22!DOID:2994;2.45e-29;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.36e-29,22;DOID:2994,2.36e-29,22;DOID:0050687,1.55e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000473!7.49e-15!8;UBERON:0000991!9.91e-12!21;UBERON:0009196!9.91e-12!21;UBERON:0009117!9.91e-12!21;UBERON:0005564!9.91e-12!21;UBERON:0004176!3.58e-11!22;UBERON:0003135!7.75e-11!11;UBERON:0004911!5.07e-08!1;UBERON:0002902!7.16e-08!1;UBERON:0009899!7.16e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.40e-79;8!UBERON:0003135;1.07e-57;11!UBERON:0000991;1.08e-30;21!UBERON:0003101;2.45e-29;22!UBERON:0000079;2.45e-29;22!UBERON:0002323;9.38e-14;45!UBERON:0003133;2.66e-11;44!UBERON:0000922;6.43e-11;49!UBERON:0002553;5.46e-09;52!UBERON:0004458;7.98e-08;48!UBERON:0005156;2.01e-07;59!UBERON:0000990;2.01e-07;59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.79e-79,8;UBERON:0003135,9.98e-58,11;UBERON:0000991,1.04e-30,21;UBERON:0009196,1.04e-30,21;UBERON:0009117,1.04e-30,21;UBERON:0005564,1.04e-30,21;UBERON:0004176,2.36e-29,22;UBERON:0003101,2.36e-29,22;UBERON:0000079,2.36e-29,22;UBERON:0002323,1.83e-14,46;UBERON:0003133,6.82e-14,48;UBERON:0004458,1.27e-13,49;UBERON:0003886,1.98e-12,54;UBERON:0005156,1.96e-11,59;UBERON:0000990,1.96e-11,59;UBERON:0002553,4.41e-11,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.662648841607426,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0.275078873194468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04617282831313,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.874124575709564,0,1.32585478664576,2.93939145792117,1.65410819162721,1.0028301571695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p20@SOCS4 | |||
}} |
Revision as of 20:13, 11 January 2014
Short description: | p20@SOCS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_SOCS4_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | -14bp_to_ENST00000339298_5end |
EntrezGene: | SOCS4 |
HGNC: | 19392 |
UniProt: | Q8WXH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.43e-90 | 7 |
germ cell | 4.43e-90 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 5.79e-79 | 8 |
male reproductive organ | 9.98e-58 | 11 |
gonad | 1.04e-30 | 21 |
indifferent external genitalia | 1.04e-30 | 21 |
indifferent gonad | 1.04e-30 | 21 |
gonad primordium | 1.04e-30 | 21 |
external genitalia | 2.36e-29 | 22 |
male organism | 2.36e-29 | 22 |
male reproductive system | 2.36e-29 | 22 |
body cavity | 1.83e-14 | 46 |
reproductive organ | 6.82e-14 | 48 |
body cavity or lining | 1.27e-13 | 49 |
body cavity precursor | 1.98e-12 | 54 |
reproductive structure | 1.96e-11 | 59 |
reproductive system | 1.96e-11 | 59 |
anatomical cavity | 4.41e-11 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.36e-29 | 22 |
germ cell cancer | 2.36e-29 | 22 |
cell type cancer | 1.55e-07 | 143 |