FFCP PHASE1:Hg19::chr14:85996451..85996468,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23768 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3761 | |||
|TSSclassifier=strong | |||
|UniProt=O43155,B3KPR2 | |||
|association_with_transcript=-19bp_to_ENST00000330753,NM_013231,uc001xvr.2_5end | |||
|coexpression_cluster_id=C2318 | |||
|description=CAGE_peak_2_at_FLRT2_5end | |||
|id=chr14:85996451..85996468,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.93e-14!75;CL:0000055!2.35e-13!180;CL:0000220!2.79e-08!246;CL:0002139!3.66e-08!24;CL:0000222!4.55e-08!119;CL:0002321!5.45e-08!248;CL:0000213!6.36e-07!57;CL:0000215!6.36e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.51e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.23e-14,76;CL:0002139,4.35e-08,24;CL:0000115,7.32e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!9.18e-16!173;UBERON:0006601!9.18e-16!173;UBERON:0000475!1.50e-15!365;UBERON:0000468!6.98e-15!659;UBERON:0004121!3.09e-14!169;UBERON:0000033!4.78e-14!123;UBERON:0000119!6.41e-14!312;UBERON:0000153!1.97e-13!129;UBERON:0007811!1.97e-13!129;UBERON:0000483!3.42e-13!309;UBERON:0000477!1.50e-11!286;UBERON:0001950!3.85e-11!20;UBERON:0002049!3.90e-11!79;UBERON:0007798!3.90e-11!79;UBERON:0002619!4.01e-11!22;UBERON:0001869!2.17e-10!32;UBERON:0000467!2.30e-10!625;UBERON:0000480!3.65e-10!626;UBERON:0000481!3.95e-10!347;UBERON:0003102!5.46e-10!95;UBERON:0001893!6.48e-10!34;UBERON:0004111!8.03e-10!241;UBERON:0002791!1.68e-09!33;UBERON:0002020!3.85e-09!34;UBERON:0003528!3.85e-09!34;UBERON:0000956!6.45e-09!25;UBERON:0000203!6.45e-09!25;UBERON:0002346!7.41e-09!90;UBERON:0003056!7.65e-09!61;UBERON:0000055!2.04e-08!69;UBERON:0004535!4.42e-08!110;UBERON:0000922!5.90e-08!612;UBERON:0002097!6.13e-08!40;UBERON:0001444!8.87e-08!48;UBERON:0005743!9.99e-08!86;UBERON:0002050!1.03e-07!605;UBERON:0005423!1.03e-07!605;UBERON:0000923!1.31e-07!604;UBERON:0005291!1.31e-07!604;UBERON:0006598!1.31e-07!604;UBERON:0002532!1.31e-07!604;UBERON:0001009!1.41e-07!113;UBERON:0004872!1.76e-07!84;UBERON:0003075!1.79e-07!86;UBERON:0007284!1.79e-07!86;UBERON:0000486!3.58e-07!82;UBERON:0000914!4.24e-07!83;UBERON:0002329!4.24e-07!83;UBERON:0003077!4.24e-07!83;UBERON:0003059!4.24e-07!83;UBERON:0007282!4.24e-07!83;UBERON:0009618!4.24e-07!83;UBERON:0007285!4.24e-07!83;UBERON:0000073!7.86e-07!94;UBERON:0001016!7.86e-07!94;UBERON:0002199!9.88e-07!45;UBERON:0002416!9.88e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.61e-12;22!UBERON:0001950;2.80e-12;20!UBERON:0001869;4.84e-10;32!UBERON:0000956;9.42e-10;25!UBERON:0000203;9.42e-10;25!UBERON:0002791;3.57e-09;32!UBERON:0001893;1.50e-08;34!UBERON:0003528;4.49e-08;34!UBERON:0002020;4.49e-08;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.42e-12,20;UBERON:0002619,1.49e-12,22;UBERON:0004121,1.89e-12,171;UBERON:0000924,1.89e-12,171;UBERON:0006601,1.89e-12,171;UBERON:0001869,2.38e-11,32;UBERON:0010314,3.89e-11,132;UBERON:0002791,3.41e-10,32;UBERON:0001893,4.95e-10,34;UBERON:0000956,5.89e-10,25;UBERON:0000203,5.89e-10,25;UBERON:0000119,1.31e-09,309;UBERON:0003102,5.50e-09,99;UBERON:0003528,5.51e-09,34;UBERON:0002020,5.51e-09,34;UBERON:0000483,5.74e-09,306;UBERON:0003056,1.27e-08,61;UBERON:0002049,2.61e-08,78;UBERON:0007798,2.61e-08,78;UBERON:0010371,4.40e-08,104;UBERON:0000033,1.51e-07,56;UBERON:0002097,2.50e-07,41;UBERON:0000153,3.67e-07,62;UBERON:0007811,3.67e-07,62;UBERON:0001444,3.96e-07,49;UBERON:0004535,4.27e-07,109 | |||
|phase1_expression=1.45342703416445,1.07050261945492,1.69145284915165,0,0.893922188854576,1.74467704820074,0,0.631719873426831,0,0,0,0.218441372130172,0,0.37129905888014,0.662794751455832,2.01697543935533,1.20538905604795,4.38186054232424,1.95173119516203,0.369363174230364,0.204000691244253,0.626909442956176,0.572471974262113,0,0,0,0,0,0,0,0,1.83884244895785,2.71085326900425,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0.242584061187816,0,0.411167888021826,0,0,0,0,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0.449446968890169,0,0,0,0,0,0,0,0,0,0.502497330513487,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.68280343881454,3.58015173161885,2.89151321907653,0.50133791063589,3.0417768981773,6.36228757640879,4.37971383272372,1.41802225746102,1.33037638477538,0.527008714158756,1.83370705696798,1.09288586487763,1.11235332835329,0,0,0.132957960518865,0,0,0,1.78886166630035,3.4409383804245,3.12426451446835,2.82653970962005,1.67799774483962,0.825354125820202,1.25396979922086,7.75250277507987,15.2979492955285,11.0457802212341,4.02829317109147,3.80136052859256,8.7862340717341,2.94130464276695,3.24056779152704,4.01848777278359,2.02076435363553,2.13961812918312,3.06633274931766,0.949265659568129,1.28241220751285,0,0,0.872188104285069,1.49091585508596,2.27934920996244,2.25095607382472,8.60509862246441,3.19201543978521,3.92474320099615,1.06748995729705,2.22000793575444,3.11211035399766,3.23305612967251,1.63461903113459,9.83823279692054,4.03323147135999,5.62371436401112,0.624320153660641,1.1409436430889,1.34503812496621,2.81842796745036,2.91371299862637,1.12360645361799,1.83738754129404,1.35117749042945,5.3729406211398,7.12801714369232,8.90160945402805,2.73048408581408,2.15585442544872,2.18836948140286,1.7516592782075,2.21651292387346,1.31693286264251,2.45190236639216,6.00952235626387,0.907457465280168,5.74046834204358,2.13557388818567,1.05965950579781,9.90300617078528,3.50378599410692,5.15281080091258,4.46680455195816,9.78902726999344,3.80004320128675,3.28163906517349,2.85354685791128,7.27407255684654,7.4552014428489,4.23158812556089,0.847802961552438,5.21804303540901,3.54569956768085,4.30206893083506,0.121973706129595,0,0.580969714347592,0.621966330092223,0.252320850875628,0,6.25798129319264,6.43240938192885,4.14404764057442,4.17931135228781,2.16563844500876,0,0,0,0,0,0,0,0,0,5.90524363699719,0,2.057870056657,1.47008711385542,0,0,0.590789906681404,0,0,4.97546649865724,4.49976170175365,2.24803506515239,3.41798506199545,2.87024179991442,7.81939932744779,2.07986957055916,1.44331342025273,1.85488647960123,6.22266079449855,8.8063533134255,7.87075371380238,9.13219930726072,0,0,0.492434012174795,0.936017060556951,0.743155811443641,2.81201501960331,7.72717789714754,2.26840155587818,3.58234090811393,1.74380363108377,0.766765358330422,0,0,0,0.288239906833923,0.25248486685276,0.317489471460845,1.90994212779139,0,0,0.411309970813294,4.80548892550268,0,4.26098120512371,4.79556075716608,2.0534720029866,4.26596662000667,7.15312891703765,0.845302752556,1.86156681609409,4.16029747645464,0.257207374262142,0,0,0.428933980974443,5.96883765930587,1.64648067356154,0.325736184293735,0.710783897485092,0,6.93310567237048,1.74306691720059,4.59875759437462,0,0,0,4.0736225433569,8.04033550838797,0,1.73737568001095,0.821905290201534,2.86497541183833,0,0,0,0,0.254094624222463,5.20559415430487,0.773288812777695,2.51274398001523,5.74144876487847,0,0,0,4.04881922673162,1.00034104211935,1.35632511849868,1.87173775377726,2.67643483195743,5.67728694122165,3.98280810975225,0.902838299183157,0,5.17365356462525,1.99267679560631,0.737476674166813,5.5605513259573,4.11182430671755,2.74514739048685,0,0,0,0.303127571446259,0,1.81434175997808,7.44323423456331,14.732349435654,2.52594084989766,4.10045277618243,6.14048698880044,3.21707842287215,2.96836132889982,0.462629081407967,1.77561725313127,1.72467027628999,0.519254429183621,1.39452454151951,0,6.41620704970512,2.11786274552562,0.229628896329213,0.364182336013434,0.393373244878272,0.451199612907412,0.539107359730903,0,0,0.527758144464379,3.4120015221269,1.70093705276516,1.94324324491925,1.54227252690289,0,0.501689773854853,0,0.831076008928724,0,0,0,2.56450125116389,2.62411716559765,7.15832468261467,0.412164046590889,0.0915694648183434,0.247528499761764,4.01985876597321,4.55042172225565,0,6.09025525240368,0.462145851343933,0.614014698904518,0.964856007391714,3.11518710117994,2.75531718437034,1.96021243057032,2.8490251406956,5.95025695299521,4.80475168412765,5.6149593497617,2.4277867405332,0.929691098594572,5.35180989612088,0.6970372701606,3.38836938193698,1.06461206063404,0.869932992075073,1.29726953372744,2.00374841438788,3.72158369359667,4.42931194606216,2.47819252100972,2.04718233049067,2.99557291623744,2.54562598340749,0.78494864019923,5.39617372749944,3.56898138656871,1.53156123049392,0.606547444719948,0,0.421258456238981,0,0.243713489631284,2.11300293513511,0,0,1.1300811662024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| |||
|short_description=p2@FLRT2 | |||
}} |
Revision as of 21:20, 11 January 2014
Short description: | p2@FLRT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FLRT2_5end |
Coexpression cluster: | C2318_extraskeletal_adrenal_Lymphatic_Endothelial_leiomyoblastoma_Preadipocyte_occipital |
Association with transcript: | -19bp_to_ENST00000330753, NM_013231, uc001xvr.2_5end |
EntrezGene: | FLRT2 |
HGNC: | 3761 |
UniProt: | O43155B3KPR2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.23e-14 | 76 |
endothelial cell of vascular tree | 4.35e-08 | 24 |
endothelial cell | 7.32e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
neocortex | 1.42e-12 | 20 |
regional part of cerebral cortex | 1.49e-12 | 22 |
ectoderm-derived structure | 1.89e-12 | 171 |
ectoderm | 1.89e-12 | 171 |
presumptive ectoderm | 1.89e-12 | 171 |
cerebral hemisphere | 2.38e-11 | 32 |
structure with developmental contribution from neural crest | 3.89e-11 | 132 |
regional part of telencephalon | 3.41e-10 | 32 |
telencephalon | 4.95e-10 | 34 |
cerebral cortex | 5.89e-10 | 25 |
pallium | 5.89e-10 | 25 |
cell layer | 1.31e-09 | 309 |
surface structure | 5.50e-09 | 99 |
brain grey matter | 5.51e-09 | 34 |
gray matter | 5.51e-09 | 34 |
epithelium | 5.74e-09 | 306 |
pre-chordal neural plate | 1.27e-08 | 61 |
vasculature | 2.61e-08 | 78 |
vascular system | 2.61e-08 | 78 |
ecto-epithelium | 4.40e-08 | 104 |
head | 1.51e-07 | 56 |
skin of body | 2.50e-07 | 41 |
anterior region of body | 3.67e-07 | 62 |
craniocervical region | 3.67e-07 | 62 |
subdivision of head | 3.96e-07 | 49 |
cardiovascular system | 4.27e-07 | 109 |