FFCP PHASE1:Hg19::chr15:68624258..68624272,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C836 | |||
|description=CAGE_peak_at_chr15:68624258..68624272,- | |||
|id=chr15:68624258..68624272,- | |||
|ontology_enrichment_celltype=CL:0000057!4.96e-18!75;CL:0000055!3.12e-15!180;CL:0002620!3.52e-13!23;CL:0002334!1.15e-07!12;CL:0000136!1.33e-07!15;CL:0002580!2.15e-07!3;CL:0000048!2.15e-07!430;CL:0002579!2.43e-07!3;CL:0002615!4.40e-07!3;CL:0002320!4.67e-07!365;CL:0000723!4.86e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0002580;6.59e-19;3!CL:0002579;7.42e-19;3!CL:0002615;5.32e-18;3!CL:0002334;1.02e-17;12!CL:0000136;1.23e-15;13!CL:0002617;4.97e-13;2!CL:0002620;3.34e-11;23!CL:0002569;3.75e-09;6!CL:0000057;7.41e-09;73!CL:0002568;6.12e-07;1!CL:0002616;6.12e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,6.05e-19,3;CL:0002579,8.65e-19,3;CL:0000136,5.01e-18,15;CL:0002615,5.04e-18,3;CL:0002334,1.05e-17,12;CL:0000057,4.08e-16,76;CL:0002617,5.29e-13,2;CL:0002620,2.28e-11,23;CL:0002569,4.51e-09,6;CL:0000134,8.21e-09,354;CL:0002320,1.59e-08,361;CL:0000219,1.62e-07,386;CL:0002616,4.57e-07,1;CL:0002568,8.67e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0005754;6.12e-07;1 | |||
|ontology_enrichment_disease=DOID:17!2.95e-09!5;DOID:450!2.95e-09!5;DOID:66!2.95e-09!5;DOID:423!2.95e-09!5;DOID:0080000!2.95e-09!5;DOID:11722!2.95e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:2513;6.12e-07;1!DOID:3369;6.12e-07;1!DOID:3571;6.12e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,3.40e-07,1;DOID:2513,3.82e-07,1;DOID:3571,5.45e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!9.08e-13!6;UBERON:0002358!9.08e-13!6;UBERON:0003684!9.08e-13!6;UBERON:0001178!9.08e-13!6;UBERON:0002384!3.62e-08!375;UBERON:0004457!1.13e-07!12;UBERON:0000042!1.13e-07!12;UBERON:0002097!3.65e-07!40;UBERON:0002199!8.05e-07!45;UBERON:0002416!8.05e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;4.70e-35;6!UBERON:0002358;4.70e-35;6!UBERON:0003684;4.70e-35;6!UBERON:0001178;4.70e-35;6!UBERON:0004457;3.29e-23;9!UBERON:0000042;3.29e-23;9!UBERON:0000310;5.58e-15;10!UBERON:0001443;1.35e-13;11!UBERON:0003422;3.75e-09;6!UBERON:0003104;6.58e-08;7!UBERON:0009142;6.58e-08;7!UBERON:0000998;6.12e-07;1!UBERON:0006868;6.12e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.18e-35,6;UBERON:0002358,5.18e-35,6;UBERON:0003684,5.18e-35,6;UBERON:0001178,5.18e-35,6;UBERON:0004457,2.96e-17,12;UBERON:0000042,2.96e-17,12;UBERON:0000310,5.52e-15,10;UBERON:0001443,1.34e-13,11;UBERON:0003422,4.51e-09,6;UBERON:0002384,5.22e-09,371;UBERON:0002097,8.70e-08,41;UBERON:0000998,6.88e-07,1;UBERON:0006868,6.88e-07,1;UBERON:0002199,8.16e-07,46;UBERON:0002416,8.16e-07,46 | |||
|phase1_expression=2.36181893051724,5.1384125733836,1.55049844505568,9.00659685178174,1.34088328328186,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0,0,0.313454721478088,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50668955317945,0.724232594804119,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.25326102332916,0,0.286836620748814,0.354668382198357,0,1.06748995729705,1.2333377420858,0,0.134710672069688,0,0.454072282934794,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.45071417671979,0,1.4351170855109,1.92201649936711,0.211931901159562,0.300091096084402,0.412210116953756,0.772921620136887,1.67505170698431,2.36286865137773,1.26668106709558,0.504867548488229,1.74894807420369,0.323292113637624,1.77504796258307,0.503760491138201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,1.16344544182,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4377491329495,2.29723871668228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,1.10391690523754,0.234282829985426,0.300946099727719,11.3703752027992,0,0.664225598535437,0.368738337083406,0,0.391602314925481,0.343143423810856,0,0,0,0,0,0,3.72161711728165,5.37116906508219,9.82310330515758,2.17836553734692,9.72243773226737,8.36440389946759,0,0,0.177561725313127,0,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.290012154876366,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0.94443704049192,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707027159768564,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.597743964753209,0,0,0,0,1.86623752597084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.569710279235006,0,0,0,0,0.183195186803725,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,1.16856654923612,0,0,0,0,0,0.302461847526478,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0.545545977607678,0,0,0,0.400027764663154,1.03018711554838,0.673498977531838,0,0,0,0,0.453411851024545,0.463044948647668,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,2.6208787907713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.6124909547064,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,1.1441462864015,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679708458751268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p@chr15:68624258..68624272,- | |||
}} |
Revision as of 00:15, 12 January 2014
Short description: | p@chr15:68624258..68624272, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:68624258..68624272, - |
Coexpression cluster: | C836_Preadipocyte_osteoclastoma_Ewing_Fibroblast_Adipocyte_Osteoblast_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 6.05e-19 | 3 |
omentum preadipocyte | 8.65e-19 | 3 |
fat cell | 5.01e-18 | 15 |
adipocyte of omentum tissue | 5.04e-18 | 3 |
preadipocyte | 1.05e-17 | 12 |
fibroblast | 4.08e-16 | 76 |
adipocyte of breast | 5.29e-13 | 2 |
skin fibroblast | 2.28e-11 | 23 |
mesenchymal stem cell of umbilical cord | 4.51e-09 | 6 |
mesenchymal cell | 8.21e-09 | 354 |
connective tissue cell | 1.59e-08 | 361 |
motile cell | 1.62e-07 | 386 |
perirenal adipocyte cell | 4.57e-07 | 1 |
mesenchymal stem cell of Wharton's jelly | 8.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 5.18e-35 | 6 |
peritoneum | 5.18e-35 | 6 |
abdominal cavity | 5.18e-35 | 6 |
visceral peritoneum | 5.18e-35 | 6 |
cavity lining | 2.96e-17 | 12 |
serous membrane | 2.96e-17 | 12 |
breast | 5.52e-15 | 10 |
chest | 1.34e-13 | 11 |
mesenchyme of umbilical cord | 4.51e-09 | 6 |
connective tissue | 5.22e-09 | 371 |
skin of body | 8.70e-08 | 41 |
seminal vesicle | 6.88e-07 | 1 |
seminal fluid secreting gland | 6.88e-07 | 1 |
integument | 8.16e-07 | 46 |
integumental system | 8.16e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 3.40e-07 | 1 |
basal cell carcinoma | 3.82e-07 | 1 |
liver cancer | 5.45e-07 | 1 |