FFCP PHASE1:Hg19::chr16:56685796..56685801,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=4490 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7394 | |||
|TSSclassifier=not | |||
|UniProt=P07438,Q86YX0 | |||
|association_with_transcript=-9bp_to_ENST00000334346,NM_005947,uc002ejs.2_5end | |||
|coexpression_cluster_id=C129 | |||
|description=CAGE_peak_1_at_MT1B_5end | |||
|id=chr16:56685796..56685801,+ | |||
|ontology_enrichment_celltype=CL:0002149!4.68e-07!6;CL:0002255!4.68e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.16e-17;12!CL:0002149;9.74e-16;6!CL:0002255;9.74e-16;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.44e-17,12;CL:0002149,9.74e-16,6;CL:0002255,9.74e-16,6;CL:0000223,1.06e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0005795;7.74e-10;10!UBERON:0004161;5.10e-09;11!UBERON:0009497;9.04e-08;13!UBERON:0001041;2.96e-07;30!CL:0000223;3.07e-07;58 | |||
|ontology_enrichment_disease=DOID:299!2.93e-09!25;DOID:4468!3.37e-09!2;DOID:3001!4.68e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:3001;9.74e-16;6!DOID:4468;3.06e-12;2!DOID:299;1.36e-08;25!DOID:120;5.31e-08;27!DOID:193;1.72e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,9.74e-16,6;DOID:4468,2.59e-12,2;DOID:299,1.30e-08,25;DOID:120,5.12e-08,27;DOID:193,1.67e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0000974!6.54e-10!10;UBERON:0003343!1.45e-09!4;UBERON:0004785!1.45e-09!4;UBERON:0005057!3.67e-09!26;UBERON:0003729!9.82e-08!5;UBERON:0007499!2.46e-07!25;UBERON:0009856!5.16e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.71e-19;19!UBERON:0006925;4.71e-19;19!UBERON:0002423;1.35e-14;25!UBERON:0002368;9.57e-12;33!UBERON:0002365;9.71e-12;31!UBERON:0002330;9.71e-12;31!UBERON:0000949;2.21e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.05e-19,19;UBERON:0006925,5.05e-19,19;UBERON:0008836,5.05e-19,19;UBERON:0008835,1.70e-16,22;UBERON:0003894,1.70e-16,22;UBERON:0009854,8.45e-16,23;UBERON:0007499,1.43e-14,25;UBERON:0009497,1.43e-14,25;UBERON:0000015,1.43e-14,25;UBERON:0002423,1.43e-14,25;UBERON:0006235,1.43e-14,25;UBERON:0004161,1.43e-14,25;UBERON:0009856,4.98e-14,26;UBERON:0002365,7.79e-12,31;UBERON:0002330,7.79e-12,31;UBERON:0002368,1.58e-10,35;UBERON:0000949,2.88e-08,45;UBERON:0003929,6.11e-07,54;UBERON:0005172,6.11e-07,54;UBERON:0005173,6.11e-07,54;UBERON:0005911,6.86e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.2808055714929,10.8110993834539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.808729926293264,0,0,0,0.731140468893853,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718061155278177,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,1.79556088975062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,2.2562765983567,0.0979923974143777,0.174118413160805,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0.418411385249333,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879313402068495,449.19835341243,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0.983617892129413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,1.3503982678964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.88332946650923,0.235939446695481,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1307320545446,0.955538938977433,0.223710863595585,0,0.365753774946808,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452122368852043,0.434523000071005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@MT1B | |||
}} |
Revision as of 03:44, 12 January 2014
Short description: | p1@MT1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MT1B_5end |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | -9bp_to_ENST00000334346, NM_005947, uc002ejs.2_5end |
EntrezGene: | MT1B |
HGNC: | 7394 |
UniProt: | P07438Q86YX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.44e-17 | 12 |
epithelial cell of uterus | 9.74e-16 | 6 |
stromal cell of endometrium | 9.74e-16 | 6 |
endodermal cell | 1.06e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 5.05e-19 | 19 |
digestive gland | 5.05e-19 | 19 |
liver bud | 5.05e-19 | 19 |
hepatic diverticulum | 1.70e-16 | 22 |
liver primordium | 1.70e-16 | 22 |
digestive tract diverticulum | 8.45e-16 | 23 |
epithelial sac | 1.43e-14 | 25 |
epithelium of foregut-midgut junction | 1.43e-14 | 25 |
anatomical boundary | 1.43e-14 | 25 |
hepatobiliary system | 1.43e-14 | 25 |
foregut-midgut junction | 1.43e-14 | 25 |
septum transversum | 1.43e-14 | 25 |
sac | 4.98e-14 | 26 |
exocrine gland | 7.79e-12 | 31 |
exocrine system | 7.79e-12 | 31 |
endocrine gland | 1.58e-10 | 35 |
endocrine system | 2.88e-08 | 45 |
gut epithelium | 6.11e-07 | 54 |
abdomen element | 6.11e-07 | 54 |
abdominal segment element | 6.11e-07 | 54 |
endo-epithelium | 6.86e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 9.74e-16 | 6 |
clear cell adenocarcinoma | 2.59e-12 | 2 |
adenocarcinoma | 1.30e-08 | 25 |
female reproductive organ cancer | 5.12e-08 | 27 |
reproductive organ cancer | 1.67e-07 | 29 |