FFCP PHASE1:Hg19::chr16:57896679..57896687,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3801 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6326 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=45bp_to_AK091891,AX747237_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_34_at_KIFC3_5end | |||
|id=chr16:57896679..57896687,- | |||
|ontology_enrichment_celltype=CL:0002599!6.65e-14!1;CL:0000181!3.61e-10!12;CL:0000417!3.61e-10!12;CL:0000668!3.61e-10!12;CL:0000414!3.61e-10!12;CL:0000412!3.61e-10!12;CL:0000182!3.61e-10!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.26e-37;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.26e-37,12;CL:0000223,1.46e-08,58 | |||
|ontology_enrichment_development_v019=CL:0000223;2.02e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.92e-11!19;UBERON:0006925!4.92e-11!19;UBERON:0008836!4.92e-11!19;UBERON:0008835!1.47e-09!22;UBERON:0003894!1.47e-09!22;UBERON:0009854!3.75e-09!23;UBERON:0007499!1.96e-08!25;UBERON:0009497!1.96e-08!25;UBERON:0000015!1.96e-08!25;UBERON:0002423!1.96e-08!25;UBERON:0006235!1.96e-08!25;UBERON:0004161!1.96e-08!25;UBERON:0005057!4.07e-08!26;UBERON:0009856!4.07e-08!26;UBERON:0002365!7.81e-07!31;UBERON:0002330!7.81e-07!31;UBERON:0004921!8.57e-07!129;UBERON:0004185!8.57e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.83e-42;19!UBERON:0006925;3.83e-42;19!UBERON:0002423;2.66e-32;25!UBERON:0002365;4.24e-27;31!UBERON:0002330;4.24e-27;31!UBERON:0002368;9.81e-22;33!UBERON:0000949;3.55e-18;43!UBERON:0005172;2.72e-13;52!UBERON:0005173;2.72e-13;52!UBERON:0002530;6.53e-10;57!UBERON:0001007;1.03e-09;81!UBERON:0002417;4.51e-09;58!UBERON:0000916;4.51e-09;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.83e-42,19;UBERON:0006925,3.83e-42,19;UBERON:0008836,3.83e-42,19;UBERON:0008835,1.49e-36,22;UBERON:0003894,1.49e-36,22;UBERON:0009854,5.16e-35,23;UBERON:0007499,2.66e-32,25;UBERON:0009497,2.66e-32,25;UBERON:0000015,2.66e-32,25;UBERON:0002423,2.66e-32,25;UBERON:0006235,2.66e-32,25;UBERON:0004161,2.66e-32,25;UBERON:0009856,4.21e-31,26;UBERON:0002365,2.93e-26,31;UBERON:0002330,2.93e-26,31;UBERON:0002368,2.23e-23,35;UBERON:0000949,2.09e-18,45;UBERON:0003929,1.70e-15,54;UBERON:0005172,1.70e-15,54;UBERON:0005173,1.70e-15,54;UBERON:0002530,2.92e-14,59;UBERON:0002417,4.87e-14,60;UBERON:0000916,4.87e-14,60;UBERON:0005911,1.66e-10,82;UBERON:0001041,5.98e-10,87;UBERON:0005177,1.11e-08,101;UBERON:0009569,6.64e-08,112;UBERON:0003914,1.34e-07,117;UBERON:0004921,1.75e-07,118;UBERON:0005256,2.56e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,2.94848165003288,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51725360827398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p34@KIFC3 | |||
}} |
Revision as of 11:42, 20 January 2014
Short description: | p34@KIFC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_34_at_KIFC3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 45bp_to_AK091891, AX747237_5end |
EntrezGene: | KIFC3 |
HGNC: | 6326 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.26e-37 | 12 |
endodermal cell | 1.46e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 3.83e-42 | 19 |
digestive gland | 3.83e-42 | 19 |
liver bud | 3.83e-42 | 19 |
hepatic diverticulum | 1.49e-36 | 22 |
liver primordium | 1.49e-36 | 22 |
digestive tract diverticulum | 5.16e-35 | 23 |
epithelial sac | 2.66e-32 | 25 |
epithelium of foregut-midgut junction | 2.66e-32 | 25 |
anatomical boundary | 2.66e-32 | 25 |
hepatobiliary system | 2.66e-32 | 25 |
foregut-midgut junction | 2.66e-32 | 25 |
septum transversum | 2.66e-32 | 25 |
sac | 4.21e-31 | 26 |
exocrine gland | 2.93e-26 | 31 |
exocrine system | 2.93e-26 | 31 |
endocrine gland | 2.23e-23 | 35 |
endocrine system | 2.09e-18 | 45 |
gut epithelium | 1.70e-15 | 54 |
abdomen element | 1.70e-15 | 54 |
abdominal segment element | 1.70e-15 | 54 |
gland | 2.92e-14 | 59 |
abdominal segment of trunk | 4.87e-14 | 60 |
abdomen | 4.87e-14 | 60 |
endo-epithelium | 1.66e-10 | 82 |
foregut | 5.98e-10 | 87 |
trunk region element | 1.11e-08 | 101 |
subdivision of trunk | 6.64e-08 | 112 |
epithelial tube | 1.34e-07 | 117 |
subdivision of digestive tract | 1.75e-07 | 118 |
trunk mesenchyme | 2.56e-07 | 122 |