FFCP PHASE1:Hg19::chr16:89768097..89768126,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=124044 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28393 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IUW3 | |||
|association_with_transcript=0bp_to_ENST00000289805,ENST00000335360,NM_152339,uc002foj.2,uc002fok.2_5end | |||
|description=CAGE_peak_1_at_SPATA2L_5end | |||
|id=chr16:89768097..89768126,- | |||
|ontology_enrichment_celltype=CL:0002057!6.88e-14!42;CL:0000766!2.41e-12!76;CL:0000860!1.22e-11!45;CL:0000557!1.50e-09!71;CL:0002009!2.13e-08!65;CL:0000738!2.45e-08!140;CL:0002194!6.02e-08!63;CL:0000576!6.02e-08!63;CL:0000040!6.02e-08!63;CL:0000559!6.02e-08!63;CL:0000839!6.87e-08!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.43e-10;33!CL:0002057;9.43e-10;33!CL:0000576;2.62e-07;48!CL:0000473;4.04e-07;39!CL:0000234;4.04e-07;39!CL:0000094;6.08e-07;8!CL:0000766;8.37e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.57e-15,72;CL:0000860,5.78e-14,42;CL:0002057,5.78e-14,42;CL:0000557,7.32e-12,67;CL:0000473,1.65e-11,48;CL:0000234,1.65e-11,48;CL:0002009,1.33e-10,61;CL:0002194,4.12e-10,59;CL:0000576,4.12e-10,59;CL:0000040,4.12e-10,59;CL:0000559,4.12e-10,59;CL:0000839,5.36e-10,66;CL:0000738,6.81e-10,136;CL:0000094,9.96e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.87e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.30e-09!102;UBERON:0003061!2.30e-09!102;UBERON:0003081!4.75e-09!216;UBERON:0001474!5.48e-09!86;UBERON:0002371!2.14e-08!80;UBERON:0002193!6.58e-08!112;UBERON:0002405!8.51e-08!115;UBERON:0004765!5.23e-07!101;UBERON:0001434!5.23e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.79e-11,98;UBERON:0003061,3.79e-11,98;UBERON:0001474,5.68e-11,82;UBERON:0002371,2.17e-10,76;UBERON:0004765,5.94e-10,90;UBERON:0003081,6.82e-10,203;UBERON:0002193,2.46e-09,108;UBERON:0001434,9.28e-09,100;UBERON:0002405,2.22e-08,93 | |||
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| |||
|short_description=p1@SPATA2L | |||
}} |
Revision as of 12:50, 20 January 2014
Short description: | p1@SPATA2L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPATA2L_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000289805, ENST00000335360, NM_152339, uc002foj.2, uc002fok.2_5end |
EntrezGene: | SPATA2L |
HGNC: | 28393 |
UniProt: | Q8IUW3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.57e-15 | 72 |
classical monocyte | 5.78e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.78e-14 | 42 |
granulocyte monocyte progenitor cell | 7.32e-12 | 67 |
defensive cell | 1.65e-11 | 48 |
phagocyte | 1.65e-11 | 48 |
macrophage dendritic cell progenitor | 1.33e-10 | 61 |
monopoietic cell | 4.12e-10 | 59 |
monocyte | 4.12e-10 | 59 |
monoblast | 4.12e-10 | 59 |
promonocyte | 4.12e-10 | 59 |
myeloid lineage restricted progenitor cell | 5.36e-10 | 66 |
leukocyte | 6.81e-10 | 136 |
granulocyte | 9.96e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.79e-11 | 98 |
blood island | 3.79e-11 | 98 |
bone element | 5.68e-11 | 82 |
bone marrow | 2.17e-10 | 76 |
skeletal element | 5.94e-10 | 90 |
lateral plate mesoderm | 6.82e-10 | 203 |
hemolymphoid system | 2.46e-09 | 108 |
skeletal system | 9.28e-09 | 100 |
immune system | 2.22e-08 | 93 |