FFCP PHASE1:Hg19::chr17:42393816..42393841,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_at_chr17:42393816..42393841,+ | |||
|id=chr17:42393816..42393841,+ | |||
|ontology_enrichment_celltype=CL:0002322!3.82e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000764;7.67e-26;2!CL:0000558;7.67e-26;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,7.67e-26,2;CL:0000765,7.67e-26,2;CL:0000050,7.67e-26,2;CL:0000038,7.67e-26,2;CL:0000558,7.67e-26,2;CL:0000547,7.67e-26,2;CL:0000549,7.67e-26,2;CL:0000550,7.67e-26,2;CL:0000552,7.67e-26,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.35e-30!115;UBERON:0000178!1.45e-15!15;UBERON:0000179!1.45e-15!15;UBERON:0000463!1.45e-15!15;UBERON:0002020!1.58e-15!34;UBERON:0003528!1.58e-15!34;UBERON:0001017!3.48e-15!82;UBERON:0001049!5.35e-15!57;UBERON:0005068!5.35e-15!57;UBERON:0006241!5.35e-15!57;UBERON:0007135!5.35e-15!57;UBERON:0005743!3.92e-14!86;UBERON:0002791!4.37e-14!33;UBERON:0001893!1.47e-13!34;UBERON:0002346!2.40e-13!90;UBERON:0003075!3.59e-13!86;UBERON:0007284!3.59e-13!86;UBERON:0001869!6.01e-13!32;UBERON:0002619!7.16e-13!22;UBERON:0002616!7.41e-13!59;UBERON:0002780!3.36e-12!41;UBERON:0001890!3.36e-12!41;UBERON:0006240!3.36e-12!41;UBERON:0000073!4.24e-12!94;UBERON:0001016!4.24e-12!94;UBERON:0001950!4.32e-12!20;UBERON:0003080!8.23e-12!42;UBERON:0000955!4.64e-11!69;UBERON:0006238!4.64e-11!69;UBERON:0000956!4.93e-11!25;UBERON:0000203!4.93e-11!25;UBERON:0001871!1.64e-09!7;UBERON:0003978!9.30e-08!3;UBERON:0009751!9.30e-08!3;UBERON:0000946!9.30e-08!3;UBERON:0002523!9.30e-08!3;UBERON:0005983!9.30e-08!3;UBERON:0002165!9.30e-08!3;UBERON:0002062!9.30e-08!3;UBERON:0007280!9.30e-08!3;UBERON:0005383!1.31e-07!3;UBERON:0005382!1.31e-07!3;UBERON:0002771!2.15e-07!3;UBERON:0000924!2.58e-07!173;UBERON:0006601!2.58e-07!173;UBERON:0004121!4.47e-07!169;UBERON:0003056!7.01e-07!61;UBERON:0000988!8.65e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.15e-66;15!UBERON:0000179;1.15e-66;15!UBERON:0000463;1.15e-66;15!UBERON:0002390;3.10e-35;32!UBERON:0002193;1.10e-17;42!UBERON:0002134;2.07e-13;1!UBERON:0005208;2.07e-13;1!UBERON:0004145;2.07e-13;1!UBERON:0005946;2.07e-13;1!UBERON:0005965;2.07e-13;1!UBERON:0002078;2.07e-13;1!UBERON:0002081;2.40e-07;2!UBERON:0002133;2.40e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.15e-66,15;UBERON:0000179,1.15e-66,15;UBERON:0000463,1.15e-66,15;UBERON:0007023,2.45e-14,114;UBERON:0002134,2.07e-13,1;UBERON:0005208,2.07e-13,1;UBERON:0005946,2.07e-13,1;UBERON:0005965,2.07e-13,1;UBERON:0002078,2.07e-13,1;UBERON:0002390,1.69e-11,98;UBERON:0003061,1.69e-11,98;UBERON:0002193,2.49e-10,108;UBERON:0004535,2.60e-10,109;UBERON:0001009,5.31e-10,112;UBERON:0002081,2.40e-07,2;UBERON:0002133,2.40e-07,2;UBERON:0010227,2.40e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.530119073285941,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,17.1022703783829,18.5619170227679,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,29.4319613354658,38.2318603571188,21.6465931126182,6.19402616190251,8.22724546172388,20.751145958167,25.9215089874295,30.1387566991823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,21.5534783112246,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.110579259931225,0.295547618953547,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.126621591911757,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,1.43574604915363,0,0,0,0.739018197353989,0,0,0,0,0,0,0,0,0.272406812223151,0.482259445395058,0.412618309791701,0.415440338029185,0,0,0.182248669974074,0,0.157611414598396,0.681909645754975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97520666736664,0.129282956361551,0.26446520348538,0,0,0,2.82967749179399,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.625954653532499,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.126831620387814,0,0,0,0.175871244359621,0,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0,0,0,0.078493092850514,0.471346769748006,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4794432940146,0,0,0.198950775161368,0,0,0,0,0,0.218559560503957,0,0,0.235676547101626,0,0.297046400327086,0,0,0,3.99638905436179,0,0,0,0,0.730336388246517,0,0,0,0.203974470572744,0.436350690340377,0,0,0,0,0,0.218531143927391,0.126698501011437,0,0.801652215796681,0.18378979906969,0.250707539292375,0,0,0.829169439458779,0,0,0.952257725854961,0,0.31037357147929,0,0,0.202117188958219,0,0.342233301085281,0,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr17:42393816..42393841,+ | |||
}} |
Revision as of 15:39, 20 January 2014
Short description: | p@chr17:42393816..42393841, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:42393816..42393841, + |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 7.67e-26 | 2 |
erythroblast | 7.67e-26 | 2 |
megakaryocyte-erythroid progenitor cell | 7.67e-26 | 2 |
erythroid progenitor cell | 7.67e-26 | 2 |
reticulocyte | 7.67e-26 | 2 |
proerythroblast | 7.67e-26 | 2 |
basophilic erythroblast | 7.67e-26 | 2 |
polychromatophilic erythroblast | 7.67e-26 | 2 |
orthochromatic erythroblast | 7.67e-26 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.15e-66 | 15 |
haemolymphatic fluid | 1.15e-66 | 15 |
organism substance | 1.15e-66 | 15 |
adult organism | 2.45e-14 | 114 |
tricuspid valve | 2.07e-13 | 1 |
right atrium valve | 2.07e-13 | 1 |
outflow tract of atrium | 2.07e-13 | 1 |
outflow part of right atrium | 2.07e-13 | 1 |
right cardiac atrium | 2.07e-13 | 1 |
hematopoietic system | 1.69e-11 | 98 |
blood island | 1.69e-11 | 98 |
hemolymphoid system | 2.49e-10 | 108 |
cardiovascular system | 2.60e-10 | 109 |
circulatory system | 5.31e-10 | 112 |
cardiac atrium | 2.40e-07 | 2 |
atrioventricular valve | 2.40e-07 | 2 |
future cardiac atrium | 2.40e-07 | 2 |