FFCP PHASE1:Hg19::chr19:49232299..49232382,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54922 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=24716 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NX72,Q7L251 | |||
|association_with_transcript=0bp_to_AK000408,BC021860_5end | |||
|description=CAGE_peak_4_at_RASIP1_5end | |||
|id=chr19:49232299..49232382,- | |||
|ontology_enrichment_celltype=CL:0002077!2.14e-07!33;CL:1000507!4.24e-07!12;CL:1000494!4.24e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:1000507;8.71e-08;10!CL:1000494;8.71e-08;10!CL:0002202;5.94e-07;9!CL:0002632;5.94e-07;9!CL:0000244;9.89e-07;4!CL:0000731;9.89e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.06e-12,253;CL:1000507,6.50e-08,10;CL:1000494,6.50e-08,10;CL:0002202,5.00e-07,9;CL:0002632,5.00e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000064!2.01e-18!219;UBERON:0000481!6.11e-17!347;UBERON:0000468!3.20e-14!659;UBERON:0000922!5.70e-14!612;UBERON:0002050!6.57e-12!605;UBERON:0005423!6.57e-12!605;UBERON:0000477!1.10e-11!286;UBERON:0000480!1.32e-11!626;UBERON:0000923!1.48e-11!604;UBERON:0005291!1.48e-11!604;UBERON:0006598!1.48e-11!604;UBERON:0002532!1.48e-11!604;UBERON:0000119!2.91e-11!312;UBERON:0000483!3.18e-11!309;UBERON:0000467!3.59e-11!625;UBERON:0000475!6.22e-11!365;UBERON:0000956!6.61e-10!25;UBERON:0000203!6.61e-10!25;UBERON:0001737!1.82e-09!9;UBERON:0002619!3.15e-09!22;UBERON:0001869!4.18e-09!32;UBERON:0002020!1.24e-08!34;UBERON:0003528!1.24e-08!34;UBERON:0001950!1.70e-08!20;UBERON:0003056!2.23e-08!61;UBERON:0000153!2.45e-08!129;UBERON:0007811!2.45e-08!129;UBERON:0007023!2.51e-08!115;UBERON:0000063!2.51e-08!97;UBERON:0003075!2.93e-08!86;UBERON:0007284!2.93e-08!86;UBERON:0000033!3.37e-08!123;UBERON:0000065!3.46e-08!53;UBERON:0001893!4.47e-08!34;UBERON:0004111!5.42e-08!241;UBERON:0000062!6.10e-08!511;UBERON:0000025!9.86e-08!194;UBERON:0002791!1.43e-07!33;UBERON:0001004!2.08e-07!72;UBERON:0002346!3.01e-07!90;UBERON:0004121!3.05e-07!169;UBERON:0000464!3.30e-07!104;UBERON:0009773!4.24e-07!12;UBERON:0001231!4.24e-07!12;UBERON:0004810!4.24e-07!12;UBERON:0003103!5.24e-07!69;UBERON:0002780!5.89e-07!41;UBERON:0001890!5.89e-07!41;UBERON:0006240!5.89e-07!41;UBERON:0001049!9.27e-07!57;UBERON:0005068!9.27e-07!57;UBERON:0006241!9.27e-07!57;UBERON:0007135!9.27e-07!57;UBERON:0001557!9.32e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.11e-18;9!UBERON:0001557;8.11e-18;9!UBERON:0000072;1.23e-12;37!UBERON:0000065;6.77e-10;44!UBERON:0002619;2.55e-09;22!UBERON:0001950;6.29e-09;20!UBERON:0007196;3.22e-08;15!UBERON:0001558;3.22e-08;15!UBERON:0000365;6.41e-08;5!UBERON:0000956;6.86e-08;25!UBERON:0000203;6.86e-08;25!UBERON:0004211;8.71e-08;10!UBERON:0009773;8.71e-08;10!UBERON:0001231;8.71e-08;10!UBERON:0004810;8.71e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,8.03e-18,9;UBERON:0008947,4.49e-12,38;UBERON:0003258,4.49e-12,38;UBERON:0000072,5.56e-11,47;UBERON:0000065,7.99e-10,54;UBERON:0002619,2.20e-09,22;UBERON:0001950,6.08e-09,20;UBERON:0001557,1.22e-08,19;UBERON:0007196,2.49e-08,15;UBERON:0001558,2.49e-08,15;UBERON:0000956,6.05e-08,25;UBERON:0000203,6.05e-08,25;UBERON:0004810,6.50e-08,10;UBERON:0000365,1.07e-07,5;UBERON:0000922,5.82e-07,592 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.281908808191942,0,0.446961094427288,0,0,0,1.04474251279935,1.72013755551056,2.09340350391728,3.05817920982241,2.63766978228454,0,0,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0.408001382488506,0,0.286235987131057,0.410623275218653,0.376627918784408,0,0,0,0,0,0,5.51652734687356,10.5422071572388,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289648807765598,4.87613732627923,0,0.12786256184353,0,0,0,0,0,0.378139268656271,0,0.43917392846563,0.392937226493138,9.4716774956061,9.64039551239516,0,0,0,0,0,0.371457501329565,0.39752481473341,0.860234595106124,0,0,0.419499436209906,1.10047216776027,0.208994966536811,0.258416759169329,0,0,0.402829317109147,0,0.24406205754817,0,0,0.17859945656816,0,0,0,0,0,0,0,3.92484646928281,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0.597794722207204,0.352303495931295,0,0,0,0.859840221182376,0.206651562351531,0,0.247266929278557,0.910161361938026,0,0.841680569770331,0.500474079487857,0,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,2.89891279744945,0.272746120590835,0.573609190778008,1.46368447355514,2.38553582978673,1.04574548582567,0.310983165046111,1.7662459561294,0,0,0,0,0.464367928031979,0,9.7011576032672,10.9580048550766,8.91740810568883,9.48528165498588,13.2906460896368,11.6262603364437,10.1123481120123,7.6526371398885,10.3881732375525,0,0,1.6462960453256,0,0,0,0,0,0,0.343135620597051,2.08525542276389,5.62008766288098,3.51851403440708,1.29623823221941,0,1.03993478527958,2.88662684050547,0,0.234817388471643,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0.567100388969546,0,0,0.383382679165211,0,0,0,0,0,0.126995788584338,0.763976851116555,7.03304683260282,1.71072446022705,0.102827492703324,0,5.14487578735041,0.112131084345361,0,0.07333828582095,0,3.57656445851882,0,0,0,0,0,0.266422179016099,0.285955987316295,0,1.64648067356154,0,0.710783897485092,0.791951872933429,0,0,1.09970290300263,0,0,0,0.239624855491583,2.29723871668228,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0.473107245101804,0,0,0,1.03473071292505,0,0.368738337083406,0.260650843404249,0,0,0,0,0,2.12189300012382,0,1.5119514666484,0,0.306923946576125,0,1.40953064181271,0,0,0,0.462629081407967,0.177561725313127,0.246381468041427,0,0.348631135379878,0,0,0.276242966807689,0,0,0,3.60959690325929,1.92538342761037,5.49044838423799,2.92278449306521,1.26661954671451,0,0.850468526382578,0.431831832204279,0,0.541892875087706,3.01013864312912,0.764628819135115,0.831076008928724,2.23874754722178,0,0,0,0.328014645699706,0.650756789328606,0.206082023295445,0,0,2.29706215198469,0,0,0.290012154876366,0.308097234229289,0.15350367472613,0.964856007391714,0.107420244868274,0.580066775656914,0.255679882248303,0.356128142586949,0.826424576804891,1.34533047155574,0.382838137483752,0.30347334256665,0.464845549297286,0.31481234683064,0,0,1.59691809095107,0.869932992075073,0,0.143124886741991,0.372158369359667,0,1.14378116354295,2.04718233049067,0,0,0.78494864019923,0.179872457583315,0.54907405947211,0.353437207037059,1.01091240786658,6.34041284692033,0.421258456238981,2.43816869544795,0,0,0,0,1.13008116620243,0,0,0,3.47265320560013,0,1.01455188481352,0,0.281695602532241,0.286822704408103,0.0982490410131212,0,0,0,0,0.379473173765715,0.349934720244983,3.56021817084395,2.01090682660736,4.3556393944529,0.0941438007767792,1.29151611801369,3.36942951335251,1.33029046061003,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.71623345421307,1.48482340416319,0.921482106297696,1.9882952955326,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,1.93866549219044,1.94813006139888,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0.219385397153973,0,6.83176346965156,0.615602068030377,0,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0.995261931078505,0.530745387020035,1.22206028986725,0,0,0,0,0.802577647298789,0,0,0,0,1.18375320854817,1.20990716048664,0.30607276163049,0.252746318513952,0,0,0,0,0,0,0,0,0,10.2892017285097,7.05179573301261,0,0,20.0285605768406,17.8337933690293,21.185787919728,1.26085721434945,0,0,0,2.58328995213887,1.45614830698521,2.15106521008283,0,0.85381197895741,0,0,0,0,0,0,7.30651507312066,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,1.59045937961861,0.272406812223151,1.28602518772015,1.51293380256957,3.73896304226267,0,0,1.09349201984444,5.36695500158826,0.0788057072991982,0.629455057619977,0,0,9.78767506329171,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0,0,0,1.32506888912221,1.42211251997706,0.13223260174269,0,0,0.427149650270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| |||
|short_description=p4@RASIP1 | |||
}} |
Revision as of 00:20, 21 January 2014
Short description: | p4@RASIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RASIP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AK000408, BC021860_5end |
EntrezGene: | RASIP1 |
HGNC: | 24716 |
UniProt: | Q9NX72Q7L251 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.06e-12 | 253 |
kidney tubule cell | 6.50e-08 | 10 |
nephron tubule epithelial cell | 6.50e-08 | 10 |
epithelial cell of tracheobronchial tree | 5.00e-07 | 9 |
epithelial cell of lower respiratory tract | 5.00e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
larynx | 8.03e-18 | 9 |
respiratory primordium | 4.49e-12 | 38 |
endoderm of foregut | 4.49e-12 | 38 |
segment of respiratory tract | 5.56e-11 | 47 |
respiratory tract | 7.99e-10 | 54 |
regional part of cerebral cortex | 2.20e-09 | 22 |
neocortex | 6.08e-09 | 20 |
upper respiratory tract | 1.22e-08 | 19 |
tracheobronchial tree | 2.49e-08 | 15 |
lower respiratory tract | 2.49e-08 | 15 |
cerebral cortex | 6.05e-08 | 25 |
pallium | 6.05e-08 | 25 |
nephron tubule epithelium | 6.50e-08 | 10 |
urothelium | 1.07e-07 | 5 |
embryo | 5.82e-07 | 592 |