FFCP PHASE1:Hg19::chr2:25391442..25391456,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5443 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9201 | |||
|TSSclassifier=strong | |||
|UniProt=P01189,E9PHK5 | |||
|association_with_transcript=-2bp_to_ENST00000264708,ENST00000449220_5end | |||
|coexpression_cluster_id=C115 | |||
|description=CAGE_peak_1_at_POMC_5end | |||
|id=chr2:25391442..25391456,- | |||
|ontology_enrichment_celltype=CL:0002541!1.69e-16!3;CL:0002322!1.81e-16!5;CL:0000039!1.31e-12!7;CL:0000586!1.31e-12!7;CL:0002605!1.08e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000039;4.36e-17;7!CL:0000586;4.36e-17;7!CL:0002541;1.09e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.02e-17,7;CL:0000586,4.02e-17,7;CL:0002541,1.20e-10,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4556;8.17e-11;3!DOID:3908;5.38e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,8.17e-11,3;DOID:3908,5.38e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.69e-16!3;UBERON:0000920!1.69e-16!3;UBERON:0001896!4.55e-16!3;UBERON:0005290!4.55e-16!3;UBERON:0010096!4.55e-16!3;UBERON:0000007!2.84e-12!2;UBERON:0003124!4.13e-12!7;UBERON:0003135!5.08e-12!11;UBERON:0000473!7.10e-11!8;UBERON:0003101!9.38e-11!22;UBERON:0000079!9.38e-11!22;UBERON:0002298!2.50e-10!8;UBERON:0004907!3.76e-10!5;UBERON:0005631!4.61e-09!14;UBERON:0000158!4.61e-09!14;UBERON:0001049!1.20e-08!57;UBERON:0005068!1.20e-08!57;UBERON:0006241!1.20e-08!57;UBERON:0007135!1.20e-08!57;UBERON:0002616!2.72e-08!59;UBERON:0001894!1.63e-07!7;UBERON:0006222!1.63e-07!7;UBERON:0004733!6.48e-07!12;UBERON:0002028!6.48e-07!12;UBERON:0007277!6.48e-07!12;UBERON:0007023!7.38e-07!115;UBERON:0001301!8.21e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;1.13e-57;2!UBERON:0003296;1.78e-29;4!UBERON:0010133;1.78e-29;4!UBERON:0001894;2.46e-17;7!UBERON:0003124;1.09e-10;3!UBERON:0000920;1.09e-10;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.13e-57,2;UBERON:0003296,1.78e-29,4;UBERON:0010133,1.78e-29,4;UBERON:0001894,2.46e-17,7;UBERON:0006222,2.46e-17,7;UBERON:0000920,1.20e-10,3;UBERON:0002780,8.70e-07,41;UBERON:0001890,8.70e-07,41;UBERON:0003080,8.70e-07,41;UBERON:0006240,8.70e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.464775771478074,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0.552567831062295,0.755798243562828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3037684630641,0.638002319463839,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.262272940674991,0,3.04788476865836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,429.731647799535,2429.3832439097,0.177404740325278,0,0,0.0679697329768317,0,0,0.111231401892069,0.156986185701028,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.713921808193872,0.26721740526556,0,2.25636785363138,0,0.267964130156178,0,0,0,0,0.258355639344024,0.869046000142011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p1@POMC | |||
}} |
Revision as of 02:07, 21 January 2014
Short description: | p1@POMC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_POMC_5end |
Coexpression cluster: | C115_pituitary_Neural_caudate_putamen_amygdala_medulla_hippocampus |
Association with transcript: | -2bp_to_ENST00000264708, ENST00000449220_5end |
EntrezGene: | POMC |
HGNC: | 9201 |
UniProt: | P01189E9PHK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.02e-17 | 7 |
germ cell | 4.02e-17 | 7 |
chorionic membrane mesenchymal stem cell | 1.20e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.13e-57 | 2 |
gland of diencephalon | 1.78e-29 | 4 |
neuroendocrine gland | 1.78e-29 | 4 |
diencephalon | 2.46e-17 | 7 |
future diencephalon | 2.46e-17 | 7 |
egg chorion | 1.20e-10 | 3 |
regional part of forebrain | 8.70e-07 | 41 |
forebrain | 8.70e-07 | 41 |
anterior neural tube | 8.70e-07 | 41 |
future forebrain | 8.70e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 8.17e-11 | 3 |
non-small cell lung carcinoma | 5.38e-07 | 5 |