FFCP PHASE1:Hg19::chr2:85788941..85788961,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=2677 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4247 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-271bp_to_ENST00000496962_5end | |||
|description=CAGE_peak_6_at_GGCX_5end | |||
|id=chr2:85788941..85788961,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.94e-24;12!CL:0000511;2.71e-19;1!CL:0002625;2.71e-19;1!CL:0000216;2.71e-19;1!CL:0000771;1.43e-10;2!CL:0002577;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.53e-24,12;CL:0000511,2.71e-19,1;CL:0002625,2.71e-19,1;CL:0000216,2.71e-19,1;CL:0000771,1.43e-10,2;CL:0002577,2.32e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.37e-15;11!UBERON:0009497;4.28e-13;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.71e-19;1!UBERON:0001343;2.71e-19;1!UBERON:0004910;2.71e-19;1!UBERON:0004813;2.71e-19;1!UBERON:0002107;1.74e-15;19!UBERON:0006925;1.74e-15;19!UBERON:0002423;7.36e-12;25!UBERON:0004909;2.48e-10;2!UBERON:0002365;3.78e-09;31!UBERON:0002330;3.78e-09;31!UBERON:0002368;1.77e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,2.71e-19,1;UBERON:0001343,2.71e-19,1;UBERON:0004910,2.71e-19,1;UBERON:0005154,2.71e-19,1;UBERON:0005295,2.71e-19,1;UBERON:0004813,2.71e-19,1;UBERON:0005297,2.71e-19,1;UBERON:0005294,2.71e-19,1;UBERON:0010141,2.71e-19,1;UBERON:0005891,2.71e-19,1;UBERON:0002107,1.95e-15,19;UBERON:0006925,1.95e-15,19;UBERON:0008836,1.95e-15,19;UBERON:0008835,2.20e-13,22;UBERON:0003894,2.20e-13,22;UBERON:0009854,8.08e-13,23;UBERON:0007499,8.02e-12,25;UBERON:0009497,8.02e-12,25;UBERON:0000015,8.02e-12,25;UBERON:0002423,8.02e-12,25;UBERON:0006235,8.02e-12,25;UBERON:0004161,8.02e-12,25;UBERON:0009856,2.22e-11,26;UBERON:0004909,2.49e-10,2;UBERON:0002365,1.35e-09,31;UBERON:0002330,1.35e-09,31;UBERON:0002368,1.56e-08,35 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0.331397375727916,0,0,0,0.487932798790507,0.246242116153576,0,0,0,0,0,0,0.164201178899891,0,0,0,0,0,0.30120591877825,0.369754010166788,0.0774672005803016,0,0,0,0,0.217010870715852,0.223915474239924,0,0.257575567634187,0,0,0.242584061187816,0.232429036905685,0,0,0.575384784644301,0,0.47296445977717,0,0,0,0,0,0,0.306083892370903,0,0,0.659702600373432,0.199463657621632,0.852449501065388,0.290209238628584,0,0,0.251248665256743,1.0429658368404,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,1.94826728407911,0.111410456885174,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0,0,0.386521706326594,0,0,0.243947412259191,0.132529768321485,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0.982827216677626,1.18157981336281,0,0.368965315629341,0,0,0,0,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0.790204397959275,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0.871533458600294,0,0,0,2.10833939483032,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,1.66435439510497,0,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,1.6068392984416,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0,0,0.0982490410131212,0.35667105148125,0,0.211107635297664,0,0,0.349934720244983,0,0,0,0.376575203107117,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0.201799707191048,0.425846237690326,0,0,0.223676107892416,0.500547425135725,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0,0,0.123084805461069,0.311039587661807,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0.219385397153973,0.10893846351899,0,0,0,0,0.269272933229316,0.217294743844016,0,0.0915975934018623,0,0,0,0,0,0,0.167821586975843,0,0.158936578980379,0,0,0.424059214301822,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0.30607276163049,0.063186579628488,0.300646838828985,0.103688191397247,0,0.330991955875499,0,0,0.284609546029793,0,0.173559738335131,0,0.0870592065804026,0,0,0.19351266257817,0.365446585430928,0.164230914106418,0.0969890164884194,0,0,0,0,0,0,0,0,0.19980960958213,0.144090417154106,0,0.343189995723929,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0.0671834724867263,0,1.16495949527454,1.3393140992228,1.7307330260045,0.539228350833479,0.0984274815147488,0.169346664131569,0,0,0,0,0,0.449947783103001,0.77380195455795,0.0607495566580247,0,0,0.0524545881349981,0.105600336519406,0,0.191915197319445,0,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,0.879313402068495,0,0,0,0.171086837884329,0,0.213574825135389,0,0,0,0,0.121792598380896,0,1.63205341010842,0.2506898940227,0.306345576763462,0.327872630709804,0,0,0.122026264901963,0,0,0.110929051536852,0.124192805882767,0.138348634936231,0,0.151649117541648,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0.607719912354764,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0.198916222116275,0,0,0,0.785720083444267,0,0.147856086217045,0.0675375846183947,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.0887023701626388,0.345701962667338,0.171488009437418,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0.121917924982269,0.647428837187895,0.102662806856247,0,0,0,0,0,0.22589216407792,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0.160482733378337,0,0,0,0,0.271965960763659,0,0,0,0.462175628631418,0,0,0.218531143927391,0.126698501011437,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| |||
|short_description=p6@GGCX | |||
}} |
Revision as of 04:12, 21 January 2014
Short description: | p6@GGCX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_GGCX_5end |
Coexpression cluster: | NA |
Association with transcript: | -271bp_to_ENST00000496962_5end |
EntrezGene: | GGCX |
HGNC: | 4247 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.53e-24 | 12 |
androgen binding protein secreting cell | 2.71e-19 | 1 |
seminiferous tubule epithelial cell | 2.71e-19 | 1 |
Sertoli cell | 2.71e-19 | 1 |
eosinophil | 1.43e-10 | 2 |
placental epithelial cell | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 2.71e-19 | 1 |
seminiferous tubule of testis | 2.71e-19 | 1 |
epithelium of male gonad | 2.71e-19 | 1 |
epithelial cord | 2.71e-19 | 1 |
sex cord | 2.71e-19 | 1 |
seminiferous tubule epithelium | 2.71e-19 | 1 |
testis sex cord | 2.71e-19 | 1 |
genital ridge | 2.71e-19 | 1 |
primitive sex cord of indifferent gonad | 2.71e-19 | 1 |
coelomic epithelium | 2.71e-19 | 1 |
liver | 1.95e-15 | 19 |
digestive gland | 1.95e-15 | 19 |
liver bud | 1.95e-15 | 19 |
hepatic diverticulum | 2.20e-13 | 22 |
liver primordium | 2.20e-13 | 22 |
digestive tract diverticulum | 8.08e-13 | 23 |
epithelial sac | 8.02e-12 | 25 |
epithelium of foregut-midgut junction | 8.02e-12 | 25 |
anatomical boundary | 8.02e-12 | 25 |
hepatobiliary system | 8.02e-12 | 25 |
foregut-midgut junction | 8.02e-12 | 25 |
septum transversum | 8.02e-12 | 25 |
sac | 2.22e-11 | 26 |
epithelium of gonad | 2.49e-10 | 2 |
exocrine gland | 1.35e-09 | 31 |
exocrine system | 1.35e-09 | 31 |
endocrine gland | 1.56e-08 | 35 |