FFCP PHASE1:Hg19::chr2:89157785..89157798,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-301bp_to_X96754_5end | |||
|coexpression_cluster_id=C52 | |||
|description=CAGE_peak_1_at_X96754_5end | |||
|id=chr2:89157785..89157798,- | |||
|ontology_enrichment_celltype=CL:0000945!9.26e-51!24;CL:0000826!9.26e-51!24;CL:0000236!3.27e-50!14;CL:0000838!1.03e-27!52;CL:0000542!4.13e-27!53;CL:0000051!4.13e-27!53;CL:0000784!2.42e-16!3;CL:0000738!1.82e-12!140;CL:0002087!2.24e-12!119;CL:0000037!1.86e-11!172;CL:0000566!1.86e-11!172;CL:0000785!2.01e-11!2;CL:0000955!2.01e-11!2;CL:0000818!2.01e-11!2;CL:0000954!2.01e-11!2;CL:0000816!2.01e-11!2;CL:0000988!1.54e-10!182;CL:0002031!2.09e-10!124;CL:0000817!6.90e-08!3;CL:0002032!9.90e-08!165;CL:0000837!9.90e-08!165 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.13e-70;13!CL:0000945;6.19e-57;24!CL:0000784;9.24e-36;3!CL:0000542;4.00e-27;53!CL:0000946;3.99e-13;1!CL:0000785;3.99e-13;1!CL:0000819;3.99e-13;1!CL:0000786;3.99e-13;1!CL:0000451;3.18e-10;10!CL:0002087;3.87e-07;104!CL:0000738;6.19e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,4.27e-81,14;CL:0000945,5.88e-57,24;CL:0000826,5.88e-57,24;CL:0000838,3.82e-36,52;CL:0000784,8.72e-36,3;CL:0000542,1.96e-35,53;CL:0000051,1.96e-35,53;CL:0000785,2.34e-24,2;CL:0000955,2.34e-24,2;CL:0000818,2.34e-24,2;CL:0000954,2.34e-24,2;CL:0000816,2.34e-24,2;CL:0000738,6.63e-20,136;CL:0002087,6.44e-18,115;CL:0002031,4.20e-17,120;CL:0000817,1.37e-16,3;CL:0000037,9.08e-16,168;CL:0000988,7.17e-15,177;CL:0000946,3.33e-13,1;CL:0000786,3.33e-13,1;CL:0000980,3.33e-13,1;CL:0000819,6.06e-13,1;CL:0002032,2.63e-12,161;CL:0000837,2.63e-12,161;CL:0000451,3.14e-10,10 | |||
|ontology_enrichment_development_v019=CL:0000051;4.00e-27;53!CL:0000954;1.84e-24;2 | |||
|ontology_enrichment_disease=DOID:0060058!6.22e-18!10 | |||
|ontology_enrichment_disease_v019=DOID:0060073;3.99e-13;1!DOID:8675;3.99e-13;1!DOID:0060058;2.22e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,6.06e-13,1;DOID:8675,6.06e-13,1;DOID:0060058,2.55e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0002106!3.68e-07!3;UBERON:0004854!3.68e-07!3;UBERON:0009034!3.68e-07!3;UBERON:0002095!3.68e-07!3;UBERON:0004782!3.68e-07!3;UBERON:0003281!3.68e-07!3;UBERON:0009664!3.68e-07!3;UBERON:0002296!3.68e-07!3;UBERON:0005602!3.68e-07!3;UBERON:0001179!3.68e-07!3;UBERON:0006293!3.68e-07!3 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852139206383318,0.426507697462265,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.09227722252426,2.66852776159066,3.41384178053206,0.400395987036012,2.87376219977242,1.98313461835459,0.954053754535364,1.70763890732835,0,1.52909291250092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,2.38490624305342,2.28797964312051,2.97166001063652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.0448568774596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,2.18945747058799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36598618851383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508039992394707,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.74267916555066,3.0448149595224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7656157013387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@X96754 | |||
}} |
Revision as of 04:22, 21 January 2014
Short description: | p1@X96754 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_X96754_5end |
Coexpression cluster: | C52_adult_NK_chronic_cord_testis_embryonic_myeloma |
Association with transcript: | -301bp_to_X96754_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 4.27e-81 | 14 |
lymphocyte of B lineage | 5.88e-57 | 24 |
pro-B cell | 5.88e-57 | 24 |
lymphoid lineage restricted progenitor cell | 3.82e-36 | 52 |
plasmacytoid dendritic cell | 8.72e-36 | 3 |
lymphocyte | 1.96e-35 | 53 |
common lymphoid progenitor | 1.96e-35 | 53 |
mature B cell | 2.34e-24 | 2 |
pre-B-II cell | 2.34e-24 | 2 |
transitional stage B cell | 2.34e-24 | 2 |
small pre-B-II cell | 2.34e-24 | 2 |
immature B cell | 2.34e-24 | 2 |
leukocyte | 6.63e-20 | 136 |
nongranular leukocyte | 6.44e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 4.20e-17 | 120 |
precursor B cell | 1.37e-16 | 3 |
hematopoietic stem cell | 9.08e-16 | 168 |
hematopoietic cell | 7.17e-15 | 177 |
antibody secreting cell | 3.33e-13 | 1 |
plasma cell | 3.33e-13 | 1 |
plasmablast | 3.33e-13 | 1 |
B-1 B cell | 6.06e-13 | 1 |
hematopoietic oligopotent progenitor cell | 2.63e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.63e-12 | 161 |
dendritic cell | 3.14e-10 | 10 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 6.06e-13 | 1 |
lymphosarcoma | 6.06e-13 | 1 |
lymphoma | 2.55e-11 | 10 |