FFCP PHASE1:Hg19::chr2:167350627..167350640,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6332 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10594 | |||
|TSSclassifier=strong | |||
|UniProt=C9JII9 | |||
|association_with_transcript=74bp_to_ENST00000441411_5end | |||
|coexpression_cluster_id=C131 | |||
|description=CAGE_peak_4_at_SCN7A_5end | |||
|id=chr2:167350627..167350640,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.98e-11;4!UBERON:0007284;1.98e-11;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.00e-61!115;UBERON:0003103!1.08e-12!69;UBERON:0000481!1.23e-10!347;UBERON:0003075!2.13e-10!86;UBERON:0007284!2.13e-10!86;UBERON:0001049!4.93e-10!57;UBERON:0005068!4.93e-10!57;UBERON:0006241!4.93e-10!57;UBERON:0007135!4.93e-10!57;UBERON:0002346!1.19e-09!90;UBERON:0003076!1.60e-09!15;UBERON:0003057!1.60e-09!15;UBERON:0000062!4.00e-09!511;UBERON:0002298!1.56e-08!8;UBERON:0003978!1.88e-08!3;UBERON:0009751!1.88e-08!3;UBERON:0000946!1.88e-08!3;UBERON:0002523!1.88e-08!3;UBERON:0005983!1.88e-08!3;UBERON:0002165!1.88e-08!3;UBERON:0002062!1.88e-08!3;UBERON:0007280!1.88e-08!3;UBERON:0007100!2.86e-08!27;UBERON:0004151!4.75e-08!3;UBERON:0006947!1.40e-07!3;UBERON:0004054!1.40e-07!3;UBERON:0000468!1.61e-07!659;UBERON:0002240!2.34e-07!3;UBERON:0004111!2.71e-07!241;UBERON:0000477!2.92e-07!286;UBERON:0005743!3.01e-07!86;UBERON:0001017!5.92e-07!82;UBERON:0000922!8.25e-07!612;UBERON:0006331!9.11e-07!3;UBERON:0000073!9.23e-07!94;UBERON:0001016!9.23e-07!94;UBERON:0000467!9.82e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;4.42e-15;3!UBERON:0000946;4.42e-15;3!UBERON:0004151;2.97e-14;3!UBERON:0002133;1.87e-10;2!UBERON:0000341;3.43e-10;2!UBERON:0002081;3.43e-10;2!UBERON:0001829;7.66e-10;2!UBERON:0007100;2.52e-08;25!UBERON:0007023;1.01e-07;114!UBERON:0000948;3.24e-07;22!UBERON:0000922;4.43e-07;49!UBERON:0001723;5.19e-07;3!UBERON:0001033;5.19e-07;3!UBERON:0006947;7.80e-07;3!UBERON:0004054;7.80e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.36e-25,114;UBERON:0003978,3.76e-15,3;UBERON:0009751,3.76e-15,3;UBERON:0000946,3.76e-15,3;UBERON:0002523,3.76e-15,3;UBERON:0005983,3.76e-15,3;UBERON:0002165,3.76e-15,3;UBERON:0002062,3.76e-15,3;UBERON:0007280,3.76e-15,3;UBERON:0004151,2.32e-14,3;UBERON:0002133,1.59e-10,2;UBERON:0002081,2.79e-10,2;UBERON:0010227,2.79e-10,2;UBERON:0000341,5.84e-10,2;UBERON:0001829,9.20e-10,2;UBERON:0003103,1.07e-08,68;UBERON:0007100,1.05e-07,27;UBERON:0001723,4.97e-07,3;UBERON:0001033,4.97e-07,3;UBERON:0010056,4.97e-07,3;UBERON:0006947,6.72e-07,3;UBERON:0004054,6.72e-07,3;UBERON:0004797,9.89e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63723844372141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.22468147755661,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1396949401696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.70719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,1.10513566212459,0,0,0,0,0,0,0,1.08507746200627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,3.23191085715948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,1.32686346755009,0.611030144933625,0,0,0,0,8.82835412028668,0.234264445725339,0,0,0,1.57833761139756,1.20990716048664,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,4.26751672549045,0,0.677942222341597,0,0,0.126621591911757,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1262728597959,9.62473780849071,1.43574604915363,0.599037001496973,0.858452096273142,1.78537165953498,10.3462547629558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.209818352539992,0,0,0,3.57347663186684,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,13.989151046368,47.3184958349995,7.45630299624952,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.902523940191087,0,0,0,0,0,0.0675375846183947,0,0,0,0,1.09651553371436,1.48863353516788,0,0,0.535701835878287,0.336283722218824,0,0,0.266107110487916,0,0,0.135939465953663,0,0,0,4.23862701392776,0,0,0.913158720509496,0,0,1.85839014859306,0,0,0,0,0,0,0,0.860454717640555,0,0,1.27016115057279,0,0,0,0,0,0,0,0.102662806856247,2.3196288626764,1.45713297917742,0,0,0,0,0,0,0.617393264863557,0.655678681511872,0,0.735444965261716,0,0.588925401344836,1.18818560130834,0.8453114551668,0,0.469919589899268,0.128915775947154,0,0,0,0,2.19100916473955,1.37618785021362,0.573358332605805,0,0,0,5.290268405154,0,0,0,0,0,0,0,0,0,0,1.28823786971007,0,0,0.103432995861895,1.0661699095049,3.09483760902862,0.193766729508018,0.496597714366863,0,0.190941474834495,0.404234377916439,1.30630048738177,2.39563310759697,0.0673520530145875,0.860666464712116,3.65926392200615,0,0,0,0,0,4.88965776731466,1.22068853494722,0,0.603821380773079,0 | |||
|short_description=p4@SCN7A | |||
}} |
Revision as of 06:26, 21 January 2014
Short description: | p4@SCN7A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SCN7A_5end |
Coexpression cluster: | C131_lung_trachea_Alveolar_thyroid_umbilical_throat_skin |
Association with transcript: | 74bp_to_ENST00000441411_5end |
EntrezGene: | SCN7A |
HGNC: | 10594 |
UniProt: | C9JII9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 6.36e-25 | 114 |
valve | 3.76e-15 | 3 |
cardiac mesenchyme | 3.76e-15 | 3 |
cardial valve | 3.76e-15 | 3 |
tunica intima | 3.76e-15 | 3 |
heart layer | 3.76e-15 | 3 |
endocardium | 3.76e-15 | 3 |
endocardial cushion | 3.76e-15 | 3 |
presumptive endocardium | 3.76e-15 | 3 |
cardiac chamber | 2.32e-14 | 3 |
atrioventricular valve | 1.59e-10 | 2 |
cardiac atrium | 2.79e-10 | 2 |
future cardiac atrium | 2.79e-10 | 2 |
throat | 5.84e-10 | 2 |
major salivary gland | 9.20e-10 | 2 |
compound organ | 1.07e-08 | 68 |
primary circulatory organ | 1.05e-07 | 27 |
tongue | 4.97e-07 | 3 |
gustatory system | 4.97e-07 | 3 |
future tongue | 4.97e-07 | 3 |
male genital duct | 6.72e-07 | 3 |
internal male genitalia | 6.72e-07 | 3 |
blood vessel layer | 9.89e-07 | 7 |