FFCP PHASE1:Hg19::chr2:217236494..217236517,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57574 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29269 | |||
|TSSclassifier=weak | |||
|UniProt=Q9P2E8 | |||
|association_with_transcript=232bp_to_ENST00000273067,NM_020814,uc002vgb.2_5end | |||
|description=CAGE_peak_9_at_MARCH4_5end | |||
|id=chr2:217236494..217236517,- | |||
|ontology_enrichment_celltype=CL:0000057!6.53e-17!75;CL:0000222!1.39e-15!119;CL:0000055!9.52e-15!180;CL:0000213!1.00e-09!57;CL:0000215!1.00e-09!57;CL:0000359!1.89e-09!32;CL:0002620!7.89e-09!23;CL:0000220!3.95e-07!246;CL:1000413!4.83e-07!9;CL:0002321!6.48e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002592;2.46e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.21e-11,121;CL:0000213,2.64e-09,58;CL:0000215,2.64e-09,58;CL:0002592,1.63e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.89e-14;3!DOID:127;1.89e-14;3!DOID:0060072;5.78e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.41e-14,3;DOID:127,1.41e-14,3;DOID:0060072,4.64e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0001637!4.34e-17!42;UBERON:0003509!4.34e-17!42;UBERON:0004572!4.34e-17!42;UBERON:0000055!1.70e-16!69;UBERON:0001981!4.97e-15!60;UBERON:0007500!4.97e-15!60;UBERON:0004537!4.97e-15!60;UBERON:0006965!4.97e-15!60;UBERON:0002049!6.78e-15!79;UBERON:0007798!6.78e-15!79;UBERON:0004573!2.59e-13!33;UBERON:0004571!2.59e-13!33;UBERON:0004872!2.86e-13!84;UBERON:0003914!1.97e-11!118;UBERON:0004535!1.53e-10!110;UBERON:0001009!7.19e-10!113;UBERON:0000947!7.94e-10!21;UBERON:0010191!7.94e-10!21;UBERON:0000025!2.65e-09!194;UBERON:0004111!1.60e-08!241;UBERON:0000477!3.30e-07!286;UBERON:0003915!4.83e-07!9;UBERON:0004700!4.83e-07!9;UBERON:0001917!4.83e-07!9;UBERON:0000119!9.11e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.79e-08;33!UBERON:0004571;2.79e-08;33!UBERON:0001637;3.63e-08;42!UBERON:0003509;3.63e-08;42!UBERON:0004572;3.63e-08;42!UBERON:0000947;1.01e-07;21!UBERON:0010191;1.01e-07;21!UBERON:0003498;2.46e-07;3!UBERON:0005985;2.46e-07;3!UBERON:0001621;2.46e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,2.04e-10,33;UBERON:0004571,2.04e-10,33;UBERON:0001637,1.03e-09,42;UBERON:0003509,1.03e-09,42;UBERON:0004572,1.03e-09,42;UBERON:0000947,8.76e-08,21;UBERON:0010191,8.76e-08,21;UBERON:0000055,1.05e-07,68;UBERON:0001621,1.63e-07,3;UBERON:0004872,5.26e-07,83 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,1.0007329835313,0,0.872338524100369,2.53299878168311,0,0,0.245733936501509,0,0.873765488520689,0.791300934685361,0,0,0,0.602694528023977,1.46062018077475,0.487932798790507,0,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02290049474824,0.361439152384566,0,0.144846518960824,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,1.13061588384802,0.838998872419812,1.6507082516404,0.208994966536811,0.775250277507987,1.42306505074684,1.00416183829401,0,0,0,0.735326160691737,4.0507097394088,0.267899184852239,0,0,0,0.949265659568129,0.366403487860815,0,0,0,0,2.02608818663328,0.132409180813219,0.286836620748814,0.354668382198357,0.560677600142307,1.06748995729705,0.49333509683432,0,0.134710672069688,0,0,0,0.70296429550139,0,0.570471821544449,0.149448680551801,0.117434498643765,0,0.140450806702248,0,0.122834317311768,0,0,0.494533858557114,0.910161361938026,0,0.168336113954066,0.125118519871964,0.831192346452549,0,0,0.300476117813194,0.680593098960126,0.538168907066586,1.49490172172997,0,0.900273288253207,0,0.257640540045629,0.744467425326359,1.18143432568886,0.779496041289589,0.252433774244115,0.460249493211497,0.161646056818812,1.77504796258307,2.41805035746337,0.847802961552438,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0.185176890317059,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0.503946384596579,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.1466765716419,0.517086863031111,0,0,1.32969058292435,2.08014873822732,0,0,0.266422179016099,0,0.542621605391443,0,0,0,0,0.602878754119172,2.61460037580088,1.19967589418468,0,0,0,0,0,0,0.868687840005475,0,0.358121926479791,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,1.03985430765404,0.178428988797162,0.946214490203608,0.702848489956279,0,0,0,0,0,0.521301686808497,0,0,0,0,0,0,1.66435439510497,0,0.248107807818777,0.153461973288062,0.841980283299221,0.256278298511402,0,0.160853921143607,0,0.308419387605311,0,0.164254312027618,1.03850885836724,0.116210378459959,0,0.200506470303285,0,0.229628896329213,0.182091168006717,0.131124414959424,0.451199612907412,0.15403067420883,0,0,0.633309773357254,1.13733384070897,0.850468526382578,0.215915916102139,1.54227252690289,0,0,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.170453254832202,0,0,0.384380134730212,0,0,1.85938219718914,0.94443704049192,0,0.308033580176089,3.72614221221915,0,0.55597265731176,0,0,0,0.190630193923825,0,0,0,0,0,0,0,2.83055474202642,1.58510321173008,0,0,0.243713489631284,2.11300293513511,0,0,0,0.551365343546124,0.66343897524122,0.876901770507525,0.578775534266688,0,0.405820753925408,0.92947049429925,0,0.143411352204052,0.0982490410131212,0.7133421029625,0,0,0,0.379473173765715,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0.307160702099232,0,0,0.111308705022906,0,0,0,0,0,0,0,3.11039587661807,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54787429224455,0,0,0,0,0,0.225980740780532,0.274083849293502,0.19871461170299,0.126621591911757,0,0.480952921509202,0,0,0,0,0.171594997861965,0,0.745515213392595,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0.844802692155252,0,0.191915197319445,0,0,0.76280561296425,1.08599920350743,1.72844298240254,1.30634944043764,0,0,0,0.113312091520126,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.18628920882415,0,0,0,0,0.235265819698172,0,0.144921028610825,0,0.233713309847224,0,0,0,0,0.457680136793847,0,0,0,0.796483835818512,0.449803112163605,0,0,0.265841714557995,0,0,0,0.813741466409323,0,0.107410557042488,0,1.19428766609585,0,0,0.336749488765919,1.26184898228651,0,3.43106546199881,0.782982875895635,1.13352962756136,0.231522474323834,0,0.179088841081487,6.48483039038042,0,0.883445729729405,0.578742114812744,0.506827321959218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.862598491173454,0,0.109209638192014,0,0,0,0,0.954013051960256,0,0.80057074828547,0,0,0.192687675289379,0,0,0.41023272848151,0.252071696221718,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29280684514135,0,0.0675375846183947,0,0.206686796501184,0.19024743058172,0.546974809018219,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0.5968523254841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| |||
|short_description=p9@MARCH4 | |||
}} |
Revision as of 08:30, 21 January 2014
Short description: | p9@MARCH4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_MARCH4_5end |
Coexpression cluster: | NA |
Association with transcript: | 232bp_to_ENST00000273067, NM_020814, uc002vgb.2_5end |
EntrezGene: | MARCH4 |
HGNC: | 29269 |
UniProt: | Q9P2E8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.21e-11 | 121 |
lining cell | 2.64e-09 | 58 |
barrier cell | 2.64e-09 | 58 |
smooth muscle cell of the coronary artery | 1.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 2.04e-10 | 33 |
systemic arterial system | 2.04e-10 | 33 |
artery | 1.03e-09 | 42 |
arterial blood vessel | 1.03e-09 | 42 |
arterial system | 1.03e-09 | 42 |
aorta | 8.76e-08 | 21 |
aortic system | 8.76e-08 | 21 |
vessel | 1.05e-07 | 68 |
coronary artery | 1.63e-07 | 3 |
splanchnic layer of lateral plate mesoderm | 5.26e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.41e-14 | 3 |
leiomyoma | 1.41e-14 | 3 |
benign neoplasm | 4.64e-11 | 4 |