FFCP PHASE1:Hg19::chr21:40402573..40402602,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3124 | |||
|description=CAGE_peak_at_chr21:40402573..40402602,- | |||
|id=chr21:40402573..40402602,- | |||
|ontology_enrichment_celltype=CL:0002076!5.03e-22!43;CL:0000223!1.14e-16!59;CL:0002251!6.41e-12!21;CL:0002368!2.63e-09!13;CL:0000066!4.69e-08!254;CL:0002537!2.83e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002541;6.51e-34;3!CL:0000349;2.32e-21;19!CL:0002537;6.65e-21;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,6.51e-34,3;CL:0000349,2.32e-21,19;CL:0002537,6.65e-21,5 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.37e-13;2!UBERON:0010056;1.37e-13;2 | |||
|ontology_enrichment_disease=DOID:1749!7.93e-24!14;DOID:305!1.39e-12!106;DOID:0050687!1.01e-09!143;DOID:3119!2.79e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.41e-16;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.41e-16,14 | |||
|ontology_enrichment_uberon=UBERON:0000344!3.59e-10!12;UBERON:0003343!4.20e-09!4;UBERON:0004785!4.20e-09!4;UBERON:0005631!5.00e-09!14;UBERON:0000158!5.00e-09!14;UBERON:0004119!9.38e-09!169;UBERON:0000925!9.38e-09!169;UBERON:0006595!9.38e-09!169;UBERON:0001004!2.18e-07!72;UBERON:0003729!2.40e-07!5;UBERON:0000065!8.59e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;5.25e-40;10!UBERON:0000158;5.25e-40;10!UBERON:0003124;6.51e-34;3!UBERON:0000920;6.51e-34;3!UBERON:0003343;9.82e-26;4!UBERON:0004785;9.82e-26;4!UBERON:0000974;1.57e-17;6!UBERON:0000478;5.01e-17;24!UBERON:0000305;3.06e-15;7!UBERON:0004923;1.41e-11;55!UBERON:0001723;1.67e-09;3!UBERON:0001033;1.67e-09;3!UBERON:0003729;1.26e-08;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,6.51e-34,3;UBERON:0005631,9.03e-29,14;UBERON:0000158,9.03e-29,14;UBERON:0003343,1.11e-25,4;UBERON:0004785,1.11e-25,4;UBERON:0000478,5.01e-17,24;UBERON:0000305,3.06e-15,7;UBERON:0003124,3.53e-15,7;UBERON:0004923,1.15e-13,66;UBERON:0004871,1.83e-13,8;UBERON:0000974,6.61e-11,10;UBERON:0001723,1.81e-09,3;UBERON:0001033,1.81e-09,3;UBERON:0010056,1.81e-09,3;UBERON:0003729,1.31e-08,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576570202095319,1.65896526242959,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.05865624054073,0.296964680832639,2.76444631889309,0,0,0,0,0.844501632511974,0,0,0,0,0.123084805461069,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0.23056390438806,0.628303510868405,0,2.87101043758728,0,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0.489961987071888,0.261177619741208,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.28145398406564,0,0.733714394086716,1.61735932610474,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0.940634592723046,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0.186224142887574,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr21:40402573..40402602,- | |||
}} |
Revision as of 13:48, 21 January 2014
Short description: | p@chr21:40402573..40402602, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr21:40402573..40402602, - |
Coexpression cluster: | C3124_oral_chorionic_amniotic_Mammary_Small_gall_glassy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 6.51e-34 | 3 |
extraembryonic cell | 2.32e-21 | 19 |
amnion mesenchymal stem cell | 6.65e-21 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 6.51e-34 | 3 |
extraembryonic membrane | 9.03e-29 | 14 |
membranous layer | 9.03e-29 | 14 |
mucosa of oral region | 1.11e-25 | 4 |
respiratory system mucosa | 1.11e-25 | 4 |
extraembryonic structure | 5.01e-17 | 24 |
amnion | 3.06e-15 | 7 |
chorion | 3.53e-15 | 7 |
organ component layer | 1.15e-13 | 66 |
somatic layer of lateral plate mesoderm | 1.83e-13 | 8 |
neck | 6.61e-11 | 10 |
tongue | 1.81e-09 | 3 |
gustatory system | 1.81e-09 | 3 |
future tongue | 1.81e-09 | 3 |
mouth mucosa | 1.31e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.41e-16 | 14 |