FFCP PHASE1:Hg19::chr22:36718586..36718593,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C178 | |||
|description=CAGE_peak_at_chr22:36718586..36718593,- | |||
|id=chr22:36718586..36718593,- | |||
|ontology_enrichment_celltype=CL:1000306!1.04e-10!4;CL:0002547!1.04e-10!4 | |||
|ontology_enrichment_celltype_v019=CL:0002537;1.60e-14;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.83e-14,5 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.80e-38;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!7.64e-15!3;UBERON:0004854!7.64e-15!3;UBERON:0009034!7.64e-15!3;UBERON:0002095!7.64e-15!3;UBERON:0004782!7.64e-15!3;UBERON:0003281!7.64e-15!3;UBERON:0009664!7.64e-15!3;UBERON:0002296!7.64e-15!3;UBERON:0005602!7.64e-15!3;UBERON:0001179!7.64e-15!3;UBERON:0006293!7.64e-15!3;UBERON:0000415!1.04e-10!4;UBERON:0007240!1.04e-10!4;UBERON:0005742!1.04e-10!4;UBERON:0005734!1.04e-10!4;UBERON:0004664!1.04e-10!4;UBERON:0004663!1.04e-10!4;UBERON:0004177!7.46e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;9.74e-88;3!UBERON:0004177;2.86e-53;5!UBERON:0005057;2.86e-53;5!UBERON:0002075;9.05e-16;18!UBERON:0000077;6.56e-11;27!UBERON:0002405;6.56e-11;27!UBERON:0000305;8.99e-11;7!UBERON:0002390;2.79e-09;32!UBERON:0005631;6.13e-08;10!UBERON:0000158;6.13e-08;10!UBERON:0004458;7.91e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,6.24e-88,3;UBERON:0004854,6.24e-88,3;UBERON:0009034,6.24e-88,3;UBERON:0002095,6.24e-88,3;UBERON:0004782,6.24e-88,3;UBERON:0003281,6.24e-88,3;UBERON:0009664,6.24e-88,3;UBERON:0002296,6.24e-88,3;UBERON:0005602,6.24e-88,3;UBERON:0001179,6.24e-88,3;UBERON:0006293,6.24e-88,3;UBERON:0004177,1.49e-38,7;UBERON:0005057,1.49e-38,7;UBERON:0000945,6.50e-34,8;UBERON:0010039,6.50e-34,8;UBERON:0004457,4.59e-23,12;UBERON:0000042,4.59e-23,12;UBERON:0003887,4.59e-23,12;UBERON:0002075,8.40e-16,18;UBERON:0005409,2.63e-11,25;UBERON:0000305,9.89e-11,7;UBERON:0000077,2.96e-10,29;UBERON:0004923,4.66e-10,66;UBERON:0004871,1.47e-09,8;UBERON:0002323,7.30e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4097587696978,1.48253142339228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr22:36718586..36718593,- | |||
}} |
Revision as of 15:41, 21 January 2014
Short description: | p@chr22:36718586..36718593, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:36718586..36718593, - |
Coexpression cluster: | C178_spleen_liver_Hepatocyte_b_lymph_vein_thymus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.83e-14 | 5 |
Ontology term | p-value | n |
---|---|---|
spleen | 6.24e-88 | 3 |
gastrointestinal system mesentery | 6.24e-88 | 3 |
stomach region | 6.24e-88 | 3 |
mesentery | 6.24e-88 | 3 |
gastrointestinal system serosa | 6.24e-88 | 3 |
mesentery of stomach | 6.24e-88 | 3 |
gut mesentery | 6.24e-88 | 3 |
dorsal mesentery | 6.24e-88 | 3 |
dorsal mesogastrium | 6.24e-88 | 3 |
peritoneal cavity | 6.24e-88 | 3 |
spleen primordium | 6.24e-88 | 3 |
hemopoietic organ | 1.49e-38 | 7 |
immune organ | 1.49e-38 | 7 |
stomach | 6.50e-34 | 8 |
food storage organ | 6.50e-34 | 8 |
cavity lining | 4.59e-23 | 12 |
serous membrane | 4.59e-23 | 12 |
intraembryonic coelom | 4.59e-23 | 12 |
viscus | 8.40e-16 | 18 |
gastrointestinal system | 2.63e-11 | 25 |
amnion | 9.89e-11 | 7 |
mixed endoderm/mesoderm-derived structure | 2.96e-10 | 29 |
organ component layer | 4.66e-10 | 66 |
somatic layer of lateral plate mesoderm | 1.47e-09 | 8 |
body cavity | 7.30e-07 | 46 |