FFCP PHASE1:Hg19::chr3:157217292..157217303,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79674 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25735 | |||
|TSSclassifier=strong | |||
|UniProt=Q14D04 | |||
|association_with_transcript=39bp_to_ENST00000392832_5end | |||
|description=CAGE_peak_6_at_VEPH1_5end | |||
|id=chr3:157217292..157217303,- | |||
|ontology_enrichment_celltype=CL:0000066!1.64e-12!254;CL:0000039!4.25e-07!7;CL:0000586!4.25e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.86e-09;7!CL:0000586;2.86e-09;7!CL:1000415;2.31e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.80e-09,7;CL:0000586,2.80e-09,7;CL:1000415,2.31e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.46e-17;29!UBERON:0000358;8.02e-16;1 | |||
|ontology_enrichment_disease=DOID:305!1.03e-24!106;DOID:0050687!5.04e-19!143;DOID:162!5.93e-11!235;DOID:14566!1.99e-10!239 | |||
|ontology_enrichment_disease_v019=DOID:178;8.02e-16;1!DOID:326;8.02e-16;1!DOID:3978;8.02e-16;1!DOID:3394;8.02e-16;1!DOID:5844;8.02e-16;1!DOID:114;1.44e-08;2!DOID:305;1.63e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:178,6.44e-16,1;DOID:326,6.44e-16,1;DOID:3978,6.44e-16,1;DOID:3394,6.44e-16,1;DOID:5844,6.44e-16,1;DOID:305,2.64e-12,106;DOID:0050687,7.90e-11,143;DOID:114,1.29e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.94e-18!9;UBERON:0008947!1.79e-12!38;UBERON:0003258!1.79e-12!38;UBERON:0000063!3.06e-09!97;UBERON:0001557!6.21e-09!19;UBERON:0000065!1.94e-08!53;UBERON:0004921!4.07e-08!129;UBERON:0004185!4.07e-08!129;UBERON:0000072!4.93e-08!46;UBERON:0001007!1.51e-07!155;UBERON:0001555!1.51e-07!155;UBERON:0007026!1.51e-07!155;UBERON:0000077!1.75e-07!130;UBERON:0001004!3.84e-07!72;UBERON:0001048!7.33e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.07e-25;9!UBERON:0001557;3.07e-25;9!UBERON:0000072;1.80e-13;37!UBERON:0000065;6.44e-10;44!UBERON:0006562;1.44e-08;2!UBERON:0001004;9.84e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.89e-25,9;UBERON:0008947,4.99e-13,38;UBERON:0003258,4.99e-13,38;UBERON:0001557,3.70e-12,19;UBERON:0000072,1.74e-10,47;UBERON:0000065,4.33e-09,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397589304964456,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0.721879481669586,1.18306800039844,1.68584690078102,0.723033089650446,0.992645754591546,1.96091499683166,0.474541238222193,1.07865046528132,0.98110732562673,0.769494313892781,0,0,0,0,0,0,0,0,0.122988438543114,0.514703430895577,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0.128139149255701,0,0,0,0,0,0,0,0,0.241718899183244,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.206082023295445,0,0.165018999841176,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359473404589307,0.179021174675609,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.227586896570999,0.254253650292766,0,0,0,0,0,0,0,0,0,0.219385397153973,0.980446171670911,0.139423744278603,0,0,0.46112780877612,0,2.39024218228418,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.565412285735763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0.694238953340524,0,0.261177619741208,0.17472666824203,0,0.0967563312890851,0.146178634172371,0,0,0.794305140223502,0,0,0,0,1.56441106187842,0.320635281006135,0,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0.209205692624666,0,0,0,0,0,0,0,0,0,0,2.59582700648688,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0.482259445395058,0.412618309791701,1.66176135211674,0,0,0,0,0.394028536495991,0.209818352539992,0,0,1.15149118391667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684347351537318,0,0.747511887973863,0.471612915298998,0,0,0,0,0.638341257770182,0,0,0,0,0.314108192500469,0,0,0,0.573409195690071,0.887432412294818,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857766365499703,0,0,0,0,0,0.308801447160972,0.438568099157414,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,2.17196126987312,0,0,0.606965604236632,0.91064876540519,0,0,0,0.135939465953663,0,0.236387681767936,0.333694205676207,0,0,0.560544326627578,0,0.215927591218621,0,0.571812353413251,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12337913364836,0,0.458729283404541,0,0.157771562193185,0,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0.801652215796681,3.49200618232411,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0.162806537221949,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p6@VEPH1 | |||
}} |
Revision as of 22:17, 21 January 2014
Short description: | p6@VEPH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_VEPH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 39bp_to_ENST00000392832_5end |
EntrezGene: | VEPH1 |
HGNC: | 25735 |
UniProt: | Q14D04 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.80e-09 | 7 |
germ cell | 2.80e-09 | 7 |
epithelial cell of gall bladder | 2.31e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.89e-25 | 9 |
respiratory primordium | 4.99e-13 | 38 |
endoderm of foregut | 4.99e-13 | 38 |
upper respiratory tract | 3.70e-12 | 19 |
segment of respiratory tract | 1.74e-10 | 47 |
respiratory tract | 4.33e-09 | 54 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 6.44e-16 | 1 |
ischemia | 6.44e-16 | 1 |
extrinsic cardiomyopathy | 6.44e-16 | 1 |
myocardial ischemia | 6.44e-16 | 1 |
myocardial infarction | 6.44e-16 | 1 |
carcinoma | 2.64e-12 | 106 |
cell type cancer | 7.90e-11 | 143 |
heart disease | 1.29e-08 | 2 |