FFCP PHASE1:Hg19::chr4:2038275..2038288,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C201 | |||
|description=CAGE_peak_at_chr4:2038275..2038288,+ | |||
|id=chr4:2038275..2038288,+ | |||
|ontology_enrichment_celltype=CL:0002563!5.63e-15!4;CL:0002253!2.67e-08!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;5.13e-23;1 | |||
|ontology_enrichment_disease=DOID:3119!1.40e-09!14;DOID:4929!2.87e-08!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!1.56e-62!11;UBERON:0000160!5.44e-60!27;UBERON:0005409!1.80e-46!35;UBERON:0004907!3.96e-45!5;UBERON:0001155!1.48e-39!9;UBERON:0001052!3.86e-32!4;UBERON:0001046!1.84e-18!19;UBERON:0001154!1.54e-15!1;UBERON:0001153!1.54e-15!1;UBERON:0004913!3.17e-15!1;UBERON:0003703!3.17e-15!1;UBERON:0001174!3.17e-15!1;UBERON:0004914!3.17e-15!1;UBERON:0001242!5.63e-15!4;UBERON:0001262!5.63e-15!4;UBERON:0004786!5.63e-15!4;UBERON:0004808!5.63e-15!4;UBERON:0001277!5.63e-15!4;UBERON:0004921!1.71e-14!129;UBERON:0004185!1.71e-14!129;UBERON:0003350!3.54e-12!5;UBERON:0001007!7.27e-12!155;UBERON:0001555!7.27e-12!155;UBERON:0007026!7.27e-12!155;UBERON:0004119!8.85e-11!169;UBERON:0000925!8.85e-11!169;UBERON:0006595!8.85e-11!169;UBERON:0002108!3.49e-09!14;UBERON:0000485!3.67e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.94e-59;17!UBERON:0000059;8.43e-50;11!UBERON:0005409;1.45e-46;22!UBERON:0001155;2.19e-39;9!UBERON:0004921;4.59e-31;33!UBERON:0001154;5.13e-23;1!UBERON:0001153;5.13e-23;1!UBERON:0009854;5.13e-23;1!UBERON:0002108;9.47e-19;4!UBERON:0004907;2.30e-18;5!UBERON:0001555;9.11e-12;54!UBERON:0001007;1.14e-09;81!UBERON:0001052;9.63e-07;4!UBERON:0009856;9.63e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.63e-59,17;UBERON:0000059,6.89e-50,11;UBERON:0005409,2.90e-41,25;UBERON:0001155,1.98e-39,9;UBERON:0001154,5.13e-23,1;UBERON:0001153,5.13e-23,1;UBERON:0001045,5.13e-23,1;UBERON:0002108,9.47e-19,4;UBERON:0004907,2.11e-18,5;UBERON:0004921,5.76e-09,118;UBERON:0001007,2.90e-07,145;UBERON:0001555,2.90e-07,145;UBERON:0007026,2.90e-07,145;UBERON:0001052,9.11e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.36277837387947,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38141957765574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,9.95261931078505,2.0345239835768,6.72133159426988,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560544326627578,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.5598034391753,8.96094198066225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:2038275..2038288,+ | |||
}} |
Revision as of 23:51, 21 January 2014
Short description: | p@chr4:2038275..2038288, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:2038275..2038288, + |
Coexpression cluster: | C201_colon_small_adenocarcinoma_duodenum_temporal_signet_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.63e-59 | 17 |
large intestine | 6.89e-50 | 11 |
gastrointestinal system | 2.90e-41 | 25 |
colon | 1.98e-39 | 9 |
vermiform appendix | 5.13e-23 | 1 |
caecum | 5.13e-23 | 1 |
midgut | 5.13e-23 | 1 |
small intestine | 9.47e-19 | 4 |
lower digestive tract | 2.11e-18 | 5 |
subdivision of digestive tract | 5.76e-09 | 118 |
digestive system | 2.90e-07 | 145 |
digestive tract | 2.90e-07 | 145 |
primitive gut | 2.90e-07 | 145 |
rectum | 9.11e-07 | 4 |